PA1602 |
-52 |
-34 |
-41 |
-35 |
4.16 |
PrrF1 |
101 |
117 |
102 |
108 |
2.22 |
-11.94 |
-18.32 |
-1.19068 |
CGGGAUAUCCGCCUGAUGA&UCAUCAGGCUAAUCACG |
((.(((....(((((((((&)))))))))..))).)) |
CGCAUGCUACCAGGCACGGCUGACGGGAUAUCCGCCUGAUGAACAGCCAUGCCCCCGGCAUGGGGAGAAACCGCCAUGAGCGAUGCCCUUGCCCUGACCGUCAACGGUCAGUCCCUGCGCCUCGAUGUCGCCCCCGAUACCCCCCUGCUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0162137 |
0.9556607 |
|
881916 |
oxidoreductase |
PA3354 |
3 |
13 |
3 |
9 |
2.05 |
PrrF1 |
75 |
86 |
80 |
86 |
5.68 |
-11.95 |
-19.68 |
-1.19167 |
GAGUCCGACGC&GCAGUCGGACUC |
(((((((((((&)).))))))))) |
CGCGCCGCAGGCCGACGGUGCGACGCAGAACUGAACUCCGCUCGCCGCGGGAGCCGAUAGGCAGGAGAGGUUGCGAUGAGUCCGACGCUUUCCCUUCACCUGAUGGUGCGCAACCUGCCGCCCGGGCAGCGGCGGCCGAAGAUCGCCCAG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0161188 |
0.9556607 |
|
882521 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA0008 |
-46 |
-35 |
-42 |
-36 |
1.4 |
PrrF1 |
72 |
82 |
73 |
79 |
4.1 |
-11.87 |
-17.37 |
-1.1837 |
CCGAAUUGCGUG&CACGCAGUCGG |
(((.((((((((&))))))))))) |
CGCGCGCCUCGGCUUCCCCAUGGCCACCCCCGAAUUGCGUGACGAAGUACUGGCCAAGCUGAAGGAGGCCGAAUGAUGAGCGCCAAGGAUUUCCUGGUCGAACUGGGCACCGAAGAGCUGCCGCCAAAAGCCCUCAACAGCCUCGGCGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.016892 |
0.9556607 |
glyS |
878214 |
glycine--tRNA ligase subunit beta |
PA5070 |
13 |
29 |
23 |
29 |
3.11 |
PrrF1 |
104 |
121 |
104 |
110 |
2.23 |
-11.88 |
-17.22 |
-1.18469 |
AAACCCGAGCAGCCUGA&UCAGGCUAAUCACGGUUU |
(((((.((..(((((((&)))))))..))..))))) |
CGCGGACGCCGCGGCACCGCCGGCAGUCGCUGCCUCCACUCCCCCUUCGCCACCGUCCGAGACGCCGCGUAAUCCAUGAGCGCCGAUAAACCCGAGCAGCCUGAGCACGACCAGGAAAUGCCCCUGGUCUCGCACCUGACCGAACUGCGU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0167935 |
0.9556607 |
tatC |
879671 |
transporter TatC |
PA0916 |
-13 |
-1 |
-8 |
-2 |
2.41 |
PrrF1 |
107 |
119 |
108 |
114 |
2.23 |
-13.58 |
-18.22 |
-1.35422 |
ACCGAGGUUAGCC&GGCUAAUCACGGU |
((((.((((((((&)))))))).)))) |
CGCGGCGCUGCCGCUAGAAUUGCGCACUUUUUGAUCAGAGGCGCCAGCAAGCGCGCCCGCCUACCGAGGUUAGCCAUGUCCACCCCCACUCCCAAAGUCGGCUUCGUCAGUCUUGGAUGCCCCAAGGCGCUGGUCGACUCCGAGCGCAUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.005944 |
0.9377188 |
|
880629 |
ribosomal protein S12 methylthiotransferase RimO |
