Freiburg RNA Tools
DiGI - Results
BIF
IFF
DiGI 6806732

Input and runtime details for job 6806732 (precomputed example)

Gene list

? Gene list to extend[.fa]

Network Decomposition

? Clique Threshold 4
? Degree Threshold 10

Vectorization

? Distance 2
? Radius 1

Job ID 6806732 (server version trunk)

?Job Submitted & Queued@ Tue Mar 16 17:46:51 CET 2021
?DiGI Started@ Tue Mar 16 17:47:09 CET 2021
?DiGI Finished & Post-Processing@ Tue Mar 16 17:47:55 CET 2021
?Post-Processing Finished@ Tue Mar 16 17:47:56 CET 2021
?Job Completed@ Tue Mar 16 17:48:00 CET 2021
 DIRECT ACCESS: http://rna.informatik.uni-freiburg.de/RetrieveResults.jsp?jobID=6806732&toolName=DiGI ( 30 days expiry )

Description of the job

some test input

Output download complete results [zip]

Predicted genes (top predictions only, see above link for full table)

Sort by selecting a column name.
Gene Score Neigh(BioGPS)
SLCO1C1 0.3858
SLC1A4 0.3585
KIAA1598 0.3412
SCNN1D 0.3368
MFAP4 0.2922
ARTN 0.2889
NKX2-2 0.2729
TRHDE 0.2721
ABR 0.2675
APLN 0.2534
RXFP1 0.2534
GPRC5C 0.2471
SLC4A3 0.2559
SPTBN4 0.3084
SCN2A 0.2652
SCN1B 0.3158
TRPM7 0.4577
SLC30A3 0.359
SLC22A6 0.2535
RHOB 0.2725
TRDN 0.3738
SLC12A4 0.2736
FXYD7 0.3698
WNK2 0.4863
FXYD6 0.4121
SLC4A2 0.33
TRPV5 0.3223
CAP2 0.3716
ATP2B4 0.2809
SLC4A7 0.3047
SLC4A8 0.3501
TRPC4AP 0.4325
OSTM1 0.3337
WNK4 0.2875
COL4A2 0.3485
COL4A1 0.34
ROCK1 0.2575
PPBP 0.2343
MYO5B 0.4222
NCK2 0.2574
LRP4 0.2478
RHOJ 0.2475
DPYSL3 0.2652
DPYSL4 0.2725
SLC6A9 0.2978
GFRA2 0.2274
PSPN 0.2576
RGS1 0.2277
SCN8A 0.2601
SLC40A1 0.4767
SGK3 0.3217
KLF5 0.2653
TSC22D3 0.334
ACVR1C 0.2602
ITGB3 0.2597
ITGA2B 0.2617
TRPM2 0.347
COL6A1 0.2439
SCN3A 0.229
TRPC7 0.2812
SCNN1A 0.3962
ANK2 0.3294
CLCN7 0.334
TRPV4 0.3344
EBF1 0.3468
SGK2 0.2951
SLC17A1 0.3804
SLC26A6 0.2617
CLCN3 0.277
SLC22A5 0.3684
SLC22A4 0.2625
SLC35A2 0.3129
ARHGEF12 0.2307
BEST1 0.259
PTH1R 0.2302
PTPRS 0.2426
SLC16A10 0.2791
SRGAP2 0.2541
CRMP1 0.2718
ANK3 0.2687
CD24 0.3244
FXYD3 0.3006
GDPD2 0.2355
SLC39A1 0.2795
ANK1 0.2307
TRPC3 0.3231
SPTA1 0.2326
SLC26A3 0.3653
STARD13 0.2866
SCN5A 0.2749
SLC9A2 0.2302
SLC12A6 0.3172
SLC1A5 0.3959
TCF12 0.4151
MEF2B 0.2617
CLDN6 0.2361
CLIC2 0.5314
TRPV2 0.3508
WNT3A 0.2381
ATP7B 0.4382

Neighborhood of selected gene in respective data source

Neigh(HPRD)
Neigh(BioGPS)
Neigh(Pathways)

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Feeds the job parameters to the input page to resubmit the job.

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Results are computed with DiGI version 1.0.0