b2264 |
43 |
51 |
44 |
50 |
0.81 |
RyhB |
52 |
60 |
53 |
59 |
2.88 |
-11.61 |
-15.3 |
-1.22076 |
CUGGAAGCA&UGCUUCCAG |
(((((((((&))))))))) |
CAUUACCGAUUCAUAUCAAUAAUCUAUUUUUGUAGCUCCUUAUACUUAGCCGCAAUAUUGAUACCGGACAAACUCAUGUCAGUAAGCGCAUUUAACCGACGCUGGGCGGCGGUCAUUCUGGAAGCAUUAACGCGUCACGGCGUCAGACAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0203264 |
0.9496255 |
menD |
946720 |
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase SEPHCHC synthase |
b3991 |
-75 |
-66 |
-75 |
-69 |
2.89 |
RyhB |
40 |
49 |
43 |
49 |
1.15 |
-13.4 |
-17.44 |
-1.40898 |
GUGAGCAGUG&CAUUGCUCAC |
((((((((((&)))))))))) |
GUGAGCAGUGGGCGCAACAUAUCGUGCAGGAUGGCGACCAGAUCCUGCUUUUUCAGGUUAUUGCAGGGGGUUGAAAUGUUACGUAUUGCGGACAAAACGUUUGAUUCACAUCUGUUUACCGGCACAGGGAAAUUCGCUUCUUCACAACUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0076567 |
0.9291058 |
thiG |
948493 |
thiamine biosynthesis ThiGH complex subunit |
b4355 |
-74 |
-65 |
-73 |
-67 |
2.24 |
RyhB |
16 |
25 |
18 |
24 |
4.34 |
-13.09 |
-19.67 |
-1.37638 |
UCUCCGCGGG&CUCGCGGAGA |
((((((((((&)))))))))) |
AUCUCCGCGGGAUAUUCAUAAAGUUUUUCCUUUCCAGGCCGAAAAUCUUGCAUCGGUCCACAGGAAAGAGAAACCAUGUUAAAACGUAUCAAAAUUGUGACCAGCUUACUGCUGGUUUUGGCCGUUUUUGGCCUUUUACAACUGACAUCA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0091019 |
0.9291058 |
tsr |
948884 |
methyl-accepting chemotaxis protein I serine sensor receptor |
b2283 |
-15 |
-6 |
-13 |
-7 |
0.75 |
RyhB |
52 |
61 |
53 |
59 |
2.88 |
-13.04 |
-16.67 |
-1.37112 |
ACUGGAAGCA&UGCUUCCAGU |
((((((((((&)))))))))) |
ACCUGCUGAAAGAGCGCUGGUAACCGAAUUUCGAUUAACGCUCAGUCUCUGACUGAGAAAACUGGAAGCAUGCUAAUGGCUACAAUUCAUGUAGACGGCAAAGAAUACGAGGUCAACGGAGCGGACAACCUGCUGGAAGCUUGUCUGUCU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0093579 |
0.9291058 |
nuoG |
946762 |
NADH:ubiquinone oxidoreductase chain G |
b1224 |
-50 |
-41 |
-48 |
-42 |
1.47 |
RyhB |
37 |
46 |
38 |
44 |
1.15 |
-12.19 |
-14.81 |
-1.28175 |
AGCAAUGUCG&CGACAUUGCU |
((((((((((&)))))))))) |
GAGCGUUACCUUGCCCUUAAACAUUAGCAAUGUCGAUUUAUCAGAGGGCCGACAGGCUCCCACAGGAGAAAACCGAUGAGUAAAUUCCUGGACCGGUUUCGCUACUUCAAACAGAAGGGUGAAACCUUUGCCGAUGGGCAUGGCCAGCUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0149008 |
0.9496255 |
narG |
945782 |
nitrate reductase 1 alpha subunit |
b3645 |
-7 |
3 |
-7 |
-1 |
3.42 |
RyhB |
40 |
49 |
43 |
49 |
1.15 |
-11.31 |
-15.88 |
-1.18922 |
GUGGGCAAUG&CAUUGCUCAC |
((((((((((&)))))))))) |
UGAGAUACUCACAACUGUAUAUAAAUACAGUUACAGAUUUACUUUCUUUGCAAUUGAUAUCACAUGGAGUGGGCAAUGAACGAACAUCAUCAACCUUUUGAAGAGAUAAAACUGAUUAAUGCAAACGGAGCAGAACAAUGGUCAGCAAGA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0238147 |
0.9496255 |
dinD |
948153 |
DNA damage-inducible protein |
b4111 |
-16 |
-7 |
-14 |
-8 |
4.65 |
RyhB |
15 |
24 |
16 |
22 |
4.34 |
-11.08 |
-20.07 |
-1.16503 |
CUCUGCGAGG&CCUCGCGGAG |
((((((((((&)))))))))) |
CCCGCUCCCCUUUUGCGGCCGUCGCGCUGAUUUUUCUGGCGUUUGCGGAAAUGGGCCAACUCUGCGAGGAAAGCUAUGCUGAAAAGGAAAAAAGUAAAACCGAUUACCCUUCGUGAUGUCACCAUUAUUGAUGACGGUAAACUGCGUAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0268612 |
0.9496255 |
proP |
948626 |
proline/glycine betaine transporter |
b2550 |
-75 |
-66 |
-72 |
-66 |
1.49 |
RyhB |
39 |
49 |
39 |
45 |
1.15 |
-11.07 |
-13.71 |
-1.16398 |
GUGGCAGUGU&ACAUUGCUCAC |
((((((((((&))))))).))) |
GUGGCAGUGUAUUGAACAAUCUGGCAAUGUUUUCGCGGAAUAAUCACGCAAUUAACUAAACAAGGUUUAGUGAAGAUGAGAGCCUGCAUUAAUAAUCAACAGAUUCGCCACCAUAACAAAUGCGUGAUUCUGGAACUGCUGUACCGGCAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0270016 |
0.9496255 |
yphH |
947023 |
putative DNA-binding transcriptional regulator |
b3084 |
-35 |
-25 |
-32 |
-26 |
2.76 |
RyhB |
37 |
47 |
38 |
44 |
1.15 |
-13.75 |
-17.66 |
-1.44578 |
GGGCAAUGUCG&CGACAUUGCUC |
(((((((((((&))))))))))) |
CGAAAAAGAGAAAAAGGGUAUACUCACGCACCCUUUUCAGGGGCAAUGUCGAAAUUUUAUCAUUCAGGAGGGCCGAUGAGCCACUUAGACAACGGUUUCCGUUCACUGACACUACAACGUUUUCCGGCGACGGAUGACGUUAACCCGCUA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0062866 |
0.9291058 |
rlmG |
947589 |
23S rRNA m(2)G1835 methyltransferase SAM-dependent |
b2799 |
-75 |
-65 |
-71 |
-65 |
1.36 |
RyhB |
56 |
66 |
56 |
62 |
2 |
-13.09 |
-16.45 |
-1.37638 |
GUAGUGCUGGA&UCCAGUAUUAC |
(((((((((((&))))))))))) |
GUAGUGCUGGAGAAAUUCAAAACCUAUGGGUUACGAAUUGAAGAGUAAUUUCGUAAAGCAACAAGGAGAAGGAUGAUGGCUAACAGAAUGAUUCUGAACGAAACGGCAUGGUUUGGUCGGGGUGCUGUUGGGGCUUUAACCGAUGAGGUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0091019 |
0.9291058 |
fucO |
947273 |
L-12-propanediol oxidoreductase |
b3928 |
30 |
40 |
33 |
39 |
2.04 |
RyhB |
51 |
61 |
52 |
58 |
2.88 |
-13.08 |
-18 |
-1.37533 |
ACUGGAAGCAA&UUGCUUCCAGU |
(((((((((((&))))))))))) |
UCGUAUUUAUUAAGGCGUCACCGGUAAUCGGGACGAGGAUUUUUAUCCAUCAACGCCUUGCAAUUCAGGAGAGGUAUGACAAUGUCAUUAGAAGUGUUUGAGAAACUGGAAGCAAAAGUACAGCAGGCGAUUGAUACCAUCACUCUGUUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0091526 |
0.9291058 |
zapB |
948420 |
FtsZ stabilizer septal ring assembly factor cell division stimulator |
b1044 |
63 |
73 |
66 |
72 |
2.88 |
RyhB |
52 |
62 |
53 |
59 |
2.88 |
-12.49 |
-18.25 |
-1.31329 |
UGCUGGAAGCA&UGCUUCCAGUA |
(((((((((((&))))))))))) |
GCUGCGAAUCAGCCAACCUGAAAGUAUGGAUAACACAACCCUCAAGGAUGACUAAUCAUUGAGGAAAUAGAAUAAAUGUUCAGACCUUUUUUAAACUCUCUUAUGCUCGGCAGUUUGUUUUUUCCUUUUAUUGCCAUUGCUGGAAGCACC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.012662 |
0.9496255 |
ymdA |
949012 |
uncharacterized protein |
b2727 |
-7 |
4 |
-6 |
1 |
4.77 |
RyhB |
39 |
49 |
42 |
48 |
1.15 |
-12.05 |
-17.97 |
-1.26703 |
GUGAGCGAUGU&ACAUUGCUCAC |
(((((((((((&))))))))))) |
CAUGGUGACAUGCUGCAGAUUGUGGCAGACGACGGUUUACAGAUUCGGCGGAUAGAAAUAGACCAGGAGUGAGCGAUGUGUACAACAUGCGGUUGCGGUGAAGGCAACCUGUAUAUCGAGGGUGAUGAACAUAACCCUCAUUCCGCGUUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0160688 |
0.9496255 |
hypB |
947194 |
GTP hydrolase involved in nickel liganding into hydrogenases |
b4281 |
-9 |
2 |
-7 |
-1 |
2.98 |
RyhB |
36 |
46 |
38 |
44 |
2 |
-10.82 |
-15.8 |
-1.1377 |
AGCAAUGUCGU&ACGACAUUGCU |
(((((((((((&))))))))))) |
CCCACAUACUUCGGCGUAAUAUCCAUCGGGACAGCCCGGAUAGGCCCAAUGGUCAGCUCAUCGGCCAGCAAUGUCGUGAACUGUGAGACGAAACAGCGUACACAGUUUGAAUGUAUCUACUUUUCCCAAUACUGGGCGAAGGGAGAUUUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0307429 |
0.9496255 |
yjhD |
948809 |
pseudogene KpLE2 phage-like element |
b1430 |
63 |
74 |
