131 |
0.01264 |
0.3104 |
b3412 |
bioH |
-11.05 |
0.080071 |
12 -- 32 |
7 -- 31 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________11________________________33\n_____________|_________________________|\n5'-GGC...GACCG______A__________________GCGGG...ACG-3'\n______________CAGGGA_GAUGG____GAGUGUGUG\n______________||||||_||||:____:|:||:|:|\n______________GUCCCU_CUACU____UUUACGCGC\n3'-UUU...CUUAA______A_____AUUG_________AGAAAG-5'\n_____________|_________________________|\n_____________32________________________6\n |
26 -- 32 |
7 -- 13 |
-25.3011 kcal/mol |
6.49654 kcal/mol |
7.75103 kcal/mol |
11 33@LB@ | |@LB@5'-GGC...GACCG A GCGGG...ACG-3'@LB@ CAGGGA GAUGG GAGUGUGUG@LB@ |||||| ||||: :|:||:|:|@LB@ GUCCCU CUACU UUUACGCGC@LB@3'-UUU...CUUAA A AUUG AGAAAG-5'@LB@ | |@LB@ 32 6@LB@@LB@@LB@Energy -11.05 kcal/mol@LB@Hybridization Energy -25.3011 kcal/mol@LB@Unfolding Energy - mRNA 6.49654 kcal/mol@LB@Unfolding Energy - sRNA 7.75103 kcal/mol@LB@@LB@Position - mRNA 12 -- 32@LB@Position - sRNA 7 -- 31@LB@Position Seed - mRNA 26 -- 32@LB@Position Seed - sRNA 7 -- 13@LB@ |
132 |
0.01286 |
0.3104 |
b3176 |
glmM |
-8.35 |
0.224806 |
246 -- 258 |
8 -- 20 |
phosphoglucosamine mutase |
|
_____________245___________259\n_____________|_____________|\n5'-GUU...GUCGU____G________CGAUC...CGG-3'\n______________GUAG_GGAUGCGC\n______________:||:_::||||||\n______________UAUU_UUUACGCG\n3'-UUU...ACUAC____G________CAGAAAG-5'\n_____________|_____________|\n_____________21____________7\n |
252 -- 258 |
8 -- 14 |
-14.3134 kcal/mol |
4.73041 kcal/mol |
1.23367 kcal/mol |
245 259@LB@ | |@LB@5'-GUU...GUCGU G CGAUC...CGG-3'@LB@ GUAG GGAUGCGC@LB@ :||: ::||||||@LB@ UAUU UUUACGCG@LB@3'-UUU...ACUAC G CAGAAAG-5'@LB@ | |@LB@ 21 7@LB@@LB@@LB@Energy -8.35 kcal/mol@LB@Hybridization Energy -14.3134 kcal/mol@LB@Unfolding Energy - mRNA 4.73041 kcal/mol@LB@Unfolding Energy - sRNA 1.23367 kcal/mol@LB@@LB@Position - mRNA 246 -- 258@LB@Position - sRNA 8 -- 20@LB@Position Seed - mRNA 252 -- 258@LB@Position Seed - sRNA 8 -- 14@LB@ |
133 |
0.01287 |
0.3104 |
b3179 |
rlmE |
-8.60 |
0.205247 |
24 -- 43 |
1 -- 17 |
23S rRNA U2552 2'-O-ribose methyltransferase SAM-dependent |
|
_____________23___________________44\n_____________|____________________|\n5'-GCC...CUUGA__________CAGAC_____AGGUG...CCC-3'\n______________GCGGAUGUGC_____CUUUC\n______________:|::|||:||_____|||||\n______________UGUUUACGCG_____GAAAG\n3'-UUU...ACUAU__________CA________-5'\n_____________|___________________|\n_____________18__________________1\n |
27 -- 33 |
8 -- 14 |
-16.3409 kcal/mol |
6.50016 kcal/mol |
1.23994 kcal/mol |
23 44@LB@ | |@LB@5'-GCC...CUUGA CAGAC AGGUG...CCC-3'@LB@ GCGGAUGUGC CUUUC@LB@ :|::|||:|| |||||@LB@ UGUUUACGCG GAAAG@LB@3'-UUU...ACUAU CA -5'@LB@ | |@LB@