STM4558 |
-7 |
58 |
24 |
30 |
12.74 |
GcvB |
36 |
91 |
63 |
69 |
14.51 |
-14.84 |
-42.09 |
-1.43883 |
UGCGAACAUGAACACGAUUUCUAUCCUCAGCACGACCGAUCUCCCCGCAGCCUGGCAGAUUGAGC&GCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
(((((((((((((((((..........((.((((((((.....((...((((...((((....((&))....))))...))))...))....)))))))).))))))))..))))))))))) |
UCACGACGCCGGCGUUUAAUGAACUCCGGGCAAACCCGGCGGCACGCGCCGCACUAUGGCAACAAAUCUGCGAACAUGAACACGAUUUCUAUCCUCAGCACGACCGAUCUCCCCGCAGCCUGGCAGAUUGAGCAACGCGCUCAUGCGUUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0104742 |
0.7883581 |
rimI |
1256084 |
ribosomal-protein-alanine N-acetyltransferase |
STM2096 |
18 |
30 |
24 |
30 |
4.12 |
GcvB |
152 |
164 |
152 |
158 |
1.44 |
-14.39 |
-19.95 |
-1.3952 |
UGGUAAGACAGGG&CCCUGUCUGUCCA |
(((..((((((((&))))))))..))) |
UACUCAAUGGGUAAACAAUGUUAAAAGUGGGGCGUAUCAGAGUUGGAUAGAACAGAACUAUGAAGGACGCCAGUAAUGAAUAUCUUACUUUUUGGUAAGACAGGGCAAGUAGGCUGGGAGUUGCAACGUUCUCUGGCACCGGUAGGGAAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0137672 |
0.7904009 |
rfbD |
1253617 |
dTDP-4-dehydrorhamnose reductase |
STM0412 |
27 |
72 |
27 |
33 |
5.33 |
GcvB |
35 |
73 |
67 |
73 |
10.95 |
-14.92 |
-31.2 |
-1.44659 |
ACAUUACUUCCGGCGAUGCCACCAGCCUAAAAACAGACCUGUCGCA&UGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGU |
(((((((..((......((((..((((((....((((.....((((&))))...)))).))))))..))))....))..))))))) |
GUCGUGGGUUACAACUUCUAAACCUGCAAAAAAGGCCAGAGGUCGUCCUCUGGCCCGUUUCGGGCGCAUGCUGCCAUGCGGCGGCGAGUCGCGCCCACUUCACAUUACUUCCGGCGAUGCCACCAGCCUAAAAACAGACCUGUCGCAAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.009969 |
0.7883581 |
|
2673775 |
putative inner membrane protein |
STM1129 |
-11 |
38 |
28 |
34 |
12.17 |
GcvB |
139 |
186 |
143 |
149 |
8.7 |
-15.3 |
-36.17 |
-1.48343 |
GGCGGAACUGGAUGUCACUAUUAGCCAGGCUGGAACAAAGUGUACACGA&UCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCC |
(((((..((..((.(((((((....(((((.((....(((((((((.((&)).)))))))))..)).)))))...)))))))...))..))..))))) |
UUUUGCUUGAUGUAGCAACACUCCAAGACAUAACAUAAAACGGAGCAAAACUUCAAAUAUAUAAGGCGGAACUGGAUGUCACUAUUAGCCAGGCUGGAACAAAGUGUACACGAAAACGGUGGGCUGAUUGUCUCAUGCCAACCGGUACCA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0078548 |
0.7711365 |
|
1252647 |
N-acetylmannosamine-6-phosphate 2-epimerase |
STM1287 |
4 |
34 |
28 |
34 |
7.83 |
GcvB |
47 |
79 |
47 |
53 |
9.82 |
-14.28 |
-31.93 |
-1.38453 |
AGCAUAGUAUUCAAUACCGUAGCCAAGCCCA&UGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUU |
((((((((((.((..((((((((((((((((&)))))))..))).))))))..)))))))))))) |
