b1737 |
-67 |
-49 |
-66 |
-60 |
0.99 |
ChiX |
38 |
56 |
49 |
55 |
1.17 |
-19.2 |
-21.36 |
-2.03359 |
CGUCAAAGAGUUAUUUCAU&AUGAAAUUCCUCUUUGACG |
((((((((((..(((((((&)))))))..)))))))))) |
AAUUUUCCCGUCAAAGAGUUAUUUCAUAAAUCAAUACCGCAAUAUUUAAAUUGCGGUUUUUAAGGGUAUUUUUCUAUGAGUAAUGUUAUUGCAUCGCUUGAAAAGGUACUCCUCCCUUUUGCAGUUAAAAUAGGAAAGCAGCCACACGUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0002604 |
0.7067256 |
chbC |
945982 |
NN'-diacetylchitobiose-specific PTS enzyme IIC component |
b0619 |
-37 |
-26 |
-35 |
-29 |
1.64 |
ChiX |
46 |
57 |
49 |
55 |
2.73 |
-16.12 |
-20.49 |
-1.70736 |
CCGUCAAAGAGG&CCUCUUUGACGG |
((((((((((((&)))))))))))) |
UAAUAUCUAUGUAUUUUGAUUCAACAUUUUAAUUACAUCCGUCAAAGAGGCUCGGGACAACCCGCAAGGAAAACAAUGUUGCAGCUUAACGAGAAUAAACAGUUUGCAUUUUUCCAAAGACUGGCAUUUCCGCUGCGUAUCUUUUUGCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0010084 |
0.8602904 |
dpiB |
945233 |
sensor histidine kinase DpiB |
b0681 |
-19 |
-8 |
-14 |
-8 |
2.71 |
ChiX |
45 |
56 |
45 |
51 |
0.93 |
-15.8 |
-19.44 |
-1.67347 |
CGUCAAAGAGGA&UCCUCUUUGACG |
((((((((((((&)))))))))))) |
CGCUACUUUUUUAAUUUUUAUUUUUUCGCUGUUCACCUUUGGUGCAGCAAUUUAUACGUCAAAGAGGAUUAACCCAUGCGUACGUUUAGUGGCAAACGUAGUACGCUGGCGCUGGCUAUCGCCGGUGUUACAGCAAUGUCGGGCUUUAUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0011645 |
0.8602904 |
chiP |
945296 |
chitobiose outer membrane channel |
b3133 |
-16 |
-7 |
-14 |
-8 |
0.77 |
ChiX |
44 |
53 |
45 |
51 |
0.92 |
-12.48 |
-14.17 |
-1.32183 |
CAAAGAGGAA&UUCCUCUUUG |
((((((((((&)))))))))) |
ACCAUAUUCAGGACAUCCUGGCGCAGUACCACACAGCCUGUGAAGGCCAAUAAGCAAAACAAAGAGGAACACGCUAUGCCAAAUAUUGUUUUAAGCCGGAUUGAUGAACGCUUGAUUCACGGUCAGGUCGGCGUUCAAUGGGUCGGAUUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0053828 |
0.8602904 |
agaV |
947648 |
N-acetyl-D-galactosamine specific PTS enzyme IIB component |
b4199 |
-17 |
-6 |
-15 |
-9 |
4.99 |
ChiX |
46 |
57 |
49 |
55 |
2.73 |
-12.36 |
-20.08 |
-1.30912 |
CCGUCGAGGAGG&CCUCUUUGACGG |
((((((((((((&)))))))))))) |
UUAUCAUUGAUUAAAAUUAAAUCAGAAGAUCAUCACAGAGGAGAGCACACAAAGUCAGCCGUCGAGGAGGUAUCUAUGUUCAGUCGUGUUUUAGCCCUUCUGGCUGUGCUUUUGCUAAGUGCAAAUACAUGGGCAGCCAUUGAAAUUAAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0056965 |
0.8602904 |
yjfY |
948713 |
DUF1471 domain-containing protein YjfY |
b2688 |
54 |
64 |
58 |
64 |
0.95 |
ChiX |
45 |
55 |
45 |
51 |
0.93 |
-12 |
-13.88 |
-1.27099 |
GUUAAAGGGGA&UCCUCUUUGAC |
(((((((((((&))))))))))) |
UAAUUGUAGGCCUGCACAUAUGGUCACCAUUACAGUUAUGCUAAUUAAAACGAUUUUGACAGGCGGGAGGUCAAUUUGAUCCCGGACGUAUCACAGGCGCUGGCCUGGCUGGAAAAACAUCCUCAGGCGUUAAAGGGGAUACAGCGUGGG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0067551 |
0.8602904 |
gshA |
944881 |
glutamate--cysteine ligase |
b0549 |
-12 |
-2 |
-10 |
-4 |
1.65 |
ChiX |
43 |
53 |
45 |
51 |
0.93 |
-11.99 |
-14.57 |
-1.26993 |
CAAGGAGGAGU&AUUCCUCUUUG |
(((((((((((&))))))))))) |
AAAUACCAACACUGCUCGGAUAUACCGCCAGCUUGGUUGAUAAAAAAUGGUUGCGACUGGCAGCAAGGAGGAGUCAUGGCUGAUUUGAGAAAAGCAGCGCGUGGUCGGGAAUGCCAGGUAAGAAUCCCUGGCGUAUGUAAUGGCAACCCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0067873 |
0.8602904 |
ybcO |
945147 |
DLP12 prophage putative nuclease YbcO |
b1048 |
-42 |
-33 |
-41 |
-35 |
0.13 |
ChiX |
44 |
53 |
46 |
52 |
0.92 |
-11.91 |
-12.96 |
-1.26146 |
CAAAGGGGGA&UUCCUCUUUG |
((((((((((&)))))))))) |
UCCAUUAAAAUAGAUCGGAUCGAUAUAAGCACACAAAGGGGGAAGUGCUUACUAAUUAUGAAACAUAAACUACAAAUGAUGAAAAUGCGUUGGUUGAGUGCUGCAGUAAUGUUAACCCUGUAUACAUCUUCAAGCUGGGCUUUCAGUAUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0070501 |
0.8602904 |
opgG |
945005 |
osmoregulated periplasmic glucans (OPGs) biosynthesis protein G |
b4357 |
-13 |
-4 |
-11 |
-5 |
0.42 |
ChiX |
44 |
53 |
45 |
51 |
0.92 |
-11.89 |
-13.23 |
-1.25934 |
CAAGGAGGAA&UUCCUCUUUG |
((((((((((&)))))))))) |
GAAAAUCUUUUUUGUGAAAACACACGCAUAAAAAUGUUUUAAAUCGGGUUUUAAUGGACUCACAAGGAGGAAAAUAUGAGUCGUUCACAAAAUUUACGCCACAAUGUGAUUAACCAGGUCAUUGAUGAUAUGGCGCGGGGUCAUAUCCCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0071174 |
0.8602904 |
lgoR |
948881 |
putative DNA-binding transcriptional regulator LgoR |
b1363 |
-74 |
-59 |
-74 |
-68 |
0.44 |
ChiX |
36 |
51 |
45 |
51 |
1.07 |
-11.89 |
-13.4 |
-1.25934 |
AAGAGGAGUUAAAUUU&AAAUGAAAUUCCUCUU |
((((((((((..((((&))))..)))))))))) |
UAAGAGGAGUUAAAUUUUAUACAGUAUAAUCAUAAUAUUGCAGCAAGGUGGUUAUAAUUGAAAGAAUAUUUAGAUAUGAAUACAUCUCAUGUAAGAGUUGUUACUCAUAUGUGUGGGUUCCUGGUUUGGCUCUAUAGUCUUUCAAUGUUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0071174 |
0.8602904 |
trkG |
945932 |
Rac prophage K(+) transporter TrkG |
b1093 |
-13 |
2 |
-12 |
-6 |
1.42 |
ChiX |
38 |
52 |
45 |
51 |
1.06 |
-11.48 |
-13.96 |
-1.21591 |
AAAGAGGAAAAUCAU&AUGAAAUUCCUCUUU |
(((((((((..((((&))))..))))))))) |
GACACCCUGACCGCCUCGGCGCUGAACGAACCUUCAGCGAUGGCAGCGGCGCUCGAGCUUUAAAAGAGGAAAAUCAUGAAUUUUGAAGGAAAAAUCGCACUGGUAACCGGUGCAAGCCGCGGAAUUGGCCGCGCAAUUGCUGAAACGCUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0086532 |
0.8602904 |
fabG |
945645 |
3-oxoacyl-[acyl-carrier-protein] reductase FabG |
b1476 |
-49 |
-27 |
-41 |
-35 |
5.65 |
ChiX |
45 |
69 |
55 |
61 |
11.22 |
-11.4 |
-28.27 |
-1.20744 |
AUCGGUAUUGGCCCGAAUAAGGA&UCCUCUUUGACGGGCCAAUAGCGAU |
((((.((((((((((((..((((&))))..))..)))))))))).)))) |
CUUUUGCCGGGUUGAUUUUCCACUACAUCGGUAUUGGCCCGAAUAAGGAAGUGGACGAUGACGAGGAGGAUCAUCAUGAGUAAGUCGAAAAUGAUUGUGCGCACCAAAUUUAUUGAUCGCGCCUGUCACUGGACCGUGGUGAUUUGCUUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0089906 |
0.8602904 |
fdnI |
946038 |
formate dehydrogenase N subunit gamma |
b2835 |
36 |
46 |
40 |
46 |
3.27 |
ChiX |
45 |
55 |
45 |
51 |
0.93 |
-11.4 |
-15.6 |
-1.20744 |
GUCGAAGGGGA&UCCUCUUUGAC |