PA0483 |
25 |
40 |
28 |
34 |
3.91 |
PrrF1 |
40 |
54 |
45 |
51 |
8.07 |
-11.7 |
-23.68 |
-1.16674 |
GCCGAUCUCGCCGACC&GGUCGCGAGAUCAGC |
((.((((((((.((((&)))))))))))).)) |
CGCGGCGUCGCAGGAUGUUUCACUGCGCUGCGAGCGCCUUGCCUAUACUCCCGGAAUCGCCCCAGGAGCCUCGCCAUGCCCGUCCAUGCCGCAUCCCUCGCCGAUCUCGCCGACCUGGUUCCGCUGUUUUCCGCCUACCUCGACUUCUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0186484 |
0.9556607 |
|
879556 |
acetyltransferase |
PA2593 |
-75 |
-60 |
-75 |
-69 |
3.56 |
PrrF1 |
40 |
56 |
50 |
56 |
10.39 |
-12.25 |
-26.2 |
-1.22159 |
CGGCUGACCUGCGACC&GGUCGCGAGAUCAGCCG |
(((((((.((((((((&)))))).)).))))))) |
CGGCUGACCUGCGACCGAUAGAGAUACCUCUCCCCCAGGGCGGGAAAGCCCCGGGCAUGCCUGAUGGAGAAAACCAUGCUUAUCCAUUUCUGCCCCAGGCUGCUGACGCCUGCGGGGUUCGACCUGCCGUGCGAGUUGAUCGACAUCCGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0134985 |
0.9556607 |
qteE |
882299 |
quorum threshold expression protein QteE |
PA3621 |
44 |
55 |
46 |
52 |
2.52 |
PrrF1 |
71 |
82 |
74 |
80 |
4.1 |
-19.78 |
-26.4 |
-1.97249 |
CCGACUGCGUGG&CCACGCAGUCGG |
((((((((((((&)))))))))))) |
CGGGUCUGACGGACUACCGCACAAGCUGCUAGAAUCGCGCGCGCUUAGCCGCCCGCCUGAGGAGAGAACUAGAAAAUGACCUUCGUCGUCACCGACAACUGCAUCAAGUGCAAAUACACCGACUGCGUGGAAGUCUGCCCGGUAGACUGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
5.15e-05 |
0.1650844 |
fdxA |
880230 |
ferredoxin I |
PA1962 |
-75 |
-63 |
-71 |
-65 |
1.36 |
PrrF1 |
106 |
117 |
108 |
114 |
2.22 |
-12.5 |
-16.08 |
-1.24652 |
CGUCGAUUGGCCU&AGGCUAAUCACG |
(((.(((((((((&)))))))))))) |
CGUCGAUUGGCCUUGCCGGUAGGAUGCAAACCACUCGAUCGCCACACUGCGAUCCCCCACUUUCAGGAGCGAGACAUGAAACUUUUGCAUAUCGAUUCCAGCAUCCUCGGCGACGCCUCCGCUUCCCGCCAACUGAGCGCCGAGCUGGUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.011619 |
0.9556607 |
azoR2 |
877936 |
FMN-dependent NADH-azoreductase |
PA0596 |
-6 |
11 |
5 |
11 |
3.26 |
PrrF1 |
101 |
118 |
101 |
107 |
2.24 |
-12.42 |
-17.92 |
-1.23854 |
CCGUAAAUGUCUGAUGA&UCAUCAGGCUAAUCACGG |
((((....(((((((((&))))))))).....)))) |
CUCGAUGGGCUGAAAAAGAUGCUGGAUAAUAAAGCAUGACCUGCGCAACGGCUAGGGCCGUGGAGAACCCCGUAAAUGUCUGAUGAUGCCCGUUUCCAGCAGCUGAAUUGCUGGUUGGACUCUUGUUUGCCCGAGUUGUUCGUUGCCGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0121926 |
0.9556607 |
|
882000 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |