PA0613 |
-3 |
19 |
-3 |
4 |
7.73 |
PrrF1 |
102 |
119 |
113 |
119 |
2.23 |
-11.69 |
-21.65 |
-1.16575 |
ACCGUGAUCAAAGCCAUCGAUG&CAUCAGGCUAAUCACGGU |
((((((((...((((...((((&)))).)))).)))))))) |
CUGCCAGGACCGCCACGAGCGCCGUUGAACCGACCUCAUGCCGAGCCCUCGCGGGCAGUGAAAGGAGACACGACCGUGAUCAAAGCCAUCGAUGAAAUGCUCAAGCUCUGGGCCGAGGAAAUGCACGCGCCAGGCAGCAACGGAGGCGGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0187568 |
0.9556607 |
|
878382 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA1336 |
43 |
53 |
43 |
49 |
2.27 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.82 |
-16.32 |
-1.17871 |
ACCGUGAAGCC&GGCUAAUCACGGU |
(((((((((((&))))..))))))) |
CUGCCGGCCGUGCCGGAAAACCGCCCGCUCCGCCGCCCAUCGUGGCGGCGGGCUGGCCUAGCCGCGACGACUGUGAUGGAAUCCCCCGACCCGCCCUGCAGCGUACCUCCGUCACUGACCGUGAAGCCCCGCCUCGUCCGCCAGUUGCUG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0173922 |
0.9556607 |
|
879303 |
two-component sensor |
PA3032 |
-5 |
4 |
-5 |
2 |
0.28 |
PrrF1 |
101 |
109 |
103 |
109 |
2.11 |
-14.09 |
-16.48 |
-1.40508 |
GCCUGAUGA&UCAUCAGGC |
(((((((((&))))))))) |
CUGUCGCGGACCGCCGGGGUGUGGGGGUCGGGACGACGAGGCUCGGCGUUUCCUCAUAACGAAAGAGGACGCCUGAUGAAAACGCCCGCCUGGACGCGCCAUGCCCUCUGGGUCAUGCCGCUCGCCCUGGGGCUGCAAUCCGCCGUGGUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0042741 |
0.8860661 |
snr1 |
878993 |
cytochrome C Snr1 |
PA4792 |
42 |
53 |
46 |
52 |
5.18 |
PrrF1 |
73 |
84 |
74 |
80 |
5.45 |
-12.61 |
-23.24 |
-1.25749 |
GUCCGGCUGCGU&ACGCAGUCGGAC |
((((((((((((&)))))))))))) |
GAAACGCGGGUUUGAAGCGUCUCCACAAGUAACGUUGGCGAGCACCCGCCCUAUAGGGCGUGACGGGAGAAUGAAAUGAAUCGAAGUAUUGCGAUCCUGCUGCUGGGCCUGUCGCUGUCCGGCUGCGUCGAGGCACGCUCGGUGGUACCG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0108706 |
0.9556607 |
|
880463 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA4430 |
-16 |
4 |
-6 |
1 |
7.87 |
PrrF1 |
101 |
119 |
104 |
110 |
2.24 |
-11.46 |
-21.57 |
-1.14281 |
ACCAGGAGAAAGCCUGAUGA&UCAUCAGGCUAAUCACGGU |
(((..((...((((((((((&))))))))))..))..))) |
GAACCUGCCGAUUCCGCCUUAUACGUUCGAUGCUGACGACGUCAUCACCAUCGGCGUGGACCAGGAGAAAGCCUGAUGAACAAGUUCAUGGCUUGGGUCGAUGCGCGUUUUCCCGCGACCAAGAUGUGGGAAGACCAUCUGAGCAAGUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0214121 |
0.9556607 |
|
880944 |
cytochrome b |
PA3745 |
58 |
73 |
58 |
64 |
1.83 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.31 |
-15.37 |
-1.12785 |
