181 |
0.01309 |
0.2504 |
b2799 |
fucO |
-15.36 |
0.022654 |
183 -- 205 |
1 -- 21 |
L-1 2-propanediol oxidoreductase |
|
_____________182_____________________206\n_____________|_______________________|\n5'-CUU...GUAAA___A__________G_U_A____UAACA...CGC-3'\n______________GCA_CAAGGAGAAG_A_G_UGGC\n______________:||_|||:||:|||_|_|_||||\n______________UGU_GUUUCUUUUC_U_C_ACCG\n3'-UUU...ACCCC___A__________G________-5'\n_____________|______________________|\n_____________22_____________________1\n |
190 -- 196 |
8 -- 14 |
-20.3858 kcal/mol |
3.51699 kcal/mol |
1.51103 kcal/mol |
182 206@LB@ | |@LB@5'-CUU...GUAAA A G U A UAACA...CGC-3'@LB@ GCA CAAGGAGAAG A G UGGC@LB@ :|| |||:||:||| | | ||||@LB@ UGU GUUUCUUUUC U C ACCG@LB@3'-UUU...ACCCC A G -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -15.36 kcal/mol@LB@Hybridization Energy -20.3858 kcal/mol@LB@Unfolding Energy - mRNA 3.51699 kcal/mol@LB@Unfolding Energy - sRNA 1.51103 kcal/mol@LB@@LB@Position - mRNA 183 -- 205@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 8 -- 14@LB@ |
182 |
0.01317 |
0.2504 |
b2101 |
yegW |
-15.40 |
0.022099 |
126 -- 162 |
3 -- 28 |
putative DNA-binding transcriptional regulator |
|
_____________125______________________________________163\n_____________|________________________________________|\n5'-CGG...UCGUU_________________AACGCCUUAAAUAA_________AUAUA...AAA-3'\n______________GAUGGG___AUUAAAGA______________GAAGCAGUG\n______________:|||||___||:|||||______________:||||||||\n______________UUACCC___UAGUUUCU______________UUUCGUCAC\n3'-UUU...GUGUU______CUG_______________________________CG-5'\n_____________|________________________________________|\n_____________29_______________________________________2\n |
156 -- 162 |
3 -- 9 |
-24.3736 kcal/mol |
6.45453 kcal/mol |
2.51813 kcal/mol |
125 163@LB@ | |@LB@5'-CGG...UCGUU AACGCCUUAAAUAA AUAUA...AAA-3'@LB@ GAUGGG AUUAAAGA GAAGCAGUG@LB@ :||||| ||:||||| :||||||||@LB@ UUACCC UAGUUUCU UUUCGUCAC@LB@3'-UUU...GUGUU CUG CG-5'@LB@ | |@LB@ 29 2@LB@@LB@@LB@Energy -15.40 kcal/mol@LB@Hybridization Energy -24.3736 kcal/mol@LB@Unfolding Energy - mRNA 6.45453 kcal/mol@LB@Unfolding Energy - sRNA 2.51813 kcal/mol@LB@@LB@Position - mRNA 126 -- 162@LB@Position - sRNA 3 -- 28@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 3 -- 9@LB@ |
183 |
0.01318 |
0.2504 |
b4483 |
tatD |
-12.95 |
0.080004 |
100 -- 117 |
8 -- 25 |
quality control of Tat-exported FeS proteins; Mg-dependent cytoplasmic DNase |
|
_____________99__________________118\n_____________|___________________|\n5'-CUG...GUAAA___C__A____________GAAAA...UCA-3'\n______________GGG_GA_AUC_GGGAAGAG\n______________|||_||_|||_::|||:||\n______________CCC_CU_UAG_UUCUUUUC\n3'-UUU...UUUUA______G___U________GUCACCG-5'\n_____________|___________________|\n_____________26__________________7\n |
111 -- 117 |