68 |
74 |
3.35 |
RyhB |
53 |
64 |
53 |
59 |
2.88 |
-13.44 |
-19.67 |
-1.41318 |
AGUACUGGAAGC&GCUUCCAGUAUU |
((((((((((((&)))))))))))) |
UUUUGCGCUUCUGAUGCAGGGAAAAUUGUUAGUCAGAACCGAGCGCGCCGUUUUAAUGAAAGCAGAGGACAAAGAAUGAUCAUUCGUGACGAAAACUAUUUUACUGAUAAAUAUGAAUUAACCCGCACACACUCUGAAGUACUGGAAGCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0074869 |
0.9291058 |
tehB |
945979 |
tellurite selenium methyltransferase SAM-dependent tellurite selenium resistance protein |
b2820 |
2 |
13 |
3 |
9 |
3.01 |
RyhB |
37 |
48 |
41 |
47 |
1.15 |
-12.36 |
-16.52 |
-1.29962 |
UGAGUGAUGUCG&CGACAUUGCUCA |
((((((((((((&)))))))))))) |
UACACCCUGAAGGCUGGAAAGUGUGGGAGAACGUCAGCGCGUUGCAGCAAACAAUGCCCCUGAUGAGUGAAAAGAAUGAGUGAUGUCGCCGAGACACUAGAUCCUUUGCGCUUGCCCUUACAGGGUGAGCGCCUGAUUGAAGCCUCUGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0135901 |
0.9496255 |
recB |
947286 |
exonuclease V (RecBCD complex) beta subunit |
b1778 |
-35 |
-24 |
-30 |
-24 |
2.52 |
RyhB |
43 |
54 |
43 |
49 |
3.19 |
-12.27 |
-17.98 |
-1.29016 |
GUAAUGUGAGCA&UGCUCACAUUGC |
((((((((((((&)))))))))))) |
UUUUGCCAGUUGGUGUUAAUGUUUUGUUAGAAUCAGUCACGUAAUGUGAGCACGAUUAAAGUGAGAUGUGAGCAAAUGGCUAAUAAACCUUCGGCAGAAGAACUGAAAAAAAAUUUGUCCGAGAUGCAGUUUUACGUGACGCAGAAUCAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0142698 |
0.9496255 |
msrB |
947188 |
methionine sulfoxide reductase B |
b2007 |
-72 |
-61 |
-71 |
-65 |
2.39 |
RyhB |
37 |
48 |
41 |
47 |
1.15 |
-11.62 |
-15.16 |
-1.22181 |
UGAGUAAUGUUG&CGACAUUGCUCA |
((((((((((((&)))))))))))) |
CUAUGAGUAAUGUUGGCCCUAACGAAUAGCGGUUGCUUAAACGAAUCCGACUCUCACAUUAUCAGGGGUAUAAAAAUGGAAACUACCAAGCCUUCAUUCCAGGACGUACUGGAAUUUGUUCGUCUGUUCCGUCGUAAGAACAAACUGCAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0202189 |
0.9496255 |
yeeX |
946541 |
UPF0265 family protein |
b2830 |
62 |
74 |
68 |
74 |
1.12 |
RyhB |
44 |
56 |
44 |
50 |
3.2 |
-13.5 |
-17.82 |
-1.41949 |
AGGUAAUGUGGGC&GCUCACAUUGCUU |
(((((((((((((&))))))))))))) |
GCAGAGAGUGGUUUACCGUCUUCCUGGAGUAUGAAACAAUCAUUCGUAUAUAAAGCUUUAUUUUGAGGUAGUCCGGUGAUUGAUGACGAUGGCUACCGCCCAAACGUAGGUAUCGUGAUUUGUAAUCGCCAGGGGCAGGUAAUGUGGGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0072388 |
0.9291058 |
rppH |
947300 |
RNA pyrophosphohydrolase |
b2714 |
60 |
72 |
66 |
72 |
7.05 |
RyhB |
26 |
38 |
26 |
32 |
5.77 |
-10.91 |
-23.73 |
-1.14716 |
CGUGCUUUCAGGU&ACCUGAAAGCACG |
(((((((((((((&))))))))))))) |
UCCCGCCGAUUGUGCAAGGACAAUCGGCAAACGGUGCAGUACACUGCGUUGAUUGCGUGUAAAGGGAUGAAAAUGAUGACGACGAUGCUGGAAGUGGCGAAGCGCGCCGGGGUUUCAAAAGCGACCGUUUCCCGCGUGCUUUCAGGUAAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0293435 |
0.9496255 |
ascG |
947305 |
asc operon transcriptional repressor prpBC operon repressor |
b2819 |
20 |
33 |
23 |
29 |
4.07 |
RyhB |
47 |
62 |
53 |
59 |
3.09 |
-12.43 |
-19.59 |
-1.30698 |
UACUGGAAGCUGUG&CACAUUGCUUCCAGUA |
((((((((((((((&))))..)))))))))) |
CACAACCCGACCCAACGCCGGGUUGAUUGCCCUGAUGGAUGAGAUGUUUGCCGGUAUGACCCUGGAGGAGGCGUAAUGAAAUUGCAAAAGCAAUUACUGGAAGCUGUGGAGCACAAACAGCUACGCCCGCUGGAUGUGCAAUUUGCCCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0130826 |
0.9496255 |
recD |
947287 |
exonuclease V (RecBCD complex) alpha chain |
b2155 |
-55 |
-41 |
-50 |
-44 |
3.08 |
RyhB |
41 |
57 |
44 |
50 |
3.2 |
-11.36 |
-17.64 |
-1.19448 |
GAAGAUGUGAGCGAU&AUUGCUCACAUUGCUUC |
(((((((((((((((&)))))))))))..)))) |
CGUACGCAAGGGGACGUGAAGAAGAUGUGAGCGAUAACCCAUUUUAUUUUCGUAGUUACCUCAUGGAGAUAUGGAAUGUUUAGGUUGAACCCUUUCGUACGGGUCGGGCUGUGUUUGUCCGCUAUUUCUUGUGCAUGGCCUGUGUUAGCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0231967 |
0.9496255 |
cirA |
949042 |
colicin IA outer membrane receptor and translocator ferric iron-catecholate transporter |
b3607 |
-11 |
7 |
-2 |
5 |
4.66 |
RyhB |
36 |
59 |
38 |
44 |
3.29 |
-13.23 |
-21.18 |
-1.3911 |
UGGAGUAAGCAAUGUCGU&ACGACAUUGCUCACAUUGCUUCCA |
((((((((((((((((((&))))))))))).....))).)))) |
AGGGAACCUUUGUUACCGCUAUGACCCGGCCCGCGCAGAACGGGCCGGUCAUUAUCUCAUCGUGUGGAGUAAGCAAUGUCGUGUGAAGAACUGGAAAUUGUCUGGAACAAUAUUAAAGCCGAAGCCAGAACGCUGGCGGACUGUGAGCCA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0084199 |
0.9291058 |
cysE |
948126 |
serine acetyltransferase |
b4348 |
-73 |
-53 |
-59 |
-53 |
7.54 |
RyhB |
40 |
66 |
40 |
46 |
3.3 |
-15.87 |
-26.71 |
-1.66869 |
GUGAACUGGGGGCGAGCGAUG&CAUUGCUCACAUUGCUUCCAGUAUUAC |
(((((((((((((((((((((&)))))))).....))))))))).)))) |
GCGUGAACUGGGGGCGAGCGAUGAGGCCGAUUUGCAGCGUCAGUUGCUGGAAGAAGCGUUUGGUGGGGUGAAGGAAUGAGUGCGGGGAAAUUGCCGGAGGGGUGGGUUAUCGCCCCAGUAUCUACGGUCACAACUCUAAUCCGAGGAGUA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0018209 |
0.7909534 |
hsdS |
948867 |
specificity determinant for hsdM and hsdR |
b2239 |
58 |
75 |
58 |
64 |
6.18 |
RyhB |
37 |
58 |
52 |
58 |
3.22 |
-11.5 |
-20.9 |
-1.2092 |
GGAAGCAGUGCAAUGGCG&CGACAUUGCUCACAUUGCUUCC |
(((((((((((((((.((&)).))))))....))))))))) |
UGUUGAUUGUUGUGAUGAUUGGCGAAAAACGUCGCCAUGAACAAUUACUGCAAGAACGCAACGGAGGCUAAUGGCAUGAAAUUGACGCUGAAAAACCUUAGCAUGGCGAUCAUGAUGAGCACUAUAGUCAUGGGAAGCAGUGCAAUGGCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0215456 |
0.9496255 |
glpQ |
946725 |
periplasmic glycerophosphodiester phosphodiesterase |
b1683 |
8 |
33 |
27 |
33 |
4.83 |
RyhB |
38 |
66 |
38 |
44 |
3.3 |
-21.41 |
-29.54 |
-2.25121 |
GUAAUACUGAAGCAACUGACGAUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUAC |
(((((((((((((((.((((((((((&))))))).)))..)))))).))))))))) |
GAUAUUCAAAUUUCACAACCCUAAAGCCCAGAAUGAAUGUGGCUGUGGCGAAAGCUUUGGGGUAUAGGCGGUACUAUGUCUCGUAAUACUGAAGCAACUGACGAUGUCAAAACCUGGACCGGCGGCCCGCUGAAUUAUAAAGAAGGAUUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
4.71e-05 |
0.1636725 |
sufB |
945753 |
component of SufBCD Fe-S cluster assembly scaffold |
b3010 |
-68 |
-29 |
-35 |
-29 |
12.31 |
RyhB |
38 |
86 |
38 |
44 |
14.91 |
-11.97 |
-39.19 |
-1.25862 |
GCCAGCGCCCUGGCUCUCAAUGCUCAUUUCUGCCAAUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGC |
(((((((((((((((...((((((((.......(((((((&))))))).......)).....))))))....)))))...)))))))))) |
UGUGAUCGCCAGCGCCCUGGCUCUCAAUGCUCAUUUCUGCCAAUGUCUUGCCUAUUUCUCCAGAGUGCUGGAGAAAUGCUACAAAAUUGCGCACAAUCAAAUUGCCGCAUUAUUCCUAAGAAAUUACGCGAUAUGAAACGUGAAGAGAUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0167745 |
0.9496255 |
yqhC |
947491 |
transcriptional activator of yqhD |
b0032 |