(((((((((((&))))))))))) |
AGAUGCCAUUACUUGGCAGCGGCAAACCUGACUUUGUCACGUUGAAAAGCUGGGUAGACGAAGCGGAACAACACGAUGAGUGAGUCAGUGCACACUAACACUUCGUUGUGGUCGAAGGGGAUGAAAGCGGUUAUCGUGGCGCAGUUUCUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0089906 |
0.8602904 |
lplT |
947317 |
lysophospholipid transporter |
b3657 |
20 |
30 |
22 |
28 |
1.81 |
ChiX |
47 |
57 |
49 |
55 |
2.73 |
-11.21 |
-15.75 |
-1.18732 |
CCGUUAAAGAG&CUCUUUGACGG |
(((((((((((&))))))))))) |
AUAUUCGCUCUCACAGGGAUGGUUUACAAAAUGCGUUAUCGGUCUCAGCACCCCUAUAGCAUCAAGGAAAAGCAGAUGAAGAGUGAAGUGUUGUCCGUUAAAGAGAAAAUUGGUUAUGGCAUGGGAGACGCCGCCAGCCACAUUAUUUUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0098469 |
0.8602904 |
yicJ |
948168 |
putative xyloside transporter YicJ |
b0336 |
-13 |
-1 |
-10 |
-4 |
4.32 |
ChiX |
40 |
52 |
43 |
49 |
0.93 |
-10.94 |
-16.19 |
-1.15872 |
AAGGGGGAAUUUC&GAAAUUCCUCUUU |
(((((((((((((&))))))))))))) |
CGAUUGCUUUUUAUCUUCAGAUGAAUAGAAUGCGGCGGAUUUUUUGGGUUUCAAACAGCAAAAAGGGGGAAUUUCGUGUCGCAAGAUAACAACUUUAGCCAGGGGCCAGUCCCGCAGUCGGCGCGGAAAGGGGUAUUGGCAUUGACGUUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0112102 |
0.8602904 |
codB |
944994 |
cytosine transporter |
b2019 |
-18 |
-7 |
-15 |
-9 |
3.01 |
ChiX |
43 |
54 |
45 |
51 |
0.94 |
-10.86 |
-14.81 |
-1.15025 |
UUAAAGAGGAAU&AUUCCUCUUUGA |
((((((((((((&)))))))))))) |
GGAAGAUCACCUUCCGGGGGCUUUUUUAUUGCGCGGUUGAUAACGGUUCAGACAGGUUUAAAGAGGAAUAACAAAAUGACAGACAACACUCGUUUACGCAUAGCUAUGCAGAAAUCCGGCCGUUUAAGUGAUGACUCACGCGAAUUGCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0116502 |
0.8602904 |
hisG |
946549 |
ATP phosphoribosyltransferase |
b4322 |
-17 |
2 |
-12 |
-6 |
4.61 |
ChiX |
38 |
55 |
44 |
50 |
1.17 |
-10.82 |
-16.6 |
-1.14601 |
GUGAAAGAGGAAAAAUCAU&AUGAAAUUCCUCUUUGAC |
((.(((((((((...((((&))))..))))))))).)) |
CAUCCGGAUACCUAAACAACUCCAGGGUUCCGCGUCUCUUUGCUGUGGAACCCACUAUGUGAAAGAGGAAAAAUCAUGGAACAGACCUGGCGCUGGUACGGCCCAAACGAUCCGGUUUCUUUAGCUGAUGUCCGUCAGGCGGGCGCAACU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0118768 |
0.8602904 |
uxuA |
947082 |
D-mannonate dehydratase |
b0847 |
24 |
53 |
46 |
52 |
5.92 |
ChiX |
26 |
55 |
27 |
33 |
1.18 |
-10.7 |
-17.8 |
-1.1333 |
GUUAAAUGGGAAUUACAUUCUGUUAUUAUU&AAUAAUAAAAAAAUGAAAUUCCUCUUUGAC |
((((((..((((((.((((...((((((((&))))))))...)))).))))))..)))))) |
GAAUUCUGGUAAAAAACAUUAUCGUAAAUUACCAUUUCUUUCAACAGCUUACUAGUAAACAAGAAGUUAGCCUCCGUGAAUAUAAACGUCGCCGAAUUGUUAAAUGGGAAUUACAUUCUGUUAUUAUUUGUGGUCCUCGCGCUUGGGCUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0125842 |
0.8602904 |
ybjL |
945474 |
putative transport protein YbjL |
b2448 |
-17 |
-5 |
-11 |
-5 |
2.87 |
ChiX |
45 |
57 |
45 |
51 |
2.73 |
-10.66 |
-16.26 |
-1.12906 |
CUGUGAAGGAGGA&UCCUCUUUGACGG |
((((.((((((((&)))))))).)))) |
AAUGAAACGGUGGGAAGUGGCUUUACUGGUGAUGGUAAUGUUGGUUUGCUGUAUUGAACUGUGAAGGAGGACGCCAUGAAACUUUUAAUCGCAAUCAUCCUGAUGGUGCUGACUGGUGUUUGCUUUGCAGAUGUUGGUGAUUACAGGCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0128294 |
0.8602904 |
yffQ |
946927 |
CPZ-55 prophage uncharacterized protein YffQ |
b3287 |
-68 |
-55 |
-63 |
-57 |
6.09 |
ChiX |
41 |
54 |
43 |
49 |
0.94 |
-10.56 |
-17.59 |
-1.11847 |
UCAGAGGGGGAUUU&AAAUUCCUCUUUGA |
((((((((((((((&)))))))))))))) |
CUGUCAAUCAGAGGGGGAUUUGUCUAGAAUAGAAGAAAUAAUCUUUCUAACUCCUGAACACAUCUCUGGAGAUUUAUGUCAGUUUUGCAAGUGUUACAUAUUCCGGACGAGCGGCUUCGCAAAGUUGCUAAACCGGUAGAAGAAGUGAAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0134642 |
0.8602904 |
def |
947780 |
peptide deformylase |
b4175 |
-16 |
-5 |
-11 |
-5 |
1.9 |
ChiX |
43 |
55 |
43 |
49 |
0.94 |
-10.44 |
-13.28 |
-1.10576 |
GUCAGGGGGAAU&AUUCCUCUUUGAC |
((((((((((((&))))))))).))) |
CAGUCAGGGCGAUAUUAUGGACCAACGCCGCGCCAACGCGCAGCGUAACGACUACCAGCGUCAGGGGGAAUAACGAUGCGUAAGUCAGUUAUCGCGAUUAUCAUCAUCGUGCUGGUAGUGCUUUACAUGUCUGUCUUUGUCGUCAAAGAA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0142687 |
0.8602904 |
hflC |
948697 |
regulator of FtsH protease |
b0846 |
-14 |
-6 |
-14 |
-8 |
0.54 |
ChiX |
44 |
52 |
46 |
52 |
0.86 |
-10.43 |
-11.83 |
-1.1047 |
AGAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
UCAAAAUAAGAAGAGGGAAGACAACAUUAGCAAGGUUGUGUACAUUUGUACACAAUUGCAGAGAGAGGAAAUGACAUGCGUCGCGCUAACGAUCCGCAACGGCGAGAAAAAAUUAUCCAGGCCACGCUGGAGGCGGUGAAACUUUACGGA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0143379 |
0.8602904 |
rcdA |
945473 |
DNA-binding transcriptional regulator RcdA |
b2851 |
-15 |
-4 |
-10 |
-4 |
2.08 |
ChiX |
43 |
54 |
43 |
49 |
0.94 |
-10.38 |
-13.4 |
-1.09941 |
UCACAGAGGAAU&AUUCCUCUUUGA |
(((.((((((((&)))))))).))) |
AAAGAUAAAUAUAAAAAUAUCAAUGAGUCAAUCAAUAAUAAUUUGGCAUCACGAGACACAUCACAGAGGAAUAUUAUGAGCACAGAAACAAUUGAAAUAUUCAAUAAUAGUGAUGAAUGGGCAAAUCAACUAAAACACGCAUUAUCGAAA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0146892 |
0.8602904 |
ygeG |
946986 |
TPR repeat-containing putative chaperone YgeG |
b1345 |
-62 |
-50 |
-57 |
-51 |
1.19 |
ChiX |
42 |
53 |
43 |
49 |
0.93 |
-10.35 |
-12.47 |
-1.09623 |
CAAACGAGGGAUU&AAUUCCUCUUUG |
((((.((((((((&)))))))))))) |
GUAAGCCAGACAGCAAACGAGGGAUUAUCUGGUACAACUAUCCAAAGAUAAAUCAGUUUAUCAAAGACUCAUGAUAUGUCUAAAUUACCAACAGGUGUCGAGAUUAGAGGUAGAUACAUUCGCAUCUGGUUCAUGUUUCGAGGAAAACGA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0149041 |
0.8602904 |
intR |
946976 |
Rac prophage putative integrase |
b1162 |
-14 |
-1 |
-10 |
-4 |
5.61 |
ChiX |
42 |
56 |
45 |
51 |
0.95 |
-10.31 |
-16.87 |
-1.09199 |
CGCAAGGAGGAAUU&AAUUCCUCUUUGACG |
((((((((((((((&)))))))))))).)) |
AUUUUAGCGUAUAUUGUACAAAGUAUUAUUGGGUCGUGUACAGGCGACGGAGAUUUGUGACCGCAAGGAGGAAUUGUGGCUUAUUACAGCAUUGGUGAUGUUGCUGAACGUUGCGGGAUUAAUCCUGUCACUCUCCGGGCCUGGCAACGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0151958 |