8 -- 14 |
-16.1661 kcal/mol |
2.51597 kcal/mol |
0.697717 kcal/mol |
99 118@LB@ | |@LB@5'-CUG...GUAAA C A GAAAA...UCA-3'@LB@ GGG GA AUC GGGAAGAG@LB@ ||| || ||| ::|||:||@LB@ CCC CU UAG UUCUUUUC@LB@3'-UUU...UUUUA G U GUCACCG-5'@LB@ | |@LB@ 26 7@LB@@LB@@LB@Energy -12.95 kcal/mol@LB@Hybridization Energy -16.1661 kcal/mol@LB@Unfolding Energy - mRNA 2.51597 kcal/mol@LB@Unfolding Energy - sRNA 0.697717 kcal/mol@LB@@LB@Position - mRNA 100 -- 117@LB@Position - sRNA 8 -- 25@LB@Position Seed - mRNA 111 -- 117@LB@Position Seed - sRNA 8 -- 14@LB@ |
184 |
0.0132 |
0.2504 |
b2897 |
sdhE |
-10.91 |
0.194803 |
203 -- 220 |
7 -- 23 |
flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair |
|
_____________202________________221\n_____________|__________________|\n5'-GUA...AAGAU_________CAAC_____CCGCA...ACA-3'\n______________GGACAUUAA____AAAGC\n______________||||||:||____|||||\n______________CCUGUAGUU____UUUCG\n3'-UUU...UUACC_________UCU______UCACCG-5'\n_____________|__________________|\n_____________24_________________6\n |
205 -- 211 |
15 -- 21 |
-14.6885 kcal/mol |
3.17611 kcal/mol |
0.599063 kcal/mol |
202 221@LB@ | |@LB@5'-GUA...AAGAU CAAC CCGCA...ACA-3'@LB@ GGACAUUAA AAAGC@LB@ ||||||:|| |||||@LB@ CCUGUAGUU UUUCG@LB@3'-UUU...UUACC UCU UCACCG-5'@LB@ | |@LB@ 24 6@LB@@LB@@LB@Energy -10.91 kcal/mol@LB@Hybridization Energy -14.6885 kcal/mol@LB@Unfolding Energy - mRNA 3.17611 kcal/mol@LB@Unfolding Energy - sRNA 0.599063 kcal/mol@LB@@LB@Position - mRNA 203 -- 220@LB@Position - sRNA 7 -- 23@LB@Position Seed - mRNA 205 -- 211@LB@Position Seed - sRNA 15 -- 21@LB@ |
185 |
0.0132 |
0.2504 |
b2009 |
sbmC |
-15.75 |
0.018057 |
263 -- 294 |
1 -- 27 |
DNA gyrase inhibitor |
|
_____________262______________________________295\n_____________|________________________________|\n5'-CUG...GGCCC_____AACA____G___________UU__A__AGUUGA-3'\n______________GUGGG____GACG_UAAAGAAAGGC__UG_GC\n______________:||||____|||:_:|||||||:||__||_||\n______________UACCC____CUGU_GUUUCUUUUCG__AC_CG\n3'-UUU...UGUUU_____________A___________UC_____-5'\n_____________|_______________________________|\n_____________28______________________________1\n |
281 -- 287 |
7 -- 13 |
-27.1244 kcal/mol |
8.85955 kcal/mol |
2.51867 kcal/mol |
262 295@LB@ | |@LB@5'-CUG...GGCCC AACA G UU A AGUUGA-3'@LB@ GUGGG GACG UAAAGAAAGGC UG GC@LB@ :|||| |||: :|||||||:|| || ||@LB@ UACCC CUGU GUUUCUUUUCG AC CG@LB@3'-UUU...UGUUU A UC -5'@LB@ | |@LB@ 28 1@LB@@LB@@LB@Energy -15.75 kcal/mol@LB@Hybridization Energy -27.1244 kcal/mol@LB@Unfolding Energy - mRNA 8.85955 kcal/mol@LB@Unfolding Energy - sRNA 2.51867 kcal/mol@LB@@LB@Position - mRNA 263 -- 294@LB@Position - sRNA 1 -- 27@LB@Position Seed - mRNA 281 -- 287@LB@Position Seed - sRNA 7 -- 13@LB@ |