-16 |
-1 |
-16 |
-10 |
5.23 |
RyhB |
10 |
26 |
20 |
26 |
4.37 |
-11 |
-20.6 |
-1.15662 |
UUCUCUGGAGGGUGUU&AAGACCCUCGCGGAGAA |
(((((((((((((.((&)).)))))).))))))) |
AGAUUUGCAUUGAUUUACGUCAUCAUUGUGAAUUAAUAUGCAAAUAAAGUGAGUGAAUAUUCUCUGGAGGGUGUUUUGAUUAAGUCAGCGCUAUUGGUUCUGGAAGACGGAACCCAGUUUCACGGUCGGGCCAUAGGGGCAACAGGUUCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0280038 |
0.9496255 |
carA |
949025 |
carbamoyl phosphate synthetase small subunit glutamine amidotransferase |
b0722 |
-33 |
-15 |
-32 |
-26 |
4.14 |
RyhB |
22 |
41 |
34 |
40 |
6.69 |
-14.16 |
-24.99 |
-1.48889 |
UGUCGUGCUUUCACUUCUC&GAGAACCUGAAAGCACGACA |
(((((((((((((..((((&))))...))))))))))))) |
CGAAGCGGGUAAACGCUCCGCCAAAAUCUCCUUUGUUAUUACUGUCGUGCUUUCACUUCUCGCAGGAGUCCUCGUAUGGUAAGCAACGCCUCCGCAUUAGGACGCAAUGGCGUACAUGAUUUCAUCCUCGUUCGCGCUACCGCUAUCGUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0049771 |
0.9291058 |
sdhD |
945322 |
succinate dehydrogenase membrane subunit binds cytochrome b556 |
b4532 |
-9 |
18 |
-5 |
2 |
7.78 |
RyhB |
38 |
58 |
48 |
54 |
3.21 |
-13.67 |
-24.66 |
-1.43737 |
GGAGGCGAUGUGAAACAAAGCGAGUUC&GACAUUGCUCACAUUGCUUCC |
(((((((((((((......((((..((&))..))))))))))))))))) |
AUUUUCGAGCAAAUUACACACGGAGGUAAACACUAAUGUUUACUUUGUUGAUAUACUCAGCGGCAGGGAGGCGAUGUGAAACAAAGCGAGUUCAGACGUUGGCUCGAAUCUCAGGGCGUCGAUGUAGCGAAUGGCAGCAACCAUUUGAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0065776 |
0.9291058 |
hicA |
945989 |
mRNA interferase toxin of the HicAB toxin-antitoxin system |
b4255 |
-63 |
-43 |
-62 |
-56 |
5.2 |
RyhB |
39 |
59 |
52 |
58 |
3.27 |
-18.09 |
-26.56 |
-1.90212 |
UGGAGGCAAUGUCAGUGGUGU&ACAUUGCUCACAUUGCUUCCA |
((((((((((((.((((((((&)))))))).)))))))))))) |
UUGUCACAAAGGUGGAGGCAAUGUCAGUGGUGUGUGACAAUAAGAGUAUCGGCAGGACAUUAAGAGGAAUGAGCCAUGGCAAACCCGGAACAACUGGAAGAACAGCGUGAAGAAACACGUUUGAUUAUUGAAGAAUUACUGGAAGAUGGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0004554 |
0.3956288 |
rraB |
948773 |
protein inhibitor of RNase E |
b2211 |
-12 |
13 |
7 |
13 |
8.49 |
RyhB |
6 |
30 |
6 |
12 |
10.22 |
-11.41 |
-30.12 |
-1.19973 |
CGGGUUUUCUGCAUGGAACUUCUUG&CAGGAAGACCCUCGCGGAGAACCUG |
((((((((((((..((..(((((((&)))))))..))..)))))))))))) |
AAAUAAGAAUUAUUAUUGCUGUGCGCGCGAAGAUGUUUAAACUGCGGGCUGUAAUUCAUUGUCCGGGUUUUCUGCAUGGAACUUCUUGUACUUGUCUGGCGGCAGUAUCGCUGGCCAUUUAUCAGUGUGAUGGCGCUAAGCCUCGCCAGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0225939 |
0.9496255 |
yojI |
946705 |
microcin J25 efflux ABC transporter permease/ATPase |
b2230 |
-27 |
3 |
-27 |
-21 |
8.92 |
RyhB |
40 |
76 |
70 |
76 |
12.64 |
-12.71 |
-34.27 |
-1.33643 |
GGCUGGCUAUACACAAGGAAUGUGGCAAUG&CAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCC |
((((((((((((...((.((((((((((((&)))))).)))))).))....)))).....)))))))) |
UUUUGUCGUAUUAGGGCACGGUAAAGUUUGGCUGUGCCCGUAAAAAAUGGCUGGCUAUACACAAGGAAUGUGGCAAUGAGUGGUGAAAAAAAGGCGAAAGGCUGGCGGUUCUAUGGUCUUGUAGGUUUUGGCGCAAUAGCACUGCUUUCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0112262 |
0.9496255 |
yfaA |
946618 |
DUF2138 family protein putative host defense protein |
b0313 |
54 |
75 |
56 |
62 |
0.92 |
RyhB |
40 |
61 |
53 |
59 |
3.3 |
-15.35 |
-19.57 |
-1.61401 |
ACUGGAAGCAAUAAAUGAAGUG&CAUUGCUCACAUUGCUUCCAGU |
((((((((((((......((((&))))......)))))))))))) |
GACACAUUUUAUAUUGAACGUCCAAUCAAUAACCGCUUUAAUAGAUAAACACCGCUGAUGAAUGGAGUGGCGAAAAUGCCCAAAUUGGGGAUGCAGUCGAUCCGGCGCAGACAACUGAUCGACGCCACACUGGAAGCAAUAAAUGAAGUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0024857 |
0.8637808 |
betI |
944981 |
choline-inducible betIBA-betT divergent operon transcriptional repressor |
b2736 |
56 |
71 |
56 |
62 |
3.84 |
RyhB |
38 |
59 |
53 |
59 |
3.27 |
-11.65 |
-18.76 |
-1.22497 |
UGGGAGCAGCACUGUC&GACAUUGCUCACAUUGCUUCCA |
(((((((((((.((((&)))).))))......))))))) |
CACCAUACCGUUAUCUUCCAGCGCUUAUAUUCACAAUAUCAAACAAAAUAUCACUUAAAUUAACAAGGAGAGCAGAUGAAAACGGGAUCUGAGUUUCAUGUCGGUAUCGUUGGCUUAGGGUCAAUGGGAAUGGGAGCAGCACUGUCAUAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0198994 |
0.9496255 |
ygbJ |
947200 |
putative dehydrogenase |
b2823 |
42 |
60 |
42 |
48 |
6.85 |
RyhB |
40 |
58 |
52 |
58 |
3.21 |
-14.06 |
-24.12 |
-1.47837 |
GGAGGUAAUGUUGGCGAUG&CAUUGCUCACAUUGCUUCC |
(((((((((((..((((((&))))))..))))))))))) |
CGAAGUCAUUGAUGGAAACAUUGUUUUUUCGCCACGCGGCUGGAGCGAUUUUUGUCCGCUGAAAGAGAGGGCGUUAUGUCAGCUUCCCUGAAGAAUCAACAAGGCUUUAGCCUGCCGGAGGUAAUGUUGGCGAUGGUGUUGAUGGUGAUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0052703 |
0.9291058 |
ppdC |
945797 |
putative prepilin peptidase-dependent protein |
b4176 |
18 |
67 |
41 |
47 |
18.12 |
RyhB |
31 |
86 |
56 |
62 |
18.89 |
-13.5 |
-50.51 |
-1.41949 |
GCUGGCGCUUGCCCUGGUUUUGGUACUGGAAGGUUUAGGGCCGAUGCUUU&AAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGC |
(((((((((((..((((((.((((((((((((.....((((((.((((((&)))))))).....))))......))))))))))))...)))))).))))))))))) |
GACUGCGGUACAGGUCAAUAAAGCCACCGCAUCCUCAGGGAUGUCGGUGGUUUUCUUUUUCUAUAAGGAUAAUGAAUGAAUUCGACAAUCUGGCUGGCGCUUGCCCUGGUUUUGGUACUGGAAGGUUUAGGGCCGAUGCUUUACCCGAAG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0072388 |
0.9291058 |
yjeT |
948696 |
DUF2065 family protein |
b2563 |
-20 |
16 |
-16 |
-10 |
9.76 |
RyhB |
25 |
63 |
53 |
59 |
7.98 |
-13.42 |
-31.16 |
-1.41108 |
AUGCUGGAAGCGCGUGGCUAAUGGCAAUAUUAGGUU&AACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAU |
(((((((((((..(((((.((((......(((((((&)))))))........)))))).)))...))))))))))) |
UGGUCGUGCAGUGAUGACCGGACUGAAAGAUGCGGUGGCAGAAAUGAAGCGUCUGAUGCUGGAAGCGCGUGGCUAAUGGCAAUAUUAGGUUUAGGCACGGAUAUUGUGGAGAUCGCUCGCAUCGAAGCGGUGAUCGCCCGAUCCGGUGAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0075713 |
0.9291058 |
acpS |
947037 |
holo-[acyl-carrier-protein] synthase 1 |
b0681 |
57 |
71 |
58 |
64 |
3.86 |
RyhB |
32 |
46 |
39 |
45 |
5.54 |
-10.92 |
-20.32 |
-1.14821 |
AGCAAUGUCGGGCUU&AAGCACGACAUUGCU |
((((((((((.((((&)))).)))))))))) |
CGCUACUUUUUUAAUUUUUAUUUUUUCGCUGUUCACCUUUGGUGCAGCAAUUUAUACGUCAAAGAGGAUUAACCCAUGCGUACGUUUAGUGGCAAACGUAGUACGCUGGCGCUGGCUAUCGCCGGUGUUACAGCAAUGUCGGGCUUUAUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0291917 |
0.9496255 |
chiP |
945296 |
chitoporin uptake of chitosugars |
b3885 |
56 |
75 |
59 |
65 |
6.61 |
RyhB |
41 |
62 |
53 |
59 |
3.3 |
-15.48 |
-25.39 |
-1.62768 |
UGCUGGGAGCCUGGAGCGAU&AUUGCUCACAUUGCUUCCAGUA |
