b4355 |
-74 |
-65 |
-73 |
-67 |
2.24 |
RyhB |
16 |
25 |
18 |
24 |
4.34 |
-13.09 |
-19.67 |
-1.37638 |
UCUCCGCGGG&CUCGCGGAGA |
((((((((((&)))))))))) |
AUCUCCGCGGGAUAUUCAUAAAGUUUUUCCUUUCCAGGCCGAAAAUCUUGCAUCGGUCCACAGGAAAGAGAAACCAUGUUAAAACGUAUCAAAAUUGUGACCAGCUUACUGCUGGUUUUGGCCGUUUUUGGCCUUUUACAACUGACAUCA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0091019 |
0.9291058 |
tsr |
948884 |
methyl-accepting chemotaxis protein I serine sensor receptor |
b4532 |
-9 |
18 |
-5 |
2 |
7.78 |
RyhB |
38 |
58 |
48 |
54 |
3.21 |
-13.67 |
-24.66 |
-1.43737 |
GGAGGCGAUGUGAAACAAAGCGAGUUC&GACAUUGCUCACAUUGCUUCC |
(((((((((((((......((((..((&))..))))))))))))))))) |
AUUUUCGAGCAAAUUACACACGGAGGUAAACACUAAUGUUUACUUUGUUGAUAUACUCAGCGGCAGGGAGGCGAUGUGAAACAAAGCGAGUUCAGACGUUGGCUCGAAUCUCAGGGCGUCGAUGUAGCGAAUGGCAGCAACCAUUUGAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0065776 |
0.9291058 |
hicA |
945989 |
mRNA interferase toxin of the HicAB toxin-antitoxin system |
b2253 |
-13 |
5 |
-2 |
5 |
4.92 |
RyhB |
38 |
58 |
38 |
44 |
3.21 |
-12.03 |
-20.16 |
-1.26493 |
GGAAGGAAAAGCAAUGUC&GACAUUGCUCACAUUGCUUCC |
(((((.((.(((((((((&)))))))))....)).))))) |
CAAAUGGCAAAAUAUACACAACACUCUUUAUAGCAAAUAUAAGUGGACAGGUAUUCAAUGGCGGAAGGAAAAGCAAUGUCAGAAUUUUUGCCUUUUUCGCGACCAGCAAUGGGCGUGGAGGAACUCGCUGCAGUUAAAGAGGUUCUCGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0162426 |
0.9496255 |
arnB |
947375 |
uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase PLP-dependent |
b3867 |
-13 |
5 |
-6 |
1 |
8.94 |
RyhB |
38 |
58 |
43 |
49 |
3.21 |
-10.87 |
-23.02 |
-1.14295 |
GGAAGGAGUGAGCAUGUC&GACAUUGCUCACAUUGCUUCC |
(((((..(((((((((((&)))).)))))))....))))) |
CAACCGGCUGAUGACCCGAAACGGGCAUCCGCCGGUACGCCGUAGCCGCCAGAGACGCCAUCGGAAGGAGUGAGCAUGUCUGUACAGCAAAUCGACUGGGAUCUGGCCCUGAUCCAGAAAUAUAACUAUUCCGGGCCACGAUACACCUCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0299579 |
0.9496255 |
hemN |
948362 |
coproporphyrinogen III oxidase SAM and NAD(P)H dependent oxygen-independent |
b0728 |
-74 |
-59 |
-66 |
-60 |
1.61 |
RyhB |
50 |
64 |
51 |
57 |
2.98 |
-10.97 |
-15.56 |
-1.15347 |
AAUGCCCGGAAGCGAU&AUUGCUUCCAGUAUU |
(((((..(((((((((&))))))))).))))) |
CAAUGCCCGGAAGCGAUACGAAAUAUUCGGUCUACGGUUUAAAAGAUAACGAUUACUGAAGGAUGGACAGAACACAUGAACUUACAUGAAUAUCAGGCAAAACAACUUUUUGCCCGCUAUGGCUUACCAGCACCGGUGGGUUAUGCCUGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0284439 |
0.9496255 |
sucC |
945312 |
succinyl-CoA synthetase beta subunit |
b2819 |
20 |
33 |
23 |
29 |