UGUUGCAAUGCUGGCUGAUAUCGCCCUGUCACGUCCCGCUUAUGCUAUACCCAUUCUUCACAGCGAGUAAGACGAAUGAGCAUAGUAUUCAAUACCGUAGCCAAGCCCAGCGGCAGUCUGUGUAACUUAUCCUGCAAGUACUGUUUCUAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0147012 |
0.7904009 |
|
1252805 |
anaerobic sulfatase maturase |
STM3786 |
27 |
38 |
30 |
36 |
0.47 |
GcvB |
178 |
189 |
180 |
186 |
2.94 |
-14.4 |
-17.81 |
-1.39617 |
UGUGGUGGUGUU&AGCACCGCCAUA |
((((((((((((&)))))))))))) |
UCCUGACAGGCCAGAACGUCGACAGUUAUAAAUUUACCGUUAUGAUGGGCAUCCUGUUUGGUGACGGAUGUGCGCAUGAUUUGGUUGAUUCUGGCCACGUUUGUGGUGGUGUUUAUUGUGGGGUUUCGGGUGCUGACAUCGGAUACCCGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.013685 |
0.7904009 |
yicN |
1255310 |
similar to E. coli orf hypothetical protein (AAC76686.1) Blastp hit to AAC76686.1 (159 aa) 82% identity in aa 10 - 159 |
STM1564 |
19 |
40 |
32 |
38 |
3.82 |
GcvB |
72 |
90 |
74 |
80 |
4.11 |
-16.06 |
-23.99 |
-1.55712 |
GCAAAUACCUCAGCAGCACAAC&GUUGUGUUGUUGUGUUUGC |
((((((((...(((((((((((&))))))))))))))))))) |
AAUAUUUGCCAUGCUGAAUACGAAUUAAUUUUCUGCGAGCCGUACUAAAUAAAUACAUGUUCACGGAGGCAUUAUAUGUUUACUUAUCACUCAGCAAAUACCUCAGCAGCACAACCGGCCCUGGUCAACGCGAUUGAACAAGGAUUACGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.004788 |
0.6975035 |
yddX |
1253082 |
biofilm-dependent modulation protein |
STM0516 |
31 |
40 |
32 |
38 |
3.24 |
GcvB |
154 |
163 |
156 |
162 |
1.28 |
-14.42 |
-18.94 |
-1.39811 |
GGACAGGCAG&CUGUCUGUCC |
((((((((((&)))))))))) |
UAUUGGCCUUCUUGCAUAAGAUGAACAUAUUGUUCAUUGUUUAUGCUCAUAUUUUGGGCCGGAGUUAACGUAAAUAUGACGGAAGUAAGACGACGCGGCAGGCCAGGACAGGCAGAGCCGACUGCGCAGAAAGGCGCUCAGGCGCUGGAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0135219 |
0.7904009 |
allR |
1252036 |
transcriptional regulator |
STM3236 |
25 |
40 |
34 |
40 |
5.36 |
GcvB |
154 |
169 |
154 |
160 |
2.34 |
-15.54 |
-23.24 |
-1.5067 |
CAAUGUGGACAGGCAG&CUGUCUGUCCAUAGUG |
((.(((((((((((((&))))))))))))).)) |
CCGGGCAGAAUAUCUGGCUAACAAUGCAGCGUCCAGCCCCUUAACAUAAAAGGAAGUAAAGAGAGGUUAAUAACGAUGAUUACGACCCGAACCGCCAAACAAUGUGGACAGGCAGACUACGGAUGGCUACAGGCCCGCUAUACCUUCUCC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0067362 |
0.7419678 |
yhaK |
1254759 |
similar to E. coli orf hypothetical protein (AAC76141.1) Blastp hit to AAC76141.1 (233 aa) 84% identity in aa 1 - 233 |
STM1179 |
22 |
44 |
38 |
44 |
7.1 |
GcvB |
35 |
58 |
35 |
41 |
5.79 |
-16.06 |
-28.95 |
-1.55712 |
GCCAAAACCGGUCUGGACGCGCA&UGCGUGUUCUGAUGGGCUUUUGGC |
(((((((((..((.(((((((((&))))))))).))..)).))))))) |
AGGUUAUCACCAGCGUAGAUGAGAACGAAGGGCGAGCUAACCAACUGCUGUCGAUGAGUUAAUACAGGACAUUUUAUGAUCAGUUCAUUAUGGAUCGCCAAAACCGGUCUGGACGCGCAGCAAACCAAUAUGGAUGUGAUUGCCAAUAAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.004788 |
0.6975035 |
flgG |
1252697 |
flagellar basal-body rod protein FlgG |