((((((((((.(((((((((&))))))).))..)))))))))) |
UUCAUACCUUGCCACAUAGCCAAACCCAUCCUUUCCCGCUACAGUUAAUUUCUUGUGGCGCGAAAGGAGGCAAAAAUGCUCUAUAUCUUUGAUUUAGGUAAUGUGAUUGUCGAUAUCGACUUUAACCGUGUGCUGGGAGCCUGGAGCGAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0023007 |
0.8637808 |
yihX |
948380 |
alpha-D-glucose-1-phosphate phosphatase anomer-specific |
b4469 |
-11 |
12 |
-10 |
-4 |
5.61 |
RyhB |
38 |
60 |
53 |
59 |
3.3 |
-13.54 |
-22.45 |
-1.4237 |
CUGGAAGCAAAAUGAGCUCUAUC&GACAUUGCUCACAUUGCUUCCAG |
((((((((((...((((....((&))....))))...)))))))))) |
ACCUUUCGAUUUCUCUUUCGUUCCGGCUUAUAAUCCCCGGCCUUUGAUUAUUUUUUUAUCAUUUCUGGAAGCAAAAUGAGCUCUAUCUCCCUGAUCCAACCGGAUCGCGACCUGUUCUCCUGGCCGCAGUACUGGGCCGCCUGUUUUGGA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0070778 |
0.9291058 |
ygiQ |
948963 |
Radical SAM superfamily protein |
b1120 |
-17 |
5 |
-7 |
-1 |
9.07 |
RyhB |
46 |
68 |
52 |
58 |
3.24 |
-14.88 |
-27.19 |
-1.5646 |
AAGUGGUGCCGGAAGCAAUGGA&UCACAUUGCUUCCAGUAUUACUU |
(((((((((.((((((((((((&)).)))))))))).))))))))) |
CGUAAAAAUAAACGCCGCCUGCGCGAGCGUUUGCGUCAGCGUAUUUUUUUCAGAGAUAAAGUGGUGCCGGAAGCAAUGGAAAAACCAAGAGUACUCGUACUGACAGGGGCAGGAAUUUCUGCGGAAUCAGGUAUUCGUACCUUUCGCGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0032796 |
0.9291058 |
cobB |
945687 |
deacetylase of acs and cheY chemotaxis regulator |
b2135 |
-9 |
27 |
21 |
27 |
15.71 |
RyhB |
21 |
58 |
21 |
27 |
7.91 |
-11.14 |
-34.76 |
-1.17134 |
GGGGGCGGUAUGAGCCAUGUCUGGGGACUGUUUUCC&GGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCC |
(((((((((.(((((.(((((((......(((((((&))))))).......)).))))).))))).))))))))) |
GGGCGAACAAAAAAUAAUCACAAGCUGACUUAUACUUGAACUGUCAGGUUCAUGAACUCACAACAAGGGGGCGGUAUGAGCCAUGUCUGGGGACUGUUUUCCCAUCCCGAUCGUGAAAUGCAGGUGAUUAAUCGCGAAAACGAAACGAUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.026033 |
0.9496255 |
yohC |
946666 |
Yip1 family inner membrane protein |
b3492 |
-66 |
-42 |
-64 |
-58 |
5.23 |
RyhB |
42 |
65 |
57 |
63 |
3.3 |
-10.96 |
-19.49 |
-1.15242 |
UGAUGCUGGUGCGACCACUGAGGAA&UUGCUCACAUUGCUUCCAGUAUUA |
(((((((((.((((....((((.((&)).))))..))))..))))))))) |
UAGUAAUAUUGAUGCUGGUGCGACCACUGAGGAAUCUUUACAAUUCACGCCCGUUUUUUCUAAGAGGAGCGCAACGUGGAAAGGUUUGAUGCCAUUAUUAUAGGCGCUGGUGCGGCGGGUAUGUUCUGUUCUGCGCUGGCAGGUCAGGCA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.028592 |
0.9496255 |
yhiN |
947996 |
putative oxidoreductase |
b3219 |
-10 |
11 |
-9 |
-3 |
4.85 |
RyhB |
39 |
59 |
52 |
58 |
3.27 |
-12.48 |
-20.6 |
-1.31224 |
UGGAGGCAAAAUGAACAAUGU&ACAUUGCUCACAUUGCUUCCA |
(((((((((..((..((((((&))))))..))..))))))))) |
AGCUUUUAAGGAUGAAGGGGAACUAACCGACAUGACAGAUAUUACAGGCAAUCUGACGGUCCUGGUGGAGGCAAAAUGAACAAUGUAAAAUUACUGAUUGCCGGAAGUGCCUUUUUUGCCAUGUCAGCGCAAGCCGCUGAUAGAGUAUCA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0127312 |
0.9496255 |
yhcF |
947735 |
putative transcriptional regulator |
b3743 |
40 |
66 |
42 |
48 |
7.94 |
RyhB |
34 |
60 |
52 |
58 |
6.76 |
-19.68 |
-34.38 |
-2.0693 |
CUGGAAGCAUUAAUGGGCAAUGCGCGC&GCACGACAUUGCUCACAUUGCUUCCAG |
(((((((((....(((((((((((.((&)).)).)))))))))...))))))))) |
AGCCUAACUCACUUUUGAUUCAUUAAAAAAGAAGGCUAAAAUAGAAUGAAUCAUCAAUCCGCAUAAGAAAAUCCUAUGGAAAAUUAUCUGAUCGACAAUCUGGACCGUGGCAUCCUGGAAGCAUUAAUGGGCAAUGCGCGCACCGCUUAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0001586 |
0.1837117 |
asnC |
948259 |
transcriptional activator of asnA autorepressor |
b4019 |
-10 |
7 |
-1 |
6 |
4.63 |
RyhB |
43 |
58 |
44 |
50 |
3.2 |
-16.82 |
-24.65 |
-1.76858 |
GGGAGCAAGUGUGAGCA&UGCUCACAUUGCUUCC |
((((((((.((((((((&)))))))))))))))) |
UACCACAGAUGCGUUUAUGCCAGUAUGGUUUGUUGAAUUUUUAUUAAAUCUGGGUUGAGCGUGUCGGGAGCAAGUGUGAGCAGCAAAGUGGAACAACUGCGUGCGCAGUUAAAUGAACGUAUUCUGGUGCUGGACGGCGGUAUGGGCACC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.001018 |
0.5895917 |
metH |
948522 |
homocysteine-N5-methyltetrahydrofolate transmethylase B12-dependent |
b0894 |
-38 |
-18 |
-24 |
-18 |
3.25 |
RyhB |
43 |
62 |
43 |
49 |
3.3 |
-19.93 |
-26.48 |
-2.09559 |
UACUGGAAUCAAUCGUGAGCA&UGCUCACAUUGCUUCCAGUA |
((((((((.((((.(((((((&))))))))))).)))))))) |
CGAACUGCUAUAGAAAUAAUUACACAAUACGGUUUGUUACUGGAAUCAAUCGUGAGCAAGCUUGAGUGAGCCAUUAUGAAAACGAAAAUCCCUGAUGCGGUAUUGGCUGCUGAGGUGAGUCGCCGUGGUUUGGUAAAAACGACAGCGAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0001337 |
0.1837117 |
dmsA |
945508 |
dimethyl sulfoxide reductase anaerobic subunit A |
b0896 |
51 |
69 |
52 |
58 |
3.7 |
RyhB |
36 |
54 |
47 |
53 |
3.22 |
-12.7 |
-19.62 |
-1.33537 |
GCAAUGUGUAGCAGGUGGU&ACGACAUUGCUCACAUUGC |
((((((((.((((.((.((&)).))..)))))))))))) |
UGAUCAAACCCAAUGCCAAUAGCCGCCCGACCGGGGAUACCACUGGCUAUCUGGCAAACCCGAAGGAGGUGUGAGAUGGGAAGUGGAUGGCAUGAAUGGCCGCUGAUGAUCUUCACGGUCUUCGGGCAAUGUGUAGCAGGUGGUUUUAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.011288 |
0.9496255 |
dmsC |
945502 |
dimethyl sulfoxide reductase anaerobic subunit C |
b1342 |
-10 |
11 |
-10 |
-4 |
7.12 |
RyhB |
41 |
59 |
53 |
59 |
3.27 |
-12.25 |
-22.64 |
-1.28806 |
UGGAGGCACUGUGGAAGCGAU&AUUGCUCACAUUGCUUCCA |
((((((((.((((..((((((&)))))))))).)))))))) |
AAUGGGGUGAUGAGAUGUUGCGUAACAGGGCCAGAAGGCUAGACUACAAAAUAAUGCGUUGAUGAUGGAGGCACUGUGGAAGCGAUUAAGGGAUCGGACGUUAAUGUCCCGGAUGCAGUAUUUGCCUGGAUGCUGGAUGGUAGAGGCGGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0144251 |
0.9496255 |
ydaN |
945910 |
putative Zn(II) transporter |
b0613 |
-18 |
6 |
-17 |
-11 |
11.25 |
RyhB |
37 |
59 |
52 |
58 |
3.29 |
-13.15 |
-27.69 |
-1.38269 |
UGGAGGCACUGCUGAACGAUGUCG&CGACAUUGCUCACAUUGCUUCCA |
((((((((.((.(((.((((((((&)))))))).))))).)))))))) |
GCGCAGCCGUCUGCGCGCGUGGAAAAACCCAUCAACUGACCGAUUUACUCAACCGCAUGGAGGCACUGCUGAACGAUGUCGAUGCCUGCAACGUCAACUAAAACCACAAAGCUUGCGACGUCAUUAAUCGAUGAGUACGCCCUGCUGGGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0088035 |
0.9291058 |
citG |
946395 |
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase |
b2095 |
-73 |
-39 |
-73 |
-67 |
12.38 |
RyhB |
14 |
49 |
43 |
49 |
10.32 |
-11.15 |
-33.85 |
-1.1724 |
GUGAGCAAAGUGAUUGCCGAUUGUGGCUGCGAGGG&CCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCAC |
((((((((.((...(((.....((..(((((((((&)))))))))...))......)))..)).)))))))) |
UGGUGAGCAAAGUGAUUGCCGAUUGUGGCUGCGAGGGCAGGGCAUAACGCACCUGCCAUUUAACAAGGAAAAAACAUGAAAACGUUAAUUGCCCGGCAUAAAGCUGGUGAACAUAUCGGCAUAUGUUCAGUCUGUUCUGCCCAUCCGUUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0258974 |