0.8602904 |
bluR |
945735 |
DNA-binding transcriptional repressor BluR |
b2513 |
-22 |
-11 |
-22 |
-16 |
1.15 |
ChiX |
45 |
55 |
49 |
55 |
0.93 |
-10.11 |
-12.19 |
-1.07081 |
GUUAAGGAAGGA&UCCUCUUUGAC |
(((((((.((((&))))))))))) |
GCAAACGGCAGUUGCGCAGGAUAGCGUAGCCGCGCAUUUGCGCACGUUACUGGGUUAAGGAAGGAGAAGGACAGCGUGGAAAUUUACGAGAACGAAAACGACCAGGUAGAAGCGGUUAAACGCUUUUUUGCUGAAAAUGGCAAAGCACUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0167442 |
0.8602904 |
yfgM |
946981 |
ancillary SecYEG translocon subunit |
b4255 |
-14 |
-6 |
-12 |
-6 |
0.69 |
ChiX |
43 |
51 |
43 |
49 |
0.85 |
-10.02 |
-11.56 |
-1.06128 |
AAGAGGAAU&AUUCCUCUU |
(((((((((&))))))))) |
UUGUCACAAAGGUGGAGGCAAUGUCAGUGGUGUGUGACAAUAAGAGUAUCGGCAGGACAUUAAGAGGAAUGAGCCAUGGCAAACCCGGAACAACUGGAAGAACAGCGUGAAGAAACACGUUUGAUUAUUGAAGAAUUACUGGAAGAUGGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0174928 |
0.8602904 |
rraB |
948773 |
ribonuclease E inhibitor protein B |
b2545 |
-15 |
-1 |
-9 |
-3 |
4.14 |
ChiX |
41 |
55 |
43 |
49 |
0.94 |
-10 |
-15.08 |
-1.05916 |
GUUAAUGAGGGAUUU&AAAUUCCUCUUUGAC |
(((((.(((((((((&))))))))).))))) |
GAAACGCUAAACCUUAACGCCCCUGGCGCGGGUGCGGCAGGGAUGAAAAUUAAUCGUAUUGUUAAUGAGGGAUUUAUGAAAACGAUGCUGGCAGCUUAUUUACCAGGAAAUUCGACCGUCGAUCUGCGGGAAGUUGCGGUGCCGACGCCG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0176637 |
0.8602904 |
yphC |
947019 |
putative zinc-binding dehydrogenase YphC |
b2461 |
65 |
73 |
65 |
71 |
0.05 |
ChiX |
42 |
50 |
44 |
50 |
0.85 |
-9.88 |
-10.78 |
-1.04645 |
AGGGGAAUU&AAUUCCUCU |
(((((((((&))))))))) |
CAAACCGUCAGCGGUUUAGGUCGCUUAUUAAAUUAUACGCUUUGUGAAAUGACCAAAAGUUAAUACGAGGCAUUCAUGAAACGAAUUGCGUUUGUGGGUAGCGUCGGGGCAGGAAAAACAACGUUAUUUAAUGCGUUGCAGGGGAAUUAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0187259 |
0.8602904 |
eutP |
946933 |
putative ethanolamine utilization acetate kinase EutP |
b0526 |
34 |
45 |
35 |
41 |
4.07 |
ChiX |
41 |
52 |
45 |
51 |
0.86 |
-9.83 |
-14.76 |
-1.04115 |
AAAGAGGAAUUU&AAAUUCCUCUUU |
((((((((((((&)))))))))))) |
GUAUGCUGAUUCGCGCGGGAAAUAUGGGUAUUAUACGCAACUCAAUUACCCACACAUGUCUAAACGGAAUCUUCGAUGCUAAAAAUCUUCAAUACUCUGACACGCCAAAAAGAGGAAUUUAAGCCUAUUCACGCCGGGGAAGUCGGCAUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0191875 |
0.8602904 |
cysS |
946969 |
cysteine--tRNA ligase |
b0129 |
-75 |
-66 |
-74 |
-68 |
0.62 |
ChiX |
41 |
50 |
43 |
49 |
0.85 |
-9.83 |
-11.3 |
-1.04115 |
AGAGGAGUUU&AAAUUCCUCU |
((((((((((&)))))))))) |
AGAGGAGUUUUGACGGCUAUCACCCUUUAUCAACAAUGGUCAGGGUAGACUGAUUUUCGGCUAAGGAGGAAGGCGAUGUUAGGUUGGGUAAUUACCUGUCACGAUGACCGGGCGCAAGAGAUACUGGAUGCGCUGGAGAAAAAACAUGGG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0191875 |
0.8602904 |
yadI |
947397 |
putative PTS enzyme IIA component YadI |
b1182 |
-50 |
-32 |
-43 |
-37 |
5.16 |
ChiX |
37 |
55 |
42 |
48 |
1.17 |
-9.77 |
-16.1 |
-1.0348 |
GUAAAACAGGAGUUUCAUU&AAUGAAAUUCCUCUUUGAC |
((.(((.((((((((((((&)))))))))))).))).)) |
GAUGAAGUAAAAUUUAUUAAUAGUUGUAAAACAGGAGUUUCAUUACAAUUUAUAUAUUUAAAGAGGCGAAUGAUUAUGACUGAAAUCGUUGCAGAUAAAACGGUAGAAGUAGUUAAAAACGCAAUCGAAACCGCAGAUGGAGCAUUAGAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0197568 |
0.8602904 |
hlyE |
945745 |
hemolysin E |
b2098 |
-19 |
-6 |
-12 |
-6 |
0.4 |
ChiX |
42 |
55 |
42 |
48 |
0.94 |
-9.74 |
-11.08 |
-1.03162 |
GUCAUGAAGGAAUU&AAUUCCUCUUUGAC |
((((...(((((((&)))))))...)))) |
AAGGUAUUUAAAAGGUAUUAUUAAGUGGUAUUGUCAUCGCGUACCUUACAUUACCUGUCAUGAAGGAAUUAAAAGAUGAAAACAACAGCAAAGCUGUCGUUCAUGAUGUUUGUUGAAUGGUUUAUCUGGGGCGCGUGGUUUGUGCCAUUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0200479 |
0.8602904 |
yegT |
946638 |
putative transporter YegT |
b2204 |
-49 |
-39 |
-48 |
-42 |
1.47 |
ChiX |
42 |
52 |
45 |
51 |
0.86 |
-9.73 |
-12.06 |
-1.03056 |
AAAGGGGAGUU&AAUUCCUCUUU |
(((((((((((&))))))))))) |
UCAAGGUGUUACCGCUGUCACUGGCGAAAGGGGAGUUAGGUCACCAUUACCGCUUCGGCUGGCUGGAGGGGAACAAUGGCAAAUCGUAAACGUGACGCCGGGCGCGAGGCGCUGGAGAAAAAAGGCUGGUGGCGCAGUCACCGUUGGCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0201459 |
0.8602904 |
napH |
945984 |
ferredoxin-type protein NapH |
b1003 |
-71 |
-56 |
-64 |
-58 |
3.2 |
ChiX |
43 |
56 |
45 |
51 |
0.95 |
-9.72 |
-13.87 |
-1.0295 |
CGUUAUCAAGGGGAAU&AUUCCUCUUUGACG |
(((((..(((((((((&)))))))))))))) |
UGCUCGUUAUCAAGGGGAAUAUGUCGCAGGUCUGGCAGUUAAACUUAACGGCUAAUCUUCAACAGGAGGAUACGCAUGCCAACUCAAGAAGCGAAAGCUCAUCACGUCGGUGAAUGGGCAUCUCUGCGCAAUACGUCGCCGGAAAUAGCC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0202444 |
0.8602904 |
yccJ |
948930 |
PF13993 family protein YccJ |
b3441 |
-16 |
-8 |
-14 |
-8 |
2.03 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-9.63 |
-12.57 |
-1.01997 |
CAAAGAGGA&UCCUCUUUG |
(((((((((&))))))))) |
CAAAAAAAUGCAUUUGACUCGCAUUUGAAAGUCAAUGAUGUUGAAAGGGACAUUUACCCCAAAGAGGACAAAGGAAUGAGUGAGAUAGUAAUACGCCACGCAGAAACACGGGAUUACGAGGCCAUCAGGCAGAUUCACGCCCAGCCGGAG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0211532 |
0.8602904 |
yhhY |
947943 |
N-acetyltransferase YhhY |
b3514 |
-12 |
2 |
-12 |
-6 |
3.02 |
ChiX |
38 |
51 |
45 |
51 |
1.06 |
-9.59 |
-13.67 |
-1.01573 |
AAGGGGACUUUCAU&AUGAAAUUCCUCUU |
(((((((.((((((&)))))).))))))) |
CGAGCAAUUUCCUCCAGCCAGGAAAACGCCAGCACCGAAUCGAAACAAUAACGUUGCAGGCUUAAGGGGACUUUCAUGGCUAACUAUUUUAUUGAUCGCCCGGUUUUUGCCUGGGUACUUGCCAUUAUUAUGAUGCUUGCAGGUGGUCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0215704 |
0.8602904 |
mdtF |
948030 |
multidrug efflux pump RND permease MdtF |
b0886 |
-18 |
-8 |
-14 |
-8 |
4.18 |
ChiX |
45 |
56 |
45 |
51 |
0.93 |
-9.48 |
-14.59 |
-1.00408 |
CGUCAGGAGGA&UCCUCUUUGACG |
(((((((((((&))))))).)))) |