4.07 |
RyhB |
47 |
62 |
53 |
59 |
3.09 |
-12.43 |
-19.59 |
-1.30698 |
UACUGGAAGCUGUG&CACAUUGCUUCCAGUA |
((((((((((((((&))))..)))))))))) |
CACAACCCGACCCAACGCCGGGUUGAUUGCCCUGAUGGAUGAGAUGUUUGCCGGUAUGACCCUGGAGGAGGCGUAAUGAAAUUGCAAAAGCAAUUACUGGAAGCUGUGGAGCACAAACAGCUACGCCCGCUGGAUGUGCAAUUUGCCCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0130826 |
0.9496255 |
recD |
947287 |
exonuclease V (RecBCD complex) alpha chain |
b2736 |
56 |
71 |
56 |
62 |
3.84 |
RyhB |
38 |
59 |
53 |
59 |
3.27 |
-11.65 |
-18.76 |
-1.22497 |
UGGGAGCAGCACUGUC&GACAUUGCUCACAUUGCUUCCA |
(((((((((((.((((&)))).))))......))))))) |
CACCAUACCGUUAUCUUCCAGCGCUUAUAUUCACAAUAUCAAACAAAAUAUCACUUAAAUUAACAAGGAGAGCAGAUGAAAACGGGAUCUGAGUUUCAUGUCGGUAUCGUUGGCUUAGGGUCAAUGGGAAUGGGAGCAGCACUGUCAUAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0198994 |
0.9496255 |
ygbJ |
947200 |
putative dehydrogenase |
b1227 |
47 |
67 |
54 |
60 |
12.39 |
RyhB |
2 |
22 |
9 |
15 |
7.55 |
-13.21 |
-33.15 |
-1.389 |
CCGGGGCGGUCUUCCUGAUUG&CGAUCAGGAAGACCCUCGCGG |
((((((.((((((((((((((&))))))))))))))))).))) |
CACUGCGCAUCAGCGUCGCUUUGCCGGUGCCGUCGCGCCGCAAUAUCUGAAUAUCACCACCGGAGGACAGCACUAAUGCAAUUCCUGAAUAUGUUCUUCUUUGAUAUCUACCCGUACAUAGCCGGGGCGGUCUUCCUGAUUGGUAGCUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0085143 |
0.9291058 |
narI |
945808 |
nitrate reductase 1 gamma (cytochrome b(NR)) subunit |
b3391 |
-11 |
13 |
5 |
11 |
0.42 |
RyhB |
46 |
68 |
49 |
55 |
3.24 |
-11.42 |
-15.08 |
-1.20079 |
AGGAGAUACAAAUGAAGCAAUGGA&UCACAUUGCUUCCAGUAUUACUU |
(((..((((....(((((((((((&)).)))))))))..))))..))) |
CAGACGUACUAACGCUGGGUACCGGGACAAACUGCGAACCGCCACAAUGGUUGUGGCAACGGCAAGGAGAUACAAAUGAAGCAAUGGAUAGCCGCACUACUGUUGAUGCUGAUACCCGGCGUACAGGCGGCAAAGCCGCAAAAAGUGACG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0224751 |
0.9496255 |
hofQ |
947901 |
DNA catabolic putative fimbrial transporter |
b1269 |
-46 |
8 |
2 |
8 |
15.9 |
RyhB |
42 |
90 |
42 |
48 |
14.91 |
-11.89 |
-42.7 |
-1.2502 |
AAAAGCAUAUCAGACGCCUGGGAAGGCGACACCAAAAGGAAGCUCUAUGAGCGA&UUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
((((((....(((.(((((((...(((..........((((((....(((((((&)))))))....))))))...........)))..)))))))))))))))) |
CAGAUGUAAGUUCUGACUCACUGUUGCACAAAAGCAUAUCAGACGCCUGGGAAGGCGACACCAAAAGGAAGCUCUAUGAGCGAAAAGCUACAGAAAGUGCUGGCGCGUGCCGGCCACGGUUCUCGCCGUGAAAUCGAAUCUAUUAUUGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0175092 |
0.9496255 |
rluB |
945840 |
23S rRNA pseudouridine(2605) synthase |