0.9496255 |
gatZ |
946641 |
D-tagatose 16-bisphosphate aldolase 2 subunit |
b0528 |
57 |
74 |
58 |
64 |
3.72 |
RyhB |
42 |
61 |
54 |
60 |
3.3 |
-13.77 |
-20.79 |
-1.44788 |
ACUGGAAGGCUGGAGCGA&UUGCUCACAUUGCUUCCAGU |
((((((((..((((((((&)))))).))...)))))))) |
CGAUGACGGUUGCCACGCUGAUUGAAAACACGCUACAGGCGUGCGUUGAAUAUCAUGAUCCACAGGAUGAGUAACAUGGCGACAUUUUCUUUAGGUAAACAUCCGCACGUUGAGCUGUGCGACUUGCUGAAACUGGAAGGCUGGAGCGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0062158 |
0.9291058 |
ybcJ |
945158 |
ribosome-associated protein putative RNA-binding protein |
b1181 |
49 |
69 |
60 |
66 |
3.61 |
RyhB |
37 |
60 |
41 |
47 |
3.3 |
-16.27 |
-23.18 |
-1.71075 |
CUGGACGAAAUGAGCGAUGCG&CGACAUUGCUCACAUUGCUUCCAG |
((((((((..(((((((((((&)).)))))))))..)))..))))) |
ACUUUUUGCCGCCUGAAAGCGGCGGCAAAACUUGCAUCGCUGUGCCAGACUGGUUAUAAGGUGCGUUUUAACGUAAUGGCGGAACACCUGAUGAGCGAUGUACCUUUCUGGCAAAGUAAAACCCUGGACGAAAUGAGCGAUGCGGAAUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0014284 |
0.7090986 |
ycgN |
945804 |
UPF0153 family cysteine cluster protein |
b0556 |
-10 |
11 |
1 |
7 |
5.95 |
RyhB |
39 |
58 |
43 |
49 |
3.21 |
-12.89 |
-22.05 |
-1.35535 |
GGGGGCAACAGUGAGCAGAGU&ACAUUGCUCACAUUGCUUCC |
((((((((..(((((((..((&))..))))))).)))))))) |
CGCUGGCGGUAAGCAAUGGAAAGGCCUGAUGACUCGUCGUGAGAUUGAGCGUGAAGUCUGUUUGUGGGGGCAACAGUGAGCAGAGUAACCGCGAUUAUAUCCGCUCUGAUUAUCUGCAUCAUCGUCAGCCUGUCAUGGGCGGUCAAUCAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0101674 |
0.9496255 |
rzpD |
945929 |
DLP12 prophage putative murein endopeptidase |
b3110 |
57 |
75 |
57 |
63 |
2.99 |
RyhB |
44 |
62 |
56 |
62 |
3.3 |
-13.55 |
-19.84 |
-1.42475 |
UGCUGGAAUGAGUGAGAGC&GCUCACAUUGCUUCCAGUA |
((((((((..((((.((((&)))).))))..)))))))) |
AAACGUAGACCGCAUAUCGCCUUGAUGCGGCUCGGAAAAAAAUAAUAAGCCCUACAAAAUAUUGAGCGAGAAAUUAUGGAAAUUGCAUCGAAUAAAGGCGUCAUUGCAGACGCUUCGACCCCGGCGGGUCGUGCUGGAAUGAGUGAGAGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0070381 |
0.9291058 |
yhaO |
947628 |
putative transporter |
b2457 |
2 |
41 |
3 |
9 |
13.55 |
RyhB |
1 |
59 |
52 |
58 |
14.1 |
-11.11 |
-38.76 |
-1.16819 |
UGGAAGCAUUAGGAAUGAUCGAAACCCGGGGCCUGGUUGC&GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCA |
((((((((..((.((((.(((...((((((((((((((((&))))))))).....))))).))..............))))))).)).....)))))))) |
GAACCGCGAAAGCAGUUUACAAACACUGGUUGAAUGAACGGUCCCGUUCUGGACCCUGAUAAAGAGGAAAGCACAAUGGAAGCAUUAGGAAUGAUCGAAACCCGGGGCCUGGUUGCACUGAUUGAGGCUUCUGACGCGAUGGUGAAAGCU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0264441 |
0.9496255 |
eutM |
946942 |
ethanolamine utilization protein putative carboxysome structural protein |
b1156 |
-15 |
4 |
-14 |
-8 |
7.28 |
RyhB |
1 |
21 |
14 |
20 |
7.15 |
-12.15 |
-26.58 |
-1.27754 |
CGUGAGGGCAGCCUGAUGC&GCGAUCAGGAAGACCCUCGCG |
((((((((...((((((((&)).))))))....)))))))) |
GGAUGGUUUAGGUGCCGCAGCCUCAGAAACGCGUCCGCGUAAUAUUGCAUUUAACUAUAUCGUGAGGGCAGCCUGAUGCAUAAAGCAAUAUUAAAUAGUGACCUUAUUGCAACAAAGGCAGGGGAUGUUACCGUUUAUAACUACGAUGGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0152261 |
0.9496255 |
tfaE |
945723 |
e14 prophage putative tail fiber assembly protein |
b2525 |
55 |
73 |
56 |
62 |
6.49 |
RyhB |
40 |
60 |
53 |
59 |
3.29 |
-11.22 |
-21 |
-1.17976 |
CUGGAAGCUAAUAGCGGUG&CAUUGCUCACAUUGCUUCCAG |
((((((((....(((((((&)))))))......)))))))) |
AGGAUUUCGCCGCUCGCCGCAUGGACCAGUCGGUUCGUCGUGCGCUGAAAGGCCAUUCCGUGGACGAGGUUUAAUAUGCCAAAGAUUGUUAUUUUGCCUCAUCAGGAUCUCUGCCCUGAUGGCGCUGUUCUGGAAGCUAAUAGCGGUGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.024966 |
0.9496255 |
fdx |
947160 |
[2Fe-2S] ferredoxin |
b0156 |
-11 |
13 |
3 |
9 |
5.27 |
RyhB |
37 |
59 |
41 |
47 |
3.29 |
-11.5 |
-20.06 |
-1.2092 |
UGGAGCAAAAUAUGAGUGAUGACG&CGACAUUGCUCACAUUGCUUCCA |
((((((((....(((((((((.((&)).)))))))))..)))).)))) |
UACCAGGGUAUUAGAUAAUGGCGAUUAUUAUUGGGUUAGAAUUUGCCCAAUUGCCGAUGUCGUUUGGAGCAAAAUAUGAGUGAUGACGUAGCACUGCCGCUGGAGUUUACCGACGCAGCAGCCAACAAAGUUAAAAGCCUGAUCGCUGAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0215456 |
0.9496255 |
erpA |
944857 |
iron-sulfur cluster insertion protein |
b1107 |
-41 |
18 |
-41 |
-35 |
17.57 |
RyhB |
37 |
81 |
75 |
81 |
14.89 |
-13.54 |
-46 |
-1.4237 |
CACCUGGCGGCAGCUAUUAAUAAAACAAUAAGGAGAGCAGUGUGGGUCCAGUAAUGUUG&CGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUG |
((((((((....((((.(((((.........(((.(((((((((.....((((((((((&))))))))))))))))))))))..)))))..))))..)))))))) |
CCGGCGAUCAACAAUUUAUCAGGCUGGCCGAUGACACCUGGCGGCAGCUAUUAAUAAAACAAUAAGGAGAGCAGUGUGGGUCCAGUAAUGUUGGAUGUCGAAGGUUACGAACUGGACGCGGAAGAGCGUGAAAUACUGGCGCAUCCGCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0070778 |
0.9291058 |
nagZ |
945671 |
beta N-acetyl-glucosaminidase |
b1654 |
-12 |
7 |
-12 |
-6 |
4.57 |
RyhB |
43 |
58 |
52 |
58 |
3.2 |
-11.69 |
-19.46 |
-1.22917 |
GGAAGCAAGACAAUGAGCA&UGCUCACAUUGCUUCC |
((((((((.....((((((&))))))..)))))))) |
UGUUAUUUUCCGAUGCCGCACUGACCCGCUACAAUGUCAGAUUACUGCCGUAAAGAAGUUUGAGGAAGCAAGACAAUGAGCACCACUAUCGAAAAAAUCCAACGCCAGAUUGCUGAAAACCCGAUCCUGCUGUACAUGAAAGGUUCACCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0194808 |
0.9496255 |
grxD |
946169 |
glutaredoxin-4 |
b3668 |
52 |
75 |
53 |
59 |
2.92 |
RyhB |
6 |
26 |
19 |
25 |
7.74 |
-11.13 |
-21.79 |
-1.17029 |
UUCUCUGCCGCAUGGUUUUGCCUG&CAGGAAGACCCUCGCGGAGAA |
((((((((.....((((((.((((&))))))))))...)))))))) |
UCGCGCCAAUCUGAUGGAAAAACUGGGCGUCAGUAACGACGUAGAGCUGGCGCGCCGCAUGUUUGAUGGCUGGUGAUGAAGACGUUGUUCUCCCGCUUAAUUACCGUUAUUGCCUGCUUUUUUAUCUUCUCUGCCGCAUGGUUUUGCCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0261694 |
0.9496255 |
uhpB |
948195 |
sensory histidine kinase in two-component regulatory sytem with UhpA |
b0624 |
35 |
48 |
35 |
41 |
3.25 |
RyhB |
53 |
66 |
60 |
66 |
2.88 |
-11.71 |
-17.84 |
-1.23128 |
GUGGUACGGGAAGC&GCUUCCAGUAUUAC |
(((((((.((((((&)))))).))))))) |
GUCGUAAAAUUCGCCAACGACGAUUAUUCGGCGUUACACUUAUCACUCAUACAAAUCAAAUAGCAGGAUUUUGCAGUGUUACAACUUCUUUUAGCAGUUUUUAUUGGCGGUGGUACGGGAAGCGUGGCGAGAUGGCUGUUAAGUAUGCGA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0192746 |
0.9496255 |
flc |
945798 |
fluoride efflux channel dual topology membrane protein |
b1784 |
-16 |
-2 |
-8 |
-2 |
3.44 |
RyhB |
52 |
66 |
52 |
58 |
2.89 |
-12.31 |
-18.64 |
-1.29437 |