ACCGUGACCAACAGCC&GGCUAAUCACGGU |
(((((((.....((((&))))..))))))) |
GAAUAUGCGGCCUUUCGGGCCGUGGGCCCAGCGUGCAUUCAUUUUGCAAGCACCGACUACAGGAACGAAGUUCACAUGGUAACCAUCCGUCUUGCUCGUGGCGGCUCCAAAAAGCGCCCCUUCUACCACCUGACCGUGACCAACAGCCGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0233235 |
0.9556607 |
rpsP |
880510 |
30S ribosomal protein S16 |
PA5043 |
-16 |
4 |
-8 |
-2 |
3.68 |
PrrF1 |
70 |
90 |
77 |
83 |
5.87 |
-11.77 |
-21.32 |
-1.17372 |
UGAGGAGUUUCGACUGAUGG&CCCACGCAGUCGGACUCUUCA |
(((((((.((((((((..((&))....))))))))))))))) |
GAAUGCCGGCGCCCUGGCCAGCGACGCUCCGGCGUUGAUGAUCGCCUGCGGCCUGGCGUUGAGGAGUUUCGACUGAUGGCACGGAUCAACCUUCUACCCUGGCGCGAAGAGCUGCGCGAGCAGCGCAAGCAGCAGUUCCUGGUGAUUCUU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0179059 |
0.9556607 |
pilN |
881025 |
type 4 fimbrial biogenesis protein PilN |
PA4456 |
-16 |
5 |
-4 |
3 |
5.39 |
PrrF1 |
100 |
119 |
102 |
108 |
2.24 |
-11.27 |
-18.9 |
-1.12386 |
AUCGCAAGGAGUCCUGAUGAG&CUCAUCAGGCUAAUCACGGU |
((((.....((.(((((((((&))))))))))).....)))) |
GACCCCUCCGGGAUGCGUGCCUUUGCAACGGGGCAAGGCGUCCAGCAUGGACGGGUCGCAUCGCAAGGAGUCCUGAUGAGCACCGAUAGUGCCUACGCGGUCGAGUUGAAGGGCCUGACCUUCAAGCGCGGAUCGCGGGCGAUUUUCGAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0238588 |
0.9556607 |
|
881000 |
ABC transporter ATP-binding protein |
PA0364 |
-26 |
-11 |
-18 |
-12 |
3.48 |
PrrF1 |
104 |
121 |
105 |
111 |
2.23 |
-12.21 |
-17.92 |
-1.2176 |
AAGCCGCCUAGCCUGA&UCAGGCUAAUCACGGUUU |
((((((..((((((((&))))))))....)))))) |
GACCGCCGAAGAUCGCUUGAGCCGCCCCCGGAACAAUACGAAGAGCCCGAAGCCGCCUAGCCUGAGAGUGCAUUCAUGCCUGUACCCGAUCUGUUCGCCGAGGGCCUCGCCCGCGGCUGGAAAACCUACAACGGCUCGCGCCUGGACGAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0138238 |
0.9556607 |
|
879858 |
oxidoreductase |
PA5489 |
-23 |
26 |
12 |
18 |
9.41 |
PrrF1 |
6 |
53 |
14 |
20 |
18.7 |
-11.08 |
-39.19 |
-1.10492 |
CUGACCUCGCCUAGGAGUGAACGAUGCGUAACCUGAUUCUCACCGCCAU&AUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAG |
((((.(((((((((((((((......(((((..(((((((((...((((&))))...)))))))))...)))))))))))..))))..))))).)))) |
GACCGCUCCCCCCGGUCGAACUGACCGGGCCGAACCCGGCCGGAGAGCGGCACUGACCUCGCCUAGGAGUGAACGAUGCGUAACCUGAUUCUCACCGCCAUGCUGGCCAUGGCCAGCCUGUUCGGCAUGGCCGCCCAGGCCGACGACUAU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0265569 |
0.9556607 |
dsbA |
877731 |
thiol:disulfide interchange protein DsbA |