Freiburg RNA Tools
DiGI - Results
BIF
IFF
DiGI 6806732

Input and runtime details for job 6806732 (precomputed example)

Gene list

? Gene list to extend[.fa]

Network Decomposition

? Clique Threshold 4
? Degree Threshold 10

Vectorization

? Distance 2
? Radius 1

Job ID 6806732 (server version trunk)

?Job Submitted & Queued@ Tue Mar 16 17:46:51 CET 2021
?DiGI Started@ Tue Mar 16 17:47:09 CET 2021
?DiGI Finished & Post-Processing@ Tue Mar 16 17:47:55 CET 2021
?Post-Processing Finished@ Tue Mar 16 17:47:56 CET 2021
?Job Completed@ Tue Mar 16 17:48:00 CET 2021
 DIRECT ACCESS: http://rna.informatik.uni-freiburg.de/RetrieveResults.jsp?jobID=6806732&toolName=DiGI ( 30 days expiry )

Description of the job

some test input

Output download complete results [zip]

Predicted genes (top predictions only, see above link for full table)

Sort by selecting a column name.
Gene Score Neigh(Pathways)
TRHDE 0.2721
GPRC5C 0.2471
GDPD2 0.2355
TCF12 0.4151
WNK2 0.4863
TRPM7 0.4577
TRPC4AP 0.4325
MYO5B 0.4222
SLCO1C1 0.3858
TRDN 0.3738
SLC30A3 0.359
TRPV2 0.3508
TRPM2 0.347
TSC22D3 0.334
TRPV5 0.3223
SLC4A7 0.3047
SLC6A9 0.2978
WNK4 0.2875
SLC39A1 0.2795
SLC16A10 0.2791
SLC26A6 0.2617
SLC4A3 0.2559
SLC9A2 0.2302
SLC22A6 0.2535
BEST1 0.259
SLC22A4 0.2625
SLC12A4 0.2736
CLCN3 0.277
ATP2B4 0.2809
SGK2 0.2951
FXYD3 0.3006
SLC35A2 0.3129
SLC12A6 0.3172
SGK3 0.3217
SLC4A2 0.33
OSTM1 0.3337
CLCN7 0.334
TRPV4 0.3344
SCNN1D 0.3368
SLC4A8 0.3501
SLC1A4 0.3585
SLC26A3 0.3653
SLC22A5 0.3684
FXYD7 0.3698
SLC17A1 0.3804
SLC1A5 0.3959
SCNN1A 0.3962
FXYD6 0.4121
TRPC7 0.2812
TRPC3 0.3231
ATP7B 0.4382
SLC40A1 0.4767
MFAP4 0.2922
LRP4 0.2478
PTPRS 0.2426
PPBP 0.2343
RXFP1 0.2534
RHOJ 0.2475
WNT3A 0.2381
PTH1R 0.2302
RGS1 0.2277
APLN 0.2534
ABR 0.2675
STARD13 0.2866
CLDN6 0.2361
KIAA1598 0.3412
COL4A1 0.34
SPTBN4 0.3084
RHOB 0.2725
ROCK1 0.2575
SRGAP2 0.2541
ARHGEF12 0.2307
NCK2 0.2574
ACVR1C 0.2602
SCN5A 0.2749
DPYSL4 0.2725
CRMP1 0.2718
SCN2A 0.2652
MEF2B 0.2617
SCN8A 0.2601
SPTA1 0.2326
SCN3A 0.229
GFRA2 0.2274
ANK1 0.2307
PSPN 0.2576
DPYSL3 0.2652
KLF5 0.2653
ANK3 0.2687
NKX2-2 0.2729
ITGA2B 0.2617
ITGB3 0.2597
COL6A1 0.2439
ARTN 0.2889
SCN1B 0.3158
CD24 0.3244
ANK2 0.3294
EBF1 0.3468
COL4A2 0.3485
CAP2 0.3716
CLIC2 0.5314

Neighborhood of selected gene in respective data source

Neigh(HPRD)
Neigh(BioGPS)
Neigh(Pathways)

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Feeds the job parameters to the input page to resubmit the job.

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Results are computed with DiGI version 1.0.0