GUAGUACGGGGGGCA&UGCUUCCAGUAUUAC |
(((((((.(((((((&))))))).))))))) |
CGACAGCGAACCGUGGGCCUGAGAAGCGGCAACACAGGCGUAGCAUACAGUUGGCAAAUGUAGUACGGGGGGCAUAUGACCUGGUUUAUUGACCGGCGUCUGAACGGCAAAAACAAAAGCAUGGUGAAUCGCCAGCGUUUUUUACGCCGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0139638 |
0.9496255 |
yeaH |
946296 |
UPF0229 family protein |
b1423 |
9 |
56 |
50 |
56 |
11.6 |
RyhB |
38 |
84 |
38 |
44 |
14.89 |
-13.15 |
-39.64 |
-1.38269 |
CAGCAUCACGGCGGAUGAGAUUCGGGAACAGUUUUCGCAGGCAAUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUG |
(((((((.((((((.((((.....((((((((........((((((((&))))))))....)))).)))).......)))).)).))))))))))) |
AGUUUGUAAAUUCUUCCCGCAAGAGUGAAUGCGGUUACCUACACUCCAGAUUACUGACCACUGGAGGCAGACACUAUGGCGAACAGCAUCACGGCGGAUGAGAUUCGGGAACAGUUUUCGCAGGCAAUGUCAGCCAUGUACCAGCAAGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0088035 |
0.9291058 |
ydcJ |
945991 |
putative metalloenzyme |
b3902 |
43 |
75 |
61 |
67 |
8.05 |
RyhB |
57 |
89 |
67 |
73 |
13.55 |
-11.97 |
-33.57 |
-1.25862 |
AAAGCCACCACCGACGCCUGGCUGAAAGGCUGG&CCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUU |
(((((((.((((..((.((((((((((..((((&))))..))..)))))))).)))))).))))))) |
CGGAUGCGGCGCGAGCGCCUUAUCCGGCCUACGGGUCGUGCAUCCGACAACACCGAAUUUACAGGAACACAGAACAUGCAAAACAUUACUCAGUCCUGGUUUGUCCAGGGAAUGAUCAAAGCCACCACCGACGCCUGGCUGAAAGGCUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0167745 |
0.9496255 |
rhaD |
948401 |
rhamnulose-1-phosphate aldolase |
b1588 |
-19 |
-1 |
-10 |
-4 |
5.91 |
RyhB |
40 |
56 |
43 |
49 |
3.21 |
-11.03 |
-20.15 |
-1.15978 |
AAGCAAUAAGUGAGUAAUG&CAUUGCUCACAUUGCUU |
(((((((..((((((((((&))))))))))))))))) |
AUCGAAAAAAUAUAACCCACGACAACCAUAAAUUCUGGCAUGACAUUUUGUUUGAAAAGCAAUAAGUGAGUAAUGAUGAAAAUCCAUACCACAGAGGCGCUCAUGAAGGCUGAAAUCAGCCGUAGAAGUCUGAUGAAAACCUCCGCACUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0275701 |
0.9496255 |
ynfF |
945268 |
S- and N-oxide reductase A subunit periplasmic |
b2789 |
55 |
75 |
55 |
61 |
3.43 |
RyhB |
37 |
62 |
56 |
62 |
3.3 |
-13.26 |
-19.99 |
-1.39426 |
UACUGGAUAGUGGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAGUA |
(((((((..((((((((((((&))))))))).)))......))))))) |
ACGUCACCUCUGAUUUCCUGGCGAUGUCGCAGUCCAGAGUGAGCGUGGCUAACGCGAAUUUUCAGGAGUGCAACAAUGAGUUCUUUAAGUCAGGCUGCGAGCAGUGUGGAAAAACGCACAAAUGCUCGUUACUGGAUAGUGGUGAUGUUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0082802 |
0.9291058 |
gudP |
947265 |
putative D-glucarate transporter |
b3365 |
-9 |
12 |
2 |
8 |
4.28 |
RyhB |
38 |
57 |
42 |
48 |
3.21 |
-10.98 |
-18.47 |
-1.15452 |
GAGGCAAAAAUGAGCAAAGUC&GACAUUGCUCACAUUGCUUC |
(((((((...(((((((..((&))..)))))))..))))))) |
AAUUUGAUUUACAUCAAUAAGCGGGGUUGCUGAAUCGUUAAGGUAGGCGGUAAUAGAAAAGAAAUCGAGGCAAAAAUGAGCAAAGUCAGACUCGCAAUUAUCGGUAACGGUAUGGUCGGCCAUCGCUUUAUCGAAGAUCUUCUUGAUAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0282964 |
0.9496255 |
nirB |
947868 |
nitrite reductase large subunit NAD(P)H-binding |
b2170 |
-33 |
-7 |
-33 |
-27 |
3.48 |
RyhB |
2 |
24 |
18 |
24 |
7.69 |
-17.18 |
-28.35 |
-1.80643 |
CUCCGCGUCUUCCUCUUCCAGUGAUCG&CGAUCAGGAAGACCCUCGCGGAG |
(((((((......((((((..((((((&))))))))))))....))))))) |
UUUGAUUUCGCUGUCUGUUUAUUUUCUGACAAGCAGCGUAAACUCCGCGUCUUCCUCUUCCAGUGAUCGACCAGCAUGCAUAACUCCCCCGCAGUCUCCAGCGCGAAAUCGUUUGACCUGACCUCGACGGCGUUUUUAAUCGUUGCCUUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0008131 |
0.5651045 |
setB |
946673 |
lactose/glucose efflux system |
b1227 |
47 |
67 |
54 |
60 |
12.39 |
RyhB |
2 |
22 |
9 |
15 |
7.55 |
-13.21 |
-33.15 |
-1.389 |
CCGGGGCGGUCUUCCUGAUUG&CGAUCAGGAAGACCCUCGCGG |
((((((.((((((((((((((&))))))))))))))))).))) |
CACUGCGCAUCAGCGUCGCUUUGCCGGUGCCGUCGCGCCGCAAUAUCUGAAUAUCACCACCGGAGGACAGCACUAAUGCAAUUCCUGAAUAUGUUCUUCUUUGAUAUCUACCCGUACAUAGCCGGGGCGGUCUUCCUGAUUGGUAGCUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0085143 |
0.9291058 |
narI |
945808 |
nitrate reductase 1 gamma (cytochrome b(NR)) subunit |
b3777 |
15 |
47 |
35 |
41 |
9.19 |
RyhB |
51 |
84 |
56 |
62 |
14.45 |
-11.41 |
-35.05 |
-1.19973 |
CAGCCCUAAGGUUGGUGAAAUACUGGAAUGCAA&UUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUG |
((((((...(((((((((((((((((((.((((&))))))))))))))..))).)))))).)).)))) |
CAUUAGACUUAGAAAAUAUCGGGUCGUAACGUUGUGUUAUUACUUUUUCAGAGUUUACUAAGGAGAGGUUUACUCGUGGCGAUUAAUUUCAGCCCUAAGGUUGGUGAAAUACUGGAAUGCAACUUUGGUAACUAUCCUGUUAGCCAAAAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0225939 |
0.9496255 |
yifN |
2847676 |
PemK toxin family pseudogene |
b3032 |
-67 |
-43 |
-49 |
-43 |
8.96 |
RyhB |
40 |
63 |
40 |
46 |
3.3 |
-10.86 |
-23.12 |
-1.1419 |
AUACUGUUUAGCACAUGGAGCGAUG&CAUUGCUCACAUUGCUUCCAGUAU |
((((((...((((.(((((((((((&)))))))).)))))))..)))))) |
UGGUUGCGAUACUGUUUAGCACAUGGAGCGAUGGCGAUUCCGGUUUAUUAGCGUCGUGAAACCUAAGGACACCAUUUGGAAAGCCUGUUAACCCUUCCUCUGGCUGGUGAGGCCAGAGUCAGGAUUUUACAAAUUACCGACACUCACCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0301134 |
0.9496255 |
cpdA |
947515 |
3'5' cAMP phosphodiesterase |
b1269 |
-46 |
8 |
2 |
8 |
15.9 |
RyhB |
42 |
90 |
42 |
48 |
14.91 |
-11.89 |
-42.7 |
-1.2502 |
AAAAGCAUAUCAGACGCCUGGGAAGGCGACACCAAAAGGAAGCUCUAUGAGCGA&UUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
((((((....(((.(((((((...(((..........((((((....(((((((&)))))))....))))))...........)))..)))))))))))))))) |
CAGAUGUAAGUUCUGACUCACUGUUGCACAAAAGCAUAUCAGACGCCUGGGAAGGCGACACCAAAAGGAAGCUCUAUGAGCGAAAAGCUACAGAAAGUGCUGGCGCGUGCCGGCCACGGUUCUCGCCGUGAAAUCGAAUCUAUUAUUGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0175092 |
0.9496255 |
rluB |
945840 |
23S rRNA pseudouridine(2605) synthase |
b3248 |
19 |
35 |
29 |
35 |
5.01 |
RyhB |
18 |
35 |
18 |
24 |
9.68 |
-12.53 |
-27.22 |
-1.3175 |
GCUUCCGGUUCUCCGCG&CGCGGAGAACCUGAAAGC |
(((((.(((((((((((&))))))))))).)).))) |
UGGGGUGCUCUGGCCGUGGAUUUUCUUGCUGAUGCGCAAAGUCCGUCAGCAGUUUGCAGUGCAAUAAAGGUUUCUAUGACUUCUCUGUAUUUAGCUUCCGGUUCUCCGCGUCGUCAGGAGUUACUUGCGCAACUUGGCGUGACCUUUGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0123886 |
0.9496255 |
yhdE |
947753 |
dTTP/UTP pyrophosphatase m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase |
b2253 |
-13 |
5 |
-2 |
5 |
4.92 |
RyhB |
38 |
58 |
38 |
44 |
3.21 |
-12.03 |
-20.16 |
-1.26493 |
GGAAGGAAAAGCAAUGUC&GACAUUGCUCACAUUGCUUCC |
(((((.((.(((((((((&)))))))))....)).))))) |