GGACGUUACGCGGAAUUAAGUGUGGCUGGUGGCCCAUUCGCCACAUUACUGGCCCAUCGUCAGGAGGAGAUUUAAAUGCGCGCUUUGCUACCCUAUCUGGCACUGUAUAAACGUCAUAAAUGGAUGUUAAGUCUUGGUAUUGUGCUGGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0227615 |
0.8602904 |
cydC |
945504 |
glutathione/L-cysteine ABC exporter subunit CydC |
b0545 |
-13 |
2 |
-12 |
-6 |
3.73 |
ChiX |
38 |
53 |
46 |
52 |
1.15 |
-9.44 |
-14.32 |
-0.999846 |
CAAAGAGGUUUUUAU&AUGAAAUUCCUCUUUG |
((((((((.((((((&))))))..)))))))) |
ACAUUGCGCCUUUAUGCAUAAUGAGAUAAAGGAAUAUCAAAUAAAAUAACGAUAGGUCAUAACAAAGAGGUUUUUAUGAAAACACUUAUCGUUUCAACUGUAUUGGCAUUCAUAACAUUUUCUGCGCAGGCUGCAGCAUUUCAGGUCACU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0232111 |
0.8602904 |
ybcL |
945165 |
DLP12 prophage periplasmic protein YbcL |
b3176 |
-68 |
-60 |
-67 |
-61 |
1.53 |
ChiX |
48 |
56 |
49 |
55 |
0.89 |
-9.42 |
-11.84 |
-0.997728 |
CGUCAAAGA&UCUUUGACG |
(((((((((&))))))))) |
UUCAUGACGUCAAAGAAACCGUAGAAGCGAUGCGGGUGGUGGAAGCCACUCUGUCUGCAAAGGAAAACAAACGCUAUGAGUAAUCGUAAAUAUUUCGGUACCGAUGGGAUUCGUGGUCGUGUAGGGGAUGCGCCGAUCACACCUGAUUUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0234392 |
0.8602904 |
glmM |
947692 |
phosphoglucosamine mutase |
b3413 |
53 |
67 |
59 |
65 |
6.52 |
ChiX |
41 |
55 |
43 |
49 |
0.94 |
-9.41 |
-16.87 |
-0.996669 |
GUCAUUGGGGGAUUU&AAAUUCCUCUUUGAC |
((((..(((((((((&)))))))))..)))) |
UUCCCCUGACCUUUGGUCUGCCACCAGAUGUUAUUCAUCCGCUAUUGUUCUCUUUUGACUUACAAGGAUGAACAUAUGCUAACAGUACCGGGAUUAUGCUGGCUAUGCCGAAUGCCACUGGCGUUAGGUCAUUGGGGGAUUUGUUCGGUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0235542 |
0.8602904 |
yhgH |
947915 |
DNA utilization protein YhgH |
b1466 |
63 |
71 |
65 |
71 |
2.58 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-9.39 |
-12.88 |
-0.99455 |
CAAGGAGGA&UCCUCUUUG |
(((((((((&))))))))) |
AUUCAACCUGUUCAACAGUAGCCGUAUCGAUGCCAUCAACAUCACCGAAGUGCGCGACAAAGCGGAGGGCGAAUAAUGCAGAUCCUCAAAGUGAUCGGCCUGUUGAUGGAGUAUCCGGACGAGCUGUUGUGGGAAUGCAAGGAGGACGCG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0237858 |
0.8602904 |
narW |
946032 |
NarW putative private chaperone for NarZ nitrate reductase subunit |
b3909 |
-51 |
-40 |
-47 |
-41 |
2.65 |
ChiX |
42 |
53 |
43 |
49 |
0.93 |
-9.37 |
-12.95 |
-0.992432 |
CAUUGAGGAAUU&AAUUCCUCUUUG |
((..((((((((&))))))))..)) |
UCGUUUCCAUCAACACUGAUGCUCCAUUGAGGAAUUACGCAUCAGCCCUUAAAAAUAUGCCGACAGGUGAUGGAAAUGCAGAUAAAACGCUCGAUUGAGAAAAUCCCGGGGGGGAUGAUGCUCGUCCCGCUAUUCCUUGGCGCACUGUGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0240197 |
0.8602904 |
kdgT |
948407 |
2-dehydro-3-deoxy-D-gluconate:H(+) symporter |
b0440 |
-16 |
-8 |
-15 |
-9 |
0.56 |
ChiX |
44 |
52 |
45 |
51 |
0.86 |
-9.36 |
-10.78 |
-0.991373 |
AAAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
GGCCUGAUAUAACUGCUGCGCGUUCGUACCUUGAAGGAUUCAAGUGCGAUAUAAAUUAUAAAGAGGAAGAGAAGAGUGAAUAAAUCUCAAUUGAUCGACAAGAUUGCUGCAGGGGCUGAUAUCUCUAAAGCUGCGGCUGGCCGUGCGUUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0241376 |
0.8602904 |
hupB |
949095 |
DNA-binding protein HU-beta |
b4342 |
-41 |
-28 |
-41 |
-35 |
1.73 |
ChiX |
34 |
47 |
41 |
47 |
1.05 |
-9.34 |
-12.12 |
-0.989255 |
GGGGUUUUGUUUUU&AAAAAUGAAAUUCC |
((((((((((((((&)))))))))))))) |
UCUGAAAGGUUUUCUUUCAAAUUAGAAAUGUUGUGGGGUUUUGUUUUUGUAUCUUUUAUCUCUAAGGAGCUUGCUUUGGGUCAAUCAGAAUACAUUUCAUGGGUAAAAUGUACUUCCUGGCUAAGUAACUUUGUGAAUCUUAGAGGGUUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.024375 |
0.8602904 |
yjiT |
945056 |
putative uncharacterized protein YjiT |
b1474 |
-13 |
-5 |
-12 |
-6 |
1.53 |
ChiX |
44 |
52 |
45 |
51 |
0.86 |
-9.28 |
-11.67 |
-0.9829 |
AAAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
AUUUCGCGCAAAAAGAUUCAGAAUUUUACUGUUAGUUUCCUCGCGCAGUAAUACCCCUGAAAAAAGAGGAAAGCAAUGGACGUCAGUCGCAGACAAUUUUUUAAAAUCUGCGCGGGCGGUAUGGCUGGAACAACAGUAGCGGCAUUGGGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0251018 |
0.8602904 |
fdnG |
946035 |
formate dehydrogenase N subunit alpha |
b1304 |
-16 |
-1 |
-14 |
-8 |
0.69 |
ChiX |
37 |
54 |
45 |
51 |
1.17 |
-9.22 |
-11.08 |
-0.976545 |
UCAAGAGGACAACAUU&AAUGAAAUUCCUCUUUGA |
(((((((((...((((&))))....))))))).)) |
UAAAAAAUUGGCACGCAAAUUGUAUUAACAGUUCAGCAGGACAAUCCUGAACGCAGAAAUCAAGAGGACAACAUUAUGGGUAUUUUUUCUCGCUUUGCCGACAUCGUGAAUGCCAACAUCAACGCUCUGUUAGAGAAAGCGGAAGAUCCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0258506 |
0.8602904 |
pspA |
945887 |
phage shock protein A |
b1040 |
-16 |
-2 |
-11 |
-5 |
4.15 |
ChiX |
38 |
52 |
41 |
47 |
1.06 |
-9.19 |
-14.4 |
-0.973367 |
AAAGCGGGGUUUCAU&AUGAAAUUCCUCUUU |
((((.((((((((((&)))))))))).)))) |
UGUCAGUACUUCUGGUGCUUCUAUUUUAGAGGCAGCUGUCAGGUGUGCGAUCAAUAAAAAAAGCGGGGUUUCAUCAUGUUUAAUGAAGUCCAUAGUAUUCAUGGUCAUACAUUAUUGUUGAUCACUAAAUCUUCUUUGCAGGCGACAGCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0262335 |
0.8602904 |
csgD |
949119 |
DNA-binding transcriptional dual regulator CsgD |
b1444 |
42 |
51 |
44 |
50 |
2.88 |
ChiX |
44 |
53 |
45 |
51 |
0.92 |
-9.1 |
-12.9 |
-0.963835 |
CGAAGGGGAA&UUCCUCUUUG |
((((((((((&)))))))))) |
UUGCCGAUCCUGGGGGCCUGGUGGCUAACCCGCGAAGGCGACAAUGGUCAAUAACCACUGAUACAGGAAUAUGCUAUGCAACAUAAGUUACUGAUUAACGGAGAACUGGUUAGCGGCGAAGGGGAAAAACAGCCUGUCUAUAAUCCGGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0274172 |
0.8602904 |
patD |
945876 |
gamma-aminobutyraldehyde dehydrogenase |
b1114 |
10 |
40 |
31 |
37 |
17.05 |
ChiX |
46 |
73 |
49 |
55 |
11.33 |
-8.98 |
-37.36 |
-0.951125 |
CAAUAUCGUUAUACGCUGCCCGUCAAAGCGG&CCUCUUUGACGGGCCAAUAGCGAUAUUG |
((((((((((((.....(((((((((((.((&)).)))))))))))..)))))))))))) |
UAAUGAACAGCAUUGCUUAUCAGAGAUAUGCCCCCAUAUGUUGAGGCAUAUCCUAACGAGAAUCUGACAACCGUUAUGCCUGAACAAUAUCGUUAUACGCUGCCCGUCAAAGCGGGUGAGCAGCGUCUGCUGGGCGAGUUAACCGGCGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0290804 |