186 |
0.01333 |
0.2514 |
b0084 |
ftsI |
-11.80 |
0.135121 |
196 -- 214 |
1 -- 22 |
transpeptidase involved in septal peptidoglycan synthesis; penicillin-binding protein 3 |
|
_____________195____________________215\n_____________|______________________|\n5'-GUU...AACGC_______U__________C___GAAAA...UGG-3'\n______________GACG_CA___GAAAGCAG_GGC\n______________|||:_||___:|||||||_|||\n______________CUGU_GU___UUUUCGUC_CCG\n3'-UUU...UACCC____A__UUC________A___-5'\n_____________|_____________________|\n_____________23____________________1\n |
204 -- 210 |
5 -- 11 |
-21.3841 kcal/mol |
8.04628 kcal/mol |
1.54023 kcal/mol |
195 215@LB@ | |@LB@5'-GUU...AACGC U C GAAAA...UGG-3'@LB@ GACG CA GAAAGCAG GGC@LB@ |||: || :||||||| |||@LB@ CUGU GU UUUUCGUC CCG@LB@3'-UUU...UACCC A UUC A -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -21.3841 kcal/mol@LB@Unfolding Energy - mRNA 8.04628 kcal/mol@LB@Unfolding Energy - sRNA 1.54023 kcal/mol@LB@@LB@Position - mRNA 196 -- 214@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 5 -- 11@LB@ |
187 |
0.01374 |
0.2529 |
b1344 |
ttcA |
-15.51 |
0.020761 |
46 -- 73 |
1 -- 29 |
tRNA s(2)C32 thioltransferase iron sulfur cluster protein |
|
_____________45_____________________________74\n_____________|______________________________|\n5'-GCU...CAGCC____________G___CUGC_____A____GUAUG...UCA-3'\n______________AAAUGGGG_CAU_AAA_____GCAG_UGGU\n______________||||||||_|||_|||_____||||_|||:\n______________UUUACCCC_GUA_UUU_____CGUC_ACCG\n3'-UUU...GGUGU________U___G___CUUUU_________-5'\n_____________|_____________________________|\n_____________30____________________________1\n |
47 -- 53 |
22 -- 28 |
-26.0543 kcal/mol |
8.02666 kcal/mol |
2.51907 kcal/mol |
45 74@LB@ | |@LB@5'-GCU...CAGCC G CUGC A GUAUG...UCA-3'@LB@ AAAUGGGG CAU AAA GCAG UGGU@LB@ |||||||| ||| ||| |||| |||:@LB@ UUUACCCC GUA UUU CGUC ACCG@LB@3'-UUU...GGUGU U G CUUUU -5'@LB@ | |@LB@ 30 1@LB@@LB@@LB@Energy -15.51 kcal/mol@LB@Hybridization Energy -26.0543 kcal/mol@LB@Unfolding Energy - mRNA 8.02666 kcal/mol@LB@Unfolding Energy - sRNA 2.51907 kcal/mol@LB@@LB@Position - mRNA 46 -- 73@LB@Position - sRNA 1 -- 29@LB@Position Seed - mRNA 47 -- 53@LB@Position Seed - sRNA 22 -- 28@LB@ |
188 |
0.01388 |
0.2529 |
b4198 |
ulaF |
-10.93 |
0.193396 |
24 -- 37 |
2 -- 17 |
L-ribulose 5-phosphate 4-epimerase |
|
_____________23_______________38\n_____________|________________|\n5'-GUC...UUUGG______U_________AUUUC...GCG-3'\n______________CGAAGG___GUAGUGG\n______________|:|||:___|:|||||\n______________GUUUCU___CGUCACC\n3'-UUU...CUGUA______UUU_______G-5'\n_____________|________________|\n_____________18_______________1\n |
31 -- 37 |