CAAAUGGCAAAAUAUACACAACACUCUUUAUAGCAAAUAUAAGUGGACAGGUAUUCAAUGGCGGAAGGAAAAGCAAUGUCAGAAUUUUUGCCUUUUUCGCGACCAGCAAUGGGCGUGGAGGAACUCGCUGCAGUUAAAGAGGUUCUCGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0162426 |
0.9496255 |
arnB |
947375 |
uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase PLP-dependent |
b0728 |
-74 |
-59 |
-66 |
-60 |
1.61 |
RyhB |
50 |
64 |
51 |
57 |
2.98 |
-10.97 |
-15.56 |
-1.15347 |
AAUGCCCGGAAGCGAU&AUUGCUUCCAGUAUU |
(((((..(((((((((&))))))))).))))) |
CAAUGCCCGGAAGCGAUACGAAAUAUUCGGUCUACGGUUUAAAAGAUAACGAUUACUGAAGGAUGGACAGAACACAUGAACUUACAUGAAUAUCAGGCAAAACAACUUUUUGCCCGCUAUGGCUUACCAGCACCGGUGGGUUAUGCCUGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0284439 |
0.9496255 |
sucC |
945312 |
succinyl-CoA synthetase beta subunit |
b3867 |
-13 |
5 |
-6 |
1 |
8.94 |
RyhB |
38 |
58 |
43 |
49 |
3.21 |
-10.87 |
-23.02 |
-1.14295 |
GGAAGGAGUGAGCAUGUC&GACAUUGCUCACAUUGCUUCC |
(((((..(((((((((((&)))).)))))))....))))) |
CAACCGGCUGAUGACCCGAAACGGGCAUCCGCCGGUACGCCGUAGCCGCCAGAGACGCCAUCGGAAGGAGUGAGCAUGUCUGUACAGCAAAUCGACUGGGAUCUGGCCCUGAUCCAGAAAUAUAACUAUUCCGGGCCACGAUACACCUCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0299579 |
0.9496255 |
hemN |
948362 |
coproporphyrinogen III oxidase SAM and NAD(P)H dependent oxygen-independent |
b4308 |
25 |
59 |
46 |
52 |
9.14 |
RyhB |
53 |
90 |
60 |
66 |
14.49 |
-11.59 |
-35.22 |
-1.21866 |
AAAAGUGCAGCAUCUGGCAGCGUAAUGCAGGUAGC&GCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
(((((..(((((((((((.(((((((((.((..((&))..)).)))))))...))..))))))))))).))))) |
GAACUCCCAGCAAGACCCUGUAAAUAAUUCUGUGUAACUGCCCACGAUUAAAGGUGGCCGCUCAGGCGGUCACCGUAUUCGAUAAUAAAUGGGUCUGGAAAAAGUGCAGCAUCUGGCAGCGUAAUGCAGGUAGCCCAGUUCAACUCUCAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0205432 |
0.9496255 |
yjhR |
944740 |
pseudogene helicase family putative frameshift suppressor |
b4470 |
-72 |
-27 |
-34 |
-28 |
5.49 |
RyhB |
4 |
61 |
5 |
11 |
14.12 |
-12.39 |
-32 |
-1.30278 |
ACUGGUUUGUUGCUGUGUGUUUCUCCGUUCCUGGCAUUUUCUUGAU&AUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGU |
(((((..(((.((((((((((((((((.....((..((((((((((&)))))))))).))...)))))).......))))).)))..))..)))......))))) |
GUCACUGGUUUGUUGCUGUGUGUUUCUCCGUUCCUGGCAUUUUCUUGAUUUACCUGAAAUUUUAAGGUUUUUAAUAUGUUUGAUUCGACUUUAAAUCCGUUAUGGCAGCGUUACAUCCUCGCCGUUCAGGAGGAAGUAAAACCGGCGCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0133704 |
0.9496255 |
yhaM |
2847723 |
putative L-serine dehydratase alpha chain |
b0005 |
-18 |
50 |
44 |
50 |
14.7 |
RyhB |
1 |
65 |
1 |
7 |
14.12 |
-11.73 |
-40.55 |
-1.23338 |
UGAUAAAAGGAGUAACCUGUGAAAAAGAUGCAAUCUAUCGUACUCGCACUUUCCCUGGUUCUGGUCGC&GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUA |
(((((...(((((((..(((((.......(((((...((((.((..((.(((((..((((((((((((&))))))))))....))....)))))...))..)).)))).)))))))))))))))))...))))) |
GAAUAACAACCGCCGUUCUCAUCGAGUAAUCUCCGGAUAUCGACCCAUAACGGGCAAUGAUAAAAGGAGUAACCUGUGAAAAAGAUGCAAUCUAUCGUACUCGCACUUUCCCUGGUUCUGGUCGCUCCCAUGGCAGCACAGGCUGCGGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0190705 |
0.9496255 |
yaaX |
944747 |
DUF2502 family putative periplasmic protein |
b1013 |
-75 |
-34 |
-47 |
-41 |
10.22 |
RyhB |
7 |
44 |
14 |
20 |
13 |
-12.26 |
-35.48 |
-1.28911 |
CGAUGAGAGUGCAGAAGGUCGAGGCCGGGCGGGGGUUUUGCU&AGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUG |
(((((...((((...((((.....((..(((((((((((.((&)).)))))))))))))...))))....))))..))))) |
CGAUGAGAGUGCAGAAGGUCGAGGCCGGGCGGGGGUUUUGCUAUCCUGUUGCCAAUCUACAAGAGGGGAGAGCGCAUGACGCAAGGCGCAGUGAAAACAACGGGUAAACGUUCGCGCGCAGUAAGCGCGAAGAAAAAAGCGAUUCUUAGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0143473 |
0.9496255 |
rutR |
945075 |
rut operon transcriptional repressor for |
b4516 |
-39 |
-2 |
-9 |
-3 |
8.43 |
RyhB |
21 |
62 |
22 |
28 |
7.99 |
-11.31 |
-27.73 |
-1.18922 |
UACUGAUUUAGUGUAUGAUGGUGUUUUUGAGGUUCUCC&GGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUA |
(((((....((((((((...(((((((..(((((((((&))))))))).)))))))..))).....))))).....))))) |
UUCAUCGCAUGGACAAUACGGGUGAUGCUGCCAACUUACUGAUUUAGUGUAUGAUGGUGUUUUUGAGGUUCUCCAGUGGCUUCUGUUUCUAUCAGCUGUCCCUCCUGUUCAGCUACUGACGGGGUGGUGCGUAACGGCAAAAGCACUGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0238147 |
0.9496255 |
insA |
1450250 |
IS1 repressor TnpA |
b3080 |
-59 |
-34 |
-44 |
-38 |
3.58 |
RyhB |
1 |
25 |
6 |
12 |
7.71 |
-14.07 |
-25.36 |
-1.47943 |
UCCCAGCGACCAAAUCUUCCUGAUGC&GCGAUCAGGAAGACCCUCGCGGAGA |
((((.((((.....((((((((((((&)).))))))))))...)))))).)) |
AAAAUGCCUCUCACGAUCCCAGCGACCAAAUCUUCCUGAUGCAAUAUUUCUACUGGUAAUAAGGACUGUAAUUUCAUGAAAAUAAAAACUAUUUUAACGCCAGUAACCUGCGCUCUGCUGAUAAGUUUUUCCGCCCAUGCCGCUAACGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0052402 |
0.9291058 |
ygjK |
947596 |
alpha-glucosidase |
b1991 |
-43 |
-22 |
-35 |
-29 |
7.02 |
RyhB |
1 |
20 |
8 |
14 |
6.18 |
-11.2 |
-24.4 |
-1.17765 |
GUGAACUGGUCUUCCUGCUGGC&GCGAUCAGGAAGACCCUCGC |
((((...((((((((((...((&))...)))))))))).)))) |
GGGCGAUACGCUGGGAGCAGCCAUAGAGCUUGGUGAACUGGUCUUCCUGCUGGCACUGCUAUAAAGAGACGUGAGAUGCAAAUACUUGCCGAUUUACUGAAUACGAUCCCAGCCAUCGAUUCUACCGCUAUGUCGCGUGCACAACGGCAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0252289 |
0.9496255 |
cobT |
946517 |
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
b0892 |
-18 |
15 |
1 |
7 |
10.86 |
RyhB |
37 |
66 |
43 |
49 |
3.3 |
-11.3 |
-25.46 |
-1.18817 |
GUAAGUAGAGGCACCUGAGUGAGCAAUCUGUCG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC |
((((...((((((.....(((((((((..((((&)))))))))))))..)))))).....)))) |
UGGAUGCAGCGAAAUUUACCUUCACCCCGCCGCAAGGCGUCACGGUAGAUGAUCAACGUAAGUAGAGGCACCUGAGUGAGCAAUCUGUCGCUCGAUUUUUCGGAUAAUACUUUUCAACCUCUGGCCGCGCGUAUGCGGCCAGAAAAUUUA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0239401 |
0.9496255 |
rarA |
945505 |
recombination intermediate processing DNA-dependent ATPase |
b4547 |
-4 |
42 |
8 |
14 |
11.38 |
RyhB |
38 |
88 |
70 |
76 |
14.91 |
-12.44 |
-38.73 |
-1.30804 |
AAGCAUGGACUGGCUGGCUAAAUAUUGGUGGAUUCUGGUGAUUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUU |
((((.....(((((((((((((((((((.......((((((.((((&)))))))).))........))))))))...)))))))))))......)))) |
CUACUUGCCCGUAUGUAUCAACGUAUCAUGGAACAGCUCGUCGCCUGAUGAGUGGUUCUGCAAGAGGAAAUAAGCAUGGACUGGCUGGCUAAAUAUUGGUGGAUUCUGGUGAUUGUCUUUUUGGUAGGCGUCCUGCUGAACGUGAUUAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0130116 |