0.8602904 |
mfd |
945681 |
transcription-repair coupling factor |
b1418 |
-18 |
-7 |
-18 |
-12 |
2.59 |
ChiX |
45 |
55 |
49 |
55 |
0.93 |
-8.95 |
-12.47 |
-0.947947 |
GUUAAAGCAGGA&UCCUCUUUGAC |
(((((((.((((&))))))))))) |
GGUGAACAAUAUUUAAUGAAAUUUUGAGAAAAGCCCGUUAUGUUAACGGAAAAUUAUGUUAAAGCAGGAAAUGUUAUGGAAAAUAAAUAUUCAAGGUUACAAAUCAGCAUUCACUGGCUGGUCUUUUUACUGGUUAUCGCAGCGUAUUGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.029512 |
0.8602904 |
cybB |
947241 |
superoxide oxidase |
b1486 |
-74 |
-67 |
-74 |
-68 |
1.17 |
ChiX |
46 |
53 |
47 |
53 |
0.91 |
-8.9 |
-10.98 |
-0.942652 |
CAAAGAGG&CCUCUUUG |
((((((((&)))))))) |
ACAAAGAGGUGAAAGGCUUUGUGUUCAAUCCCAUGCUGGAACAGGUCUUCAAUAUCAAUACCAUGAGUAAAUAACGUGACCUUCUGGAGUAUUUUACGCCAACGCUGCUGGGGGCUGGUGCUCGUGGUGGCGGGCGUCUGCGUGAUUACG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0302459 |
0.8602904 |
ddpB |
946044 |
putative DD-dipeptide ABC transporter membrane subunit DdpB |
b1550 |
-12 |
-4 |
-12 |
-6 |
1.88 |
ChiX |
44 |
52 |
46 |
52 |
0.86 |
-8.87 |
-11.61 |
-0.939474 |
AAAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
AUCUUUUACACGUUUGCACCAUAUAAUCGACUUACUGUGUAACUGGAAAGUCAUAACAGACUAAAAGAGGAAAUGAUGAAUAUUGAAAACUUAAAAACAAAAGCAGAAGCAGAUAUUUCUGAAUAUAUAACAAAAAAAAUUAUUGAACUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0306951 |
0.8602904 |
gnsB |
946054 |
Qin prophage protein GnsB |
b3118 |
-30 |
-14 |
-30 |
-24 |
6.52 |
ChiX |
42 |
57 |
51 |
57 |
2.73 |
-8.84 |
-18.09 |
-0.936297 |
CCGUCAAUGAGGUAAUU&AAUUCCUCUUUGACGG |
(((((((.((((.((((&)))))))).))))))) |
AGUGGUCGCACAUAUCCUGUUCAUUUCAUUUUGAUACACUUCAUGCCGUCAAUGAGGUAAUUAACGUAGGUCGUUAUGAGCACUAUUCUUCUUCCGAAAACGCAGCACCUGGUAGUCUUUCAGGAAGUCAUUAGAAGUGGUUCUAUCGGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.031151 |
0.8602904 |
tdcA |
947494 |
DNA-binding transcriptional activator TdcA |
b1740 |
59 |
72 |
59 |
65 |
2.83 |
ChiX |
38 |
51 |
45 |
51 |
1.06 |
-8.84 |
-12.73 |
-0.936297 |
AAGAGGAAAUUCGU&AUGAAAUUCCUCUU |
((((((((..((((&))))..)))))))) |
CCGCUGUCGCUUGUCGUUUCAGUAGCAACGGGUUAGCUUUAAGGAAGUUUUGUCUUUUCUGUCUGGAGGGGUUCAAUGACAUUGCAACAACAAAUAAUAAAGGCGCUGGGCGCAAAACCGCAGAUUAAUGCUGAAGAGGAAAUUCGUCGU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.031151 |
0.8602904 |
nadE |
946946 |
NH3-dependent NAD(+) synthetase |
b1732 |
-62 |
-54 |
-62 |
-56 |
1.43 |
ChiX |
47 |
55 |
49 |
55 |
0.89 |
-8.82 |
-11.14 |
-0.934178 |
GUUAGAGAG&CUCUUUGAC |
(((((((((&))))))))) |
CUGGUGGUCUAUAGUUAGAGAGUUUUUUGACCAAAACAGCGGCCCUUUCAGUAAUAAAUUAAGGAGACGAGUUCAAUGUCGCAACAUAACGAAAAGAACCCACAUCAGCACCAGUCACCACUACACGAUUCCAGCGAAGCGAAACCGGGG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0314588 |
0.8602904 |
katE |
946234 |
catalase HPII |
b2457 |
-15 |
-7 |
-14 |
-8 |
1.38 |
ChiX |
44 |
52 |
45 |
51 |
0.86 |
-8.82 |
-11.06 |
-0.934178 |
AAAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
GAACCGCGAAAGCAGUUUACAAACACUGGUUGAAUGAACGGUCCCGUUCUGGACCCUGAUAAAGAGGAAAGCACAAUGGAAGCAUUAGGAAUGAUCGAAACCCGGGGCCUGGUUGCACUGAUUGAGGCUUCUGACGCGAUGGUGAAAGCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0314588 |
0.8602904 |
eutM |
946942 |
putative ethanolamine catabolic microcompartment shell protein EutM |
b4040 |
-14 |
-7 |
-13 |
-7 |
0.5 |
ChiX |
44 |
51 |
44 |
50 |
0.84 |
-8.77 |
-10.11 |
-0.928883 |
AAGAGGAA&UUCCUCUU |
((((((((&)))))))) |
CGAUUAAGCGGUAAACCGCUGUUGCUAACAGAACUGUUUUUACCGGCGUCACCGUUGUACUAAGAGGAAAAAAAUAUGGAGUGGAGUCUGACGCAGAAUAAGCUGCUGGCGUUUCAUCGCUUAAUGCGUACGGAUAAGCCAAUUGGCGCG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0322419 |
0.8602904 |
ubiA |
948540 |
4-hydroxybenzoate octaprenyltransferase |
b1561 |
38 |
73 |
60 |
66 |
6.89 |
ChiX |
44 |
81 |
50 |
56 |
13.56 |
-8.75 |
-29.2 |
-0.926764 |
AAGAUGGCCUCUAUGCUGUGUGCGUUGAAAAUGGAA&UUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUU |
(((((((((..((((((((...(((((((...((((&))))..))))))).....))))).)))..))))))))) |
AAAUACUUAAGUAGCGCGCAGGGAUAAGAGGGAUGGUCCCUUAAAGGGGAGAGCUAAUUAUCCGGAAGGAUUCUGAUGAUGAACAUCGAAGAACUGCGUAAAAUUUUUUGUGAAGAUGGCCUCUAUGCUGUGUGCGUUGAAAAUGGAAAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0325606 |
0.8602904 |
rem |
946109 |
Qin prophage protein Rem |
b3186 |
-14 |
-1 |
-10 |
-4 |
2.67 |
ChiX |
38 |
51 |
41 |
47 |
1.06 |
-8.73 |
-12.46 |
-0.924646 |
AAGCGGAGUUUUAU&AUGAAAUUCCUCUU |
(((.((((((((((&)))))))))).))) |
UAUUCGCGCCCUAUUGUGAAUAUUUAUAGCGCACUCUGAAUCAUUGAAAAGGUGUGCGCGGAAGCGGAGUUUUAUAUGUACGCGGUUUUCCAAAGUGGUGGUAAACAACACCGAGUAAGCGAAGGUCAGACCGUUCGCCUGGAAAAGCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0328826 |
0.8602904 |
rplU |
949057 |
50S ribosomal subunit protein L21 |
b3801 |
-75 |
-58 |
-67 |
-61 |
6.3 |
ChiX |
40 |
55 |
43 |
49 |
1.01 |
-8.71 |
-16.02 |
-0.922528 |
GUCAGGGAGAGGGAUCUC&GAAAUUCCUCUUUGAC |
((((...((((((((.((&)).)))))))).)))) |
GUCAGGGAGAGGGAUCUCAAUUAUCAAUGCUUAAUUACGUCAUCAUUUUGAUGACAUGAAACCGGAGCAUUUUGCAUGGAAUUUUCGUUUUCACCCAAACGUCUUGUUGUUGCUGUCGCCGCCGCUCUUCCUCUCAUGGCCAGCGCAGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0332077 |
0.8602904 |
aslA |
949015 |
putative sulfatase AslA |
b2962 |
-14 |
-7 |
-13 |
-7 |
0.54 |
ChiX |
45 |
52 |
45 |
51 |
0.85 |
-8.71 |
-10.1 |
-0.922528 |
AAAGAGGA&UCCUCUUU |
((((((((&)))))))) |
CCCGUGGAGCGUUUGUUACAGCAGUUACGCACUGGCGCGCCGGUUUAGCGCGUGAGUCGAUAAAGAGGAUGAUUUAUGAGCAGAACGAUUUUUUGUACUUUCCUGCAACGUGAAGCAGAAGGUCAGGAUUUUCAGCUGUACCCCGGCGAG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0332077 |
0.8602904 |
yggX |
947461 |
putative Fe(2(+))-trafficking protein |
b3141 |
41 |
51 |
41 |
47 |
3.69 |
ChiX |
38 |