2 -- 8 |
-15.3961 kcal/mol |
3.02615 kcal/mol |
1.43836 kcal/mol |
23 38@LB@ | |@LB@5'-GUC...UUUGG U AUUUC...GCG-3'@LB@ CGAAGG GUAGUGG@LB@ |:|||: |:|||||@LB@ GUUUCU CGUCACC@LB@3'-UUU...CUGUA UUU G-5'@LB@ | |@LB@ 18 1@LB@@LB@@LB@Energy -10.93 kcal/mol@LB@Hybridization Energy -15.3961 kcal/mol@LB@Unfolding Energy - mRNA 3.02615 kcal/mol@LB@Unfolding Energy - sRNA 1.43836 kcal/mol@LB@@LB@Position - mRNA 24 -- 37@LB@Position - sRNA 2 -- 17@LB@Position Seed - mRNA 31 -- 37@LB@Position Seed - sRNA 2 -- 8@LB@ |
189 |
0.01393 |
0.2529 |
b0934 |
ssuC |
-14.25 |
0.041816 |
137 -- 153 |
1 -- 17 |
aliphatic sulfonate ABC transporter permease |
|
_____________136_______________154\n_____________|_________________|\n5'-UGC...AUCCG_____C___________GAAUG...GGC-3'\n______________CAAGG_GAAGCGGUGGC\n______________|||:|_:||||:|||||\n______________GUUUC_UUUCGUCACCG\n3'-UUU...CUGUA_____U___________-5'\n_____________|________________|\n_____________18_______________1\n |
147 -- 153 |
1 -- 7 |
-24.8998 kcal/mol |
9.21593 kcal/mol |
1.43853 kcal/mol |
136 154@LB@ | |@LB@5'-UGC...AUCCG C GAAUG...GGC-3'@LB@ CAAGG GAAGCGGUGGC@LB@ |||:| :||||:|||||@LB@ GUUUC UUUCGUCACCG@LB@3'-UUU...CUGUA U -5'@LB@ | |@LB@ 18 1@LB@@LB@@LB@Energy -14.25 kcal/mol@LB@Hybridization Energy -24.8998 kcal/mol@LB@Unfolding Energy - mRNA 9.21593 kcal/mol@LB@Unfolding Energy - sRNA 1.43853 kcal/mol@LB@@LB@Position - mRNA 137 -- 153@LB@Position - sRNA 1 -- 17@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 1 -- 7@LB@ |
190 |
0.01401 |
0.2529 |
b2478 |
dapA |
-10.08 |
0.266807 |
73 -- 98 |
6 -- 25 |
dihydrodipicolinate synthase |
|
_____________72_________________________99\n_____________|__________________________|\n5'-GGC...UUUAA____UGA____UUCUU__________UAAAA...CCA-3'\n______________GGGG___GUUG_____AAGGAAAGCA\n______________||||___:|::_____|||:||||||\n______________CCCC___UAGU_____UUCUUUUCGU\n3'-UUU...UUUUA____UG____________________CACCG-5'\n_____________|__________________________|\n_____________26_________________________5\n |
92 -- 98 |
6 -- 12 |
-17.2074 kcal/mol |
6.41889 kcal/mol |
0.70636 kcal/mol |
72 99@LB@ | |@LB@5'-GGC...UUUAA UGA UUCUU UAAAA...CCA-3'@LB@ GGGG GUUG AAGGAAAGCA@LB@ |||| :|:: |||:||||||@LB@ CCCC UAGU UUCUUUUCGU@LB@3'-UUU...UUUUA UG CACCG-5'@LB@ | |@LB@ 26 5@LB@@LB@@LB@Energy -10.08 kcal/mol@LB@Hybridization Energy -17.2074 kcal/mol@LB@Unfolding Energy - mRNA 6.41889 kcal/mol@LB@Unfolding Energy - sRNA 0.70636 kcal/mol@LB@@LB@Position - mRNA 73 -- 98@LB@Position - sRNA 6 -- 25@LB@Position Seed - mRNA 92 -- 98@LB@Position Seed - sRNA 6 -- 12@LB@ |