0.9496255 |
ypfN |
1450286 |
putative membrane protein UPF0370 family |
b0943 |
-22 |
6 |
-5 |
2 |
6.9 |
RyhB |
37 |
60 |
41 |
47 |
3.3 |
-12.08 |
-22.28 |
-1.27018 |
CUGGUUUACCAGUGAAGGAGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAG |
((((.....(((((...(((((((((((&))))))))))).)))))...)))) |
CCACAAAGGCGGGAGCAACGGGCGGUAAUGCGACGGCGGUUCUCUAUUUUGAUCUGGUUUACCAGUGAAGGAGUGAUGUUGAAACGGAUAAUCUGGAUUCUGUUCUUAUUGGGAUUAACGUGGGGCUGUGAGCUAUUUGCCCAUGAUGGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0158115 |
0.9496255 |
ycbV |
945562 |
putative fimbrial-like adhesin protein |
b3543 |
-67 |
-48 |
-57 |
-51 |
2.65 |
RyhB |
41 |
58 |
44 |
50 |
3.21 |
-12.11 |
-17.97 |
-1.27334 |
GGAAUUGAUUUGUGAGCAAU&AUUGCUCACAUUGCUUCC |
((((......((((((((((&))))))))))....)))) |
UAAGGGCGGGAAUUGAUUUGUGAGCAAUACAGACACGCAGUUCCAGGCUGCGGGUCACUAUAGAGAAUCCGGGUUAUGUUGCAGUUUAUUCUCCGACGUUUGGGACUCGUCAUCCCCACGUUUAUCGGUAUUACCCUUCUCACAUUUGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0155581 |
0.9496255 |
dppB |
948063 |
dipeptide/heme ABC transporter permease |
b2120 |
43 |
58 |
48 |
54 |
10.52 |
RyhB |
71 |
86 |
75 |
81 |
11.6 |
-12.11 |
-34.23 |
-1.27334 |
GCCUGCGCCCGGCUGG&CCAGCCGGGUGCUGGC |
(((.((((((((((((&)))))))))))).))) |
GUGUCGCCACACAUAAAGAAGCUCACUGGCAGGCUUAUUAUCAAGCCCGCCACCGCCUGCCGUGAGGAAAGAUGCAUGAGCGAGCCGUUAAUUGUCGGCAUCCGGCAUCAUAGUCCGGCCUGCGCCCGGCUGGUGAAAUCGUUAAUCGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0155581 |
0.9496255 |
yehM |
946651 |
uncharacterized protein |
b0968 |
-11 |
6 |
-2 |
5 |
3.42 |
RyhB |
37 |
58 |
38 |
44 |
3.22 |
-13.79 |
-20.43 |
-1.44998 |
GGAGAGCAGCAAUGUCG&CGACAUUGCUCACAUUGCUUCC |
(((.(((((((((((((&)))))))))......))))))) |
GCAAAGAAAUGGGCGUCAUUGUCCGGAGUUUUCCAUGGAUUUGCAACGCGUCCAUUAAGGAUAAGGAGAGCAGCAAUGUCGAAAGUCUGCAUAAUUGCCUGGGUUUACGGGCGAGUUCAGGGCGUAGGAUUUCGCUACACCACACAGUAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0061458 |
0.9291058 |
yccX |
945304 |
weak acylphosphatase |
b3573 |
47 |
75 |
68 |
74 |
7.83 |
RyhB |
37 |
66 |
38 |
44 |
3.3 |
-11.77 |
-22.9 |
-1.23759 |
GUACCUGUGAAGUGGCUUGCGCAGUGUCG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC |
(((.(((.((((.....((.(((((((((&))))))))).)).....)))))))...))) |
ACAUUUCCUUCGUUGGAUCAAAGCAGUAGGGACGCGCUCUCUGGCACUCUGCUGUUUUAGUGCAAAGGAGUGAUCAUGAACCGGUUUAUUAUUGCGGAUGCGACGAAAUGUAUCGGUUGCCGUACCUGUGAAGUGGCUUGCGCAGUGUCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0186683 |
0.9496255 |
ysaA |
948085 |
putative hydrogenase 4Fe-4S ferredoxin-type component |
b4551 |
57 |
73 |
67 |
73 |
3.25 |
RyhB |
39 |
58 |
39 |
45 |
3.21 |
-10.85 |
-17.31 |
-1.14085 |
GGAUUCAAUGGCGAUGU&ACAUUGCUCACAUUGCUUCC |
(((..((((((((((((&)))))))...)))))..))) |
GAGAUUUUCCAGCGUGAAAUGCAACAAGAACGACGCCAGCUGGACGGCUGGGAUGAAUUUGAGUAGAGGGUAAAGAUGGCAAUCCGAAAACGUUUUAUUGCGGGCGCAAAAUGCCCGGCCUGUCAGGCGCAGGAUUCAAUGGCGAUGUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0302697 |
0.9496255 |
yheV |
1450290 |
DUF2387 family putative metal-binding protein |
b3311 |
-68 |
-41 |
-49 |
-43 |
11.36 |
RyhB |
37 |
60 |
39 |
45 |
3.3 |
-11.34 |
-26 |
-1.19237 |
CUGUUGAAGCAAGUGCGUCGCGAUGUCG&CGACAUUGCUCACAUUGCUUCCAG |
(((..((((((((((....(((((((((&))))))))).))).)))))))))) |
GUCUCACCUGUUGAAGCAAGUGCGUCGCGAUGUCGCACGCGUUAAGACUUUACUGAACGAGAAGGCGGGUGCGUAAUGACCGAUAAAAUCCGUACUCUGCAAGGUCGCGUUGUUAGCGACAAAAUGGAGAAAUCCAUUGUUGUUGCUAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0234421 |
0.9496255 |
rpsQ |
947808 |
30S ribosomal subunit protein S17 |
b3391 |
-11 |
13 |
5 |
11 |
0.42 |
RyhB |
46 |
68 |
49 |
55 |
3.24 |
-11.42 |
-15.08 |
-1.20079 |
AGGAGAUACAAAUGAAGCAAUGGA&UCACAUUGCUUCCAGUAUUACUU |
(((..((((....(((((((((((&)).)))))))))..))))..))) |
CAGACGUACUAACGCUGGGUACCGGGACAAACUGCGAACCGCCACAAUGGUUGUGGCAACGGCAAGGAGAUACAAAUGAAGCAAUGGAUAGCCGCACUACUGUUGAUGCUGAUACCCGGCGUACAGGCGGCAAAGCCGCAAAAAGUGACG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0224751 |
0.9496255 |
hofQ |
947901 |
DNA catabolic putative fimbrial transporter |
b3835 |
-35 |
-4 |
-23 |
-17 |
9.16 |
RyhB |
53 |
86 |
71 |
77 |
14.49 |
-11.36 |
-35.01 |
-1.19448 |
GCCCUGACCAAACGGCUGGAAAAACUGGAGGC&GCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGC |
(((...(((...(((((((..(((((((((((&))))))))).....))..))))))))))...))) |
GUUUGCGGAAGAGACGGCUGCCGUCGAGCGUGCUGUUGAUGCCCUGACCAAACGGCUGGAAAAACUGGAGGCUAAAUGACGCCAGGUGAAGUACGGCGCCUAUAUUUCAUCAUUCGCACUUUUUUAAGCUACGGACUUGAUGAACUGAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0231967 |
0.9496255 |
ubiB |
948322 |
regulator of octaprenylphenol hydroxylation ubiquinone synthesis regulator of 2'-N-acetyltransferase putative ABC1 family protein kinase |
b4633 |
-42 |
-17 |
-32 |
-26 |
9.35 |
RyhB |
37 |
66 |
49 |
55 |
3.3 |
-12.21 |
-24.86 |
-1.28385 |
GUAUUUGGGGAGCAAUGGCGAUGACG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC |
(((....((((((((((((((((.((&)).))))))...)))))))))).....))) |
AAAAUGGACGAGGCACUGGCUGAAAUUGGUUUUGUAUUUGGGGAGCAAUGGCGAUGACGCAUCCUCACGAUAAUAUCCGGGUACCUCACAACACGGCAAGCCUGCAUUGCGGCGCUUCAGUCUCCGCUGCAUACUGUCCAGGUGAGCGCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0147406 |
0.9496255 |
xisD |
5625559 |
pseudogene exisionase in defective prophage DLP12Phage or Prophage Related |
b1279 |
-12 |
4 |
-9 |
-3 |
7.4 |
RyhB |
46 |
61 |
52 |
58 |
3.24 |
-10.81 |
-21.45 |
-1.13665 |
ACGGGAAGUAAUGUGA&UCACAUUGCUUCCAGU |
((.(((((((((((((&))))))))))))).)) |
AAAAUGGUACUUUAAAGGGCUAUUGCGGUAAGUUGACCAUAAUUUAUUCGCUCUAACCACAUAACGGGAAGUAAUGUGAAAUAUUUACUCAUUUUCUUACUGGUGUUAGCGAUCUUCGUGAUUUCGGUCACGUUGGGUGCGCAGAACGAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0309022 |
0.9496255 |
yciS |
944936 |
DUF1049 family inner membrane protein function unknown |
b1189 |
10 |
30 |
13 |
19 |
8.06 |
RyhB |
47 |
66 |
57 |
63 |
3.09 |
-11.54 |
-22.69 |
-1.2134 |
GUCAUACUGGGAAGUGGUGUG&CACAUUGCUUCCAGUAUUAC |
((.(((((((.((((((((((&))))))))))))))))).)) |
AAUAUUUUCAACUGAGUUAUCAAGAUGUGAUUAGAUUAUUAUUCUUUUACUGUAUCUACCGUUAUCGGAGUGGCUAUGCGAGUUGUCAUACUGGGAAGUGGUGUGGUAGGCGUUGCCAGCGCCUGGUACUUAAAUCAGGCAGGACAUGAG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0210945 |
0.9496255 |
dadA |
945752 |
D-amino acid dehydrogenase |