48 |
42 |
48 |
1.04 |
-8.7 |
-13.43 |
-0.921468 |
AGGAAUUUCAU&AUGAAAUUCCU |
(((((((((((&))))))))))) |
AAAGCGCAUCCGGUGCUGUUAAUCGGCGUGACUUUUGUGCUCUCUAUUGUUUGUUCCGCAUUCGGCAUUUUGUAAAUGGAACGAGGCACUGCGUCUGGUGGUGCCUCUUUACUUAAGGAAUUUCAUCCUGUGCAAACCCUUCAGCAAGUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0333715 |
0.8602904 |
agaI |
947985 |
putative deaminase AgaI |
b2241 |
-12 |
-5 |
-11 |
-5 |
0.65 |
ChiX |
43 |
50 |
43 |
49 |
0.84 |
-8.7 |
-10.19 |
-0.921468 |
AGAGGGAU&AUUCCUCU |
((((((((&)))))))) |
GAAUAUGCGCGAAAUCAAACAAUUCAUGUUUUUACUAUGGCUAAAUGGUAAAAAACGAACUUCAGAGGGAUAACAAUGAAAACUCGCGACUCGCAAUCAAGUGACGUGAUUAUCAUUGGCGGCGGCGCAACGGGAGCCGGGAUUGCCCGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0333715 |
0.8602904 |
glpA |
946713 |
anaerobic glycerol-3-phosphate dehydrogenase subunit A |
b1308 |
-75 |
-65 |
-74 |
-68 |
4.19 |
ChiX |
40 |
50 |
43 |
49 |
0.92 |
-8.69 |
-13.8 |
-0.920409 |
AGGGGAGUUUC&GAAAUUCCUCU |
(((((((((((&))))))))))) |
AGGGGAGUUUCGCAAAAAUUGUUAAAUCUCAGGCGUAUAAUGGAUGGCAAUUUUCAUCCAUAGAAGGACGCUUACAUGUUUAAAAAAGGCUUACUUGCUCUGGCACUGGUGUUUUCACUGCCCGUUUUCGCCGCUGAACACUGGAUCGAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0335361 |
0.8602904 |
pspE |
945652 |
thiosulfate sulfurtransferase PspE |
b0517 |
-18 |
-7 |
-18 |
-12 |
1.46 |
ChiX |
45 |
56 |
50 |
56 |
0.93 |
-8.66 |
-11.05 |
-0.917232 |
CGUUAAAAAGGA&UCCUCUUUGACG |
(((((((.((((&)))).))))))) |
GAUCACAUAAUCCAGAUAUUUUCCCUGUAUGUUAAUUGCAGUCAUGCUUCACACCGUCGUUAAAAAGGAAGACAGAUGAAAAUCAGUCGGGAAACACUCCACCAGCUAAUUGAGAAUAAACUCUGCCAGGCUGGGUUAAAACGUGAGCAC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.034035 |
0.8602904 |
allD |
948342 |
ureidoglycolate dehydrogenase |
b0283 |
-13 |
-3 |
-10 |
-4 |
3.02 |
ChiX |
44 |
54 |
45 |
51 |
0.93 |
-8.65 |
-12.6 |
-0.916173 |
UUAAGGAGGAA&UUCCUCUUUGA |
(((((((((((&))))))))))) |
AUUCGGGUACGGGAUUAUCCCAUCACUCUGGAUAAGCUGCUCGAUAAGCUGCCGGAUGUGGUUUAAGGAGGAACAAUGUCAUACCCGCUUUUUGACAAAGACGAACACUGGCAUAAGCCAGAGCAGGCGUUUCUCACCGAUGACCACCGG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0342029 |
0.8602904 |
paoD |
945010 |
molybdenum cofactor insertion chaperone PaoD |
b2014 |
-73 |
-61 |
-67 |
-61 |
2.9 |
ChiX |
43 |
55 |
43 |
49 |
0.94 |
-8.57 |
-12.41 |
-0.907699 |
GUCGCUGAGGAAU&AUUCCUCUUUGAC |
(((...(((((((&)))))))...))) |
UUGUCGCUGAGGAAUCCAAAAAAAUGGGGCAAUUUUUUGCUUACGCGACGGUUAUCACCGUAAAGGAGAAUGACCAUGUCGCAUAACGUUACUCCAAACACCUCUCGCGUGGAAUUGCGUAAAACGCUUACGUUAGUUCCGGUUGUAAUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.035577 |
0.8602904 |
plaP |
946533 |
putrescine:H(+) symporter PlaP |
b3938 |
-20 |
-12 |
-18 |
-12 |
2.9 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-8.56 |
-12.37 |
-0.90664 |
CGAAGAGGA&UCCUCUUUG |
(((((((((&))))))))) |
GCGGGUUUACGGUCAGUACCCACAUCAACUGUGUGGUCUGGUCUCAAUUUAUUGACGAAGAGGAUUAAGUAUCUCAUGGCUGAAUGGAGCGGCGAAUAUAUCAGCCCAUACGCUGAGCACGGCAAGAAGAGUGAACAAGUCAAAAAGAUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0357527 |
0.8602904 |
metJ |
948435 |
DNA-binding transcriptional repressor MetJ |
b4299 |
-15 |
-7 |
-13 |
-7 |
4.07 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-8.51 |
-13.49 |
-0.901344 |
CAAGGAGGA&UCCUCUUUG |
(((((((((&))))))))) |
CAGCAUGCUGAACAAAGCAUAUUUUCCACUAUGUAAUGCCGAUACCAUUUAUUCCAUGAGCAAGGAGGAGCCAUUAUGGUUCGCAAAGGGUGUAAUUCAUUAGUCCGUGCUGAAAAAAUAUUAACCCACAUUGCAUGGGUUGGUAUGGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0366442 |
0.8602904 |
yjhI |
949100 |
KpLE2 phage-like element putative DNA-binding transcriptional regulator YjhI |
b0141 |
-22 |
-12 |
-22 |
-16 |
1.45 |
ChiX |
37 |
47 |
41 |
47 |
1.04 |
-8.49 |
-10.98 |
-0.899226 |
GGAAUUUUAUU&AAUGAAAUUCC |
(((((((((((&))))))))))) |
UUCUCCUAUUUGUGUCAUGAAUAGUCAUUCUUCAAACAUGUAGUCUGACUAAUGGAAUUUUAUUAAAGGAUUUUUAUGUCUAAAAAAUUAGGUUUUGCCCUGUCUGGUCUUAUGCUGGCGAUGGUUGCAGGUACUGCUUCUGCUGAUAUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0370071 |
0.8602904 |
yadN |
944841 |
putative fimbrial protein YadN |
b2768 |
44 |
53 |
46 |
52 |
1.52 |
ChiX |
48 |
57 |
49 |
55 |
2.73 |
-8.45 |
-12.7 |
-0.894989 |
CCGUUAAAGA&UCUUUGACGG |
((((((((((&)))))))))) |
CACUACAACAGUGGCGCUAUCCGCCUUCCGGAUUCGGCAUCACCUACCGCUUUGGAUAAAUAAUAAGGAUAAUUUAUGCCCCUCUUACACCUGCUCCGCCAGAAUCCGGUGAUUGCUGCCGUUAAAGAUAAUGCCAGCCUGCAACUGGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0377438 |
0.8602904 |
ygcP |
947536 |
putative anti-terminator regulatory protein |
b0094 |
-45 |
-38 |
-45 |
-39 |
0.52 |
ChiX |
43 |
50 |
44 |
50 |
0.84 |
-8.44 |
-9.8 |
-0.89393 |
AGAGGAAU&AUUCCUCU |
((((((((&)))))))) |
AGCGGCAGUAGGCUGGGCGCCCUUGCCGCCAGAGGAAUCUACUCAGCAACAAAAUCAGGCACAGGCAGAACAACAAUGAUCAAGGCGACGGACAGAAAACUGGUAGUAGGACUGGAGAUUGGUACCGCGAAGGUUGCCGCUUUAGUAGGG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0379302 |
0.8602904 |
ftsA |
944778 |
cell division protein FtsA |
b4047 |
-37 |
-30 |
-37 |
-31 |
0.3 |
ChiX |
45 |
52 |
46 |
52 |
0.85 |
-8.42 |
-9.57 |
-0.891812 |
AAGGAGGA&UCCUCUUU |
((((((((&)))))))) |
AGCGAUUUUUGAUAGUGACCAGAUGGCAAAAGAAUUAUAAGGAGGACACGGUACGACAAAAAAGGUAGAUGAAUCAUGUUGAAGAUAAUACCCGGUGCAACUGGAUACUUUAAUAAAACACUCAAUUCAAAUCAAUUCGAUAAUGAAGAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.038306 |
0.8602904 |
yjbL |
948551 |
uncharacterized protein YjbL |
b2705 |
-15 |
-7 |
-15 |
-9 |
1.54 |
ChiX |
47 |
55 |
49 |
55 |
0.89 |
-8.4 |
-10.83 |
-0.889694 |
GUUAAGGAG&CUCUUUGAC |
(((((((((&))))))))) |
CAUGUGGCAGGCCCUGUCCCCGACGAUAUCGCGCCGGGAUCGGUUUUGAAGUUUGAAUCUGUUAAGGAGUAAAAAAUGAAUCAGGUUGCCGUUGUCAUCGGUGGUGGGCAAACCUUAGGCGCGUUCCUGUGCCACGGUCUGGCUGCCGAG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0386856 |
0.8602904 |
srlD |
948937 |
sorbitol-6-phosphate 2-dehydrogenase |
b0793 |
45 |
54 |
46 |
52 |
3.38 |
ChiX |
47 |
56 |
49 |
55 |
0.91 |
-8.36 |
-12.65 |
-0.885457 |
CGUUAAAGAG&CUCUUUGACG |
((((((((((&)))))))))) |
ACGAUGAGCAACCCGAUCCCACCAUGGAGCAAGCCUUUAUUCAGUUGAUCCACGACUGGGAUAAGGAGCAUAGCAAUGAGUAACCCGAUCCUGUCCUGGCGUCGCGUACGGGCGCUGUGCGUUAAAGAGACGCGGCAGAUCGUUCGCGAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0394561 |
0.8602904 |
ybhS |
945411 |
ABC exporter membrane subunit YbhS |
b2216 |
-75 |
-60 |
-68 |
-62 |
2.37 |
ChiX |
39 |
52 |
41 |
47 |
1.05 |
-8.35 |
-11.77 |
-0.884398 |
AGAGUCUGGAAUUUCA&UGAAAUUCCUCUUU |
((((...(((((((((&))))))))).)))) |
AGAGUCUGGAAUUUCACACUGUACCCUUUAUACUGCCCUAUCACUUCGCGAAGUUUUAACAGGUCAUAAACACGAAUGCGUCAGAAAGAGACAACGGCCACGACCCGCUUUUCACUCCUACCGGGGAGCAUUACCCGCUUCUUUUUACUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0396511 |
0.8602904 |
rcsD |
946717 |
RcsD phosphotransferase |
b2231 |
-17 |
-10 |
-16 |
-10 |
0.49 |
ChiX |
43 |
50 |
43 |
49 |
0.84 |
-8.35 |
-9.68 |
-0.884398 |
AGAGGGAU&AUUCCUCU |
((((((((&)))))))) |
UUUACCUCAAACUGCGCGGCUGUGUUAUAAUUUGCGACCUUUGAAUCCGGGAUACAGUAGAGGGAUAGCGGUUAGAUGAGCGACCUUGCGAGAGAAAUUACACCGGUCAACAUUGAGGAAGAGCUGAAGAGCUCCUAUCUGGAUUAUGCG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0396511 |
0.8602904 |
gyrA |
946614 |
DNA gyrase subunit A |
b1071 |
-17 |
-6 |
-12 |
-6 |
4.12 |
ChiX |
43 |
54 |
43 |
49 |
0.94 |
-8.34 |
-13.4 |
-0.883339 |
UCAAUGAGGAAU&AUUCCUCUUUGA |
((((.(((((((&))))))).)))) |
GCUGUUAAAGAUUACCCGUCCCUUGCCGAUAAAUAAGCAACACAUGAUAAAAGCGCCCUCAAUGAGGAAUAAACCAUGAGUAUUGAUCGCACUUCGCCUCUGAAGCCUGUAAGCACCGUUCAACCGCGCGAAACCACUGACGCGCCGGUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0398471 |
0.8602904 |
flgM |
946684 |
anti-sigma factor for FliA (sigma(28)) |
b1736 |
-15 |
-7 |
-15 |
-9 |
2.28 |
ChiX |
44 |
52 |
46 |
52 |
0.86 |
-8.33 |
-11.47 |
-0.88228 |
AGAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
UAUCGCUAACGCCCUGAAAUUUUAAUCGAUGCCGGUACGGGUAAUCGUGCCGGUAAGAAAAGAGAGGAACGAUGUAUGAUGGAUCUCGAUAACAUUCCCGAUACGCAAACGGAAGCUGAAGAGCUGGAAGAAGUGGUGAUGGGGCUGAUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0400441 |
0.8602904 |
chbA |
946244 |
NN'-diacetylchitobiose-specific PTS enzyme IIA component |
b1175 |
-10 |
-2 |
-10 |
-4 |
1.82 |
ChiX |
40 |
48 |
42 |
48 |
0.89 |
-8.33 |
-11.04 |
-0.88228 |
AGGAAUUUC&GAAAUUCCU |
(((((((((&))))))))) |
GGCGCGACUGCAGUUAGUCGAAAACGCUUUGACCGUUCAACCGUUAAAUUGAUCCCUUUUUAACAAGGAAUUUCUAUGGCACGCAUUAUUGUUGUUACUUCGGGCAAAGGGGGUGUUGGUAAGACAACCUCCAGCGCGGCCAUCGCCACU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0400441 |
0.8602904 |
minD |
945741 |
Z-ring positioning protein MinD |
b0542 |
9 |
27 |
10 |
16 |
3.59 |
ChiX |
38 |
53 |
46 |
52 |
1.15 |
-8.3 |
-13.04 |
-0.879102 |
CAAAGAGGCAAUUAUUCAU&AUGAAAUUCCUCUUUG |
((((((((.((((..((((&)))))))))))))))) |
ACCUCUAAAUCGUGCACAGGCUCUGGCGAAGAUCGCAGAAAUUAAAGCUAAGUUCGGACUGAAAGGAGCAAGUGUAUGACGGGCAAAGAGGCAAUUAUUCAUUACCUGGGGACGCAUAAGAGCUUCUGUGCACAGGACGUUGCCGCGGUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.040641 |
0.8602904 |
renD |
945024 |
DLP12 prophage protein RenD |
b1314 |
65 |
72 |
66 |
72 |
1.12 |
ChiX |
47 |
54 |
47 |
53 |
0.89 |
-8.3 |
-10.31 |
-0.879102 |
UCAAAGAG&CUCUUUGA |
((((((((&)))))))) |
AUGCAGUAUGUCGACCAGCAUCCGGAACAGAGCAUCAAAAUGGGCGUUACGUUUUAAUUCAAAGGAAUGAAAAAAAUGAAAAUCGGCACACAGAAUCAGGCGUUCUUUCCGGAAAACAUUCUGGAGAAAUUUCGUUAUAUCAAAGAGAUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.040641 |
0.8602904 |
ycjR |
947427 |
3-dehydro-D-guloside 4-epimerase |
b1571 |
-23 |
-12 |
-22 |
-16 |
3.62 |
ChiX |
44 |
56 |
49 |
55 |
0.94 |
-8.29 |
-12.85 |
-0.878043 |
CGUUAAGGGGAA&UUCCUCUUUGACG |
((((((((((((&)))).)))))))) |
UUUGCAUCAACACACCGCACGGUGUUCUCAGCAAACAGUUCCGCUACCCCAGCGUUAAGGGGAAAUGAGGUCAGCAUGGAUACUAUCGAUCUUGGCAACAACGAAUCUCUGGUGUACGGCGUGUUUCCAAACCAGGACGGCACGUUCACC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.040842 |
0.8602904 |
ydfA |
946082 |
Qin prophage DUF1391 domain-containing protein YdfA |
b2483 |
-32 |
-8 |
-28 |
-22 |
6.92 |
ChiX |
45 |
75 |
63 |
69 |
11.33 |
-8.27 |
-26.52 |
-0.875925 |
GCUAAUCGCUAUUGCCGUCUAAGGA&UCCUCUUUGACGGGCCAAUAGCGAUAUUGGC |
(((((((((((((((((((..((((&))))....)))).)).)))))))))..)))) |
UUCGUCUCUAUUGCCUGUAUGUGGUCGCCGCACUGGUUGUGCUGCUAAUCGCUAUUGCCGUCUAAGGAAAUCACCAUGAGACAAACUCUUUGCGACGGAUAUCUGGUCAUUUUUGCGUUAGCACAGGCCGUGAUUCUGCUGAUGCUAACC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0412469 |
0.8602904 |
hyfC |
947492 |
hydrogenase 4 component C |
b0115 |
64 |
73 |
64 |
70 |
3.29 |
ChiX |
46 |
55 |
49 |
55 |
0.92 |
-8.26 |
-12.47 |
-0.874865 |
GUCAAAGUGG&CCUCUUUGAC |
(((((((.((&)).))))))) |
UGCUGACGCAAUCGCCAAAUUCAACAUCGAUGCAGAUAAAGUUAACCCGCGUCUGGCGUAAGAGGUAAAAGAAUAAUGGCUAUCGAAAUCAAAGUACCGGACAUCGGGGCUGAUGAAGUUGAAAUCACCGAGAUCCUGGUCAAAGUGGGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0414509 |
0.8602904 |
aceF |
944794 |
pyruvate dehydrogenase E2 subunit |
b0321 |
-18 |
-10 |
-16 |
-10 |
3.45 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-8.26 |
-12.62 |
-0.874865 |
CAAAGGGGA&UCCUCUUUG |
(((((((((&))))))))) |
AGUGAUUCUGGCGAGCAGCAGCACCAAUACCGGAUUGCUGGCGCGUGAAUUUAUCUGCAAAGGGGAGGAAGCCUGAUGAGCCAGUCACUGUUUAGCCAACCAUUGAACGUUAUUAACGUCGGCAUCGCCAUGUUUAGCGAUGACCUGAAA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0414509 |
0.8602904 |
yahG |
945379 |
DUF1116 domain-containing protein YahG |
b2779 |
-37 |
-29 |
-37 |
-31 |
1.99 |
ChiX |
39 |
47 |
41 |
47 |
1 |
-8.24 |
-11.23 |
-0.872747 |
GGAGUUUCA&UGAAAUUCC |
(((((((((&))))))))) |
GAGCGGCAACGCGUACCCUGGGUACGCGUUGUUUGUCUGGAGUUUCAGUUUAACUAGUGACUUGAGGAAAACCUAAUGUCCAAAAUCGUAAAAAUCAUCGGUCGUGAAAUCAUCGACUCCCGUGGUAACCCGACUGUUGAAGCCGAAGUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.041862 |
0.8602904 |
eno |
945032 |
enolase |
b0228 |
26 |
36 |
27 |
33 |
4.14 |
ChiX |
44 |
54 |
47 |
53 |
0.93 |
-8.24 |
-13.31 |
-0.872747 |
UCAAGGGGGGA&UUCCUCUUUGA |
(((((((((((&))))))))))) |
GCCGCUUUCCCGAUAUAAAACAACCUCAUUGCCAACCUUUCCUUUUCUUCUUACCGUUGAGAAAAAGGAGUCGCCAUGUCUGAAUAUCGUCGUUAUUACAUCAAGGGGGGAACAUGGUUUUUCACGGUGAAUUUACGAAAUCGUCGAAGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.041862 |
0.8602904 |
rayT |
944913 |
REP-associated tyrosine transposase |
b4337 |
-48 |
-37 |
-48 |
-42 |
1.54 |
ChiX |
35 |
46 |
40 |
46 |
1.02 |
-8.23 |
-10.79 |
-0.871688 |
GAAUUUCGUUUU&AAAAUGAAAUUC |
((((((((((((&)))))))))))) |
CUGCCUUUCGUCAUUACCGACGGUAUUGAAUUUCGUUUUCCCCGUUGGGGUUCUCCGGACAAGGAGUUGUUUGUUAUGCCACGUUUUUUUACCCGCCAUGCCGCCACGCUGUUUUUCCCGAUGGCGUUGAUUUUGUAUGACUUUGCUGCG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.042069 |
0.8602904 |
mdtM |
948861 |
multidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter |
b0755 |
-13 |
-7 |
-13 |
-7 |
0.68 |
ChiX |
43 |
49 |
43 |
49 |
0.82 |
-8.2 |
-9.7 |
-0.86851 |
GAGGAGU&AUUCCUC |
(((((((&))))))) |
AAGCAUUGCUGUUGCUUCGUCGCGGCAAUAUAAUGAGAAUUAUUAUCAUUAAAAGAUGAUUUGAGGAGUAAGUAUAUGGCUGUAACUAAGCUGGUUCUGGUUCGUCAUGGCGAAAGUCAGUGGAACAAAGAAAACCGUUUCACCGGUUGG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0426964 |
0.8602904 |
gpmA |
945068 |
23-bisphosphoglycerate-dependent phosphoglycerate mutase |
b1872 |
-14 |
-4 |
-12 |
-6 |
5.09 |
ChiX |
44 |
54 |
46 |
52 |
0.93 |
-8.18 |
-14.2 |
-0.866392 |
UCAGGGAGGAA&UUCCUCUUUGA |
(((((((((((&))))))))))) |
UUAACGCGGUAUUUCCAGUACAACGCCAAAGAUAUUACCGAGAAACAGUGAUCCUCGUUGAUCAGGGAGGAAGUUAUGACAUUAACAAGACGUGAAUUUAUUAAACACAGCGGUAUUGCCGCUGGAGCGCUGGUGGUGACAUCGGCAGCA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0431199 |
0.8602904 |
torZ |
946389 |
trimethylamine N-oxide reductase 2 |
b3304 |
-31 |
-24 |
-31 |
-25 |
2.11 |
ChiX |
46 |
53 |
47 |
53 |
0.91 |
-8.16 |
-11.18 |
-0.864274 |
CAAAGAGG&CCUCUUUG |
((((((((&)))))))) |
UAUAAAGGCAAGGGUGUUCGUUACGCCGACGAAGUCGUGCGUACCAAAGAGGCUAAGAAGAAGUAAGGUAACACUAUGGAUAAGAAAUCUGCUCGUAUCCGUCGUGCGACCCGCGCACGCCGCAAGCUCCAGGAGCUGGGCGCAACUCGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0435477 |
0.8602904 |
rplR |
947804 |
50S ribosomal subunit protein L18 |
b0317 |
-14 |
-5 |
-13 |
-7 |
4.58 |
ChiX |
44 |
53 |
46 |
52 |
0.92 |
-8.12 |
-13.62 |
-0.860037 |
CAGAGGGGAA&UUCCUCUUUG |
((((((((((&)))))))))) |
CAAUCAGGUUUUAUUUCUCUAUAGUCUGCACAUGUAAGAGUAGCUUUCGUCCAUGUCUAACCAGAGGGGAACAAGAUGAACGGACUCACGGCAACGGGUGUCACCGUCGGUAUUUGUGCAGGGCUUUGGCAGUUAGUGUCUUCACAUGUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0444161 |
0.8602904 |
yahC |
947337 |
uncharacterized protein YahC |
b1257 |
-15 |
2 |
-14 |
-8 |
4.93 |
ChiX |
38 |
52 |
45 |
51 |
1.06 |
-8.11 |
-14.1 |
-0.858978 |
AAAGAGGACAUUUUCAU&AUGAAAUUCCUCUUU |
((((((((...((((((&)))))).)))))))) |
GUAAAUAAGAAAGCCGAAAAUAAAGCCUGAAAUAUGAAUUUUAACUUUUAGUCAUUUUAUAAAGAGGACAUUUUCAUGAAUCGUAUUGAACAUUAUCAUGACUGGUUACGUGACGCCCACGCAAUGGAAAAGCAAGCCGAAUCUAUGCUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0446359 |
0.8602904 |
yciE |
946871 |
DUF892 domain-containing protein YciE |
b2420 |
60 |
68 |
62 |
68 |
3.12 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-8.11 |
-12.14 |
-0.858978 |
CGAAGGGGA&UCCUCUUUG |
(((((((((&))))))))) |
AAUUGCGCAGACGGAUAAAACGGUGCCUGCGGAAGGAAAUUAAUCCGCUUUGGGAAGGCAUUUACAGGAGGUAACAUGAAAAAACGCUUUAUUUAUCACGAUGAAAAAUCGAAUAAAUUUUGGUGGAUAGAUUACGAAGGGGAUAGUUUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0446359 |
0.8602904 |
yfeS |
946887 |
PF05406 family protein YfeS |
b0537 |
-12 |
-6 |
-12 |
-6 |
0.42 |
ChiX |
44 |
50 |
44 |
50 |
0.82 |
-8.09 |
-9.33 |
-0.85686 |
AGAGGAA&UUCCUCU |
(((((((&))))))) |
CUGCAUUGCGGCGCUUCAGUCUCCGCUGCAUACUGUCCAGGUGAGCGCGGGUGAUGGCAUAACAGAGGAAAGAAAAUGUCACUCUUCCGCAGAAAUGAAAUAUGGUAUGCCUCGUAUUCGCUCCCGGGCGGGAAACGAAUUAAGGAAUCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0450788 |
0.8602904 |
intD |
947162 |
DLP12 prophage putative integrase |
b0924 |
-15 |
-6 |
-12 |
-6 |
4.77 |
ChiX |
44 |
53 |
44 |
50 |
0.92 |
-8.09 |
-13.78 |
-0.85686 |
CGGAGAGGAA&UUCCUCUUUG |
((((((((((&)))))))))) |
AAUGCCGAUUGAAAAUCAUCUGCAACUCAACGAUGAAACCGAAGAGAAUCAGCCAGAUAGCGGAGAGGAAGAAUAAUGAUUGAACGCGGUAAAUUUCGCUCACUGACGCUGAUUAACUGGAACGGCUUUUUUGCCCGAACUUUUGACCUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0450788 |
0.8602904 |
mukB |
945549 |
chromosome partitioning protein MukB |
b1957 |
31 |
40 |
34 |
40 |
4.82 |
ChiX |
46 |
55 |
46 |
52 |
0.92 |
-8.08 |
-13.82 |
-0.855801 |
GUUAAAGAGG&CCUCUUUGAC |
((((((((((&)))))))))) |
UCGCACUGGCUAUUAUGCAAAAUUCGCCAUCUUCAACUAAGGUGAACAAGUUUCACUCGAAAAAAGGAGGCGAGUAUGAGCUUUAUGGUUAGUGAGGAAGUUACGGUUAAAGAGGGCGGCCCGCGGAUGAUUGUCACUGGAUACUCCAGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0453019 |
0.8602904 |
yodC |
946466 |
protein YodC |
b1831 |
-42 |
2 |
-5 |
2 |
9.59 |
ChiX |
38 |
75 |
38 |
44 |
13.6 |
-8.05 |
-31.24 |
-0.852623 |
GCCUGCGCUUGUUGGCUACGUCCGUUGUAAUCAGGAAAUUUCAU&AUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGC |
(((..(((.(((((((..((((......((..((((.(((((((&)))))))))))..)))))).)))))))))).....))) |
ACUGAUAGCGUCAUUAUAAUGACGCCUGUUCAUGCCUGCGCUUGUUGGCUACGUCCGUUGUAAUCAGGAAAUUUCAUGGAAAAUCAACCUAAGUUGAAUAGCAGUAAAGAAGUAAUCGCGUUUCUGGCCGAACGUUUUCCCCACUGUUUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0459779 |
0.8602904 |
proQ |
948950 |
RNA chaperone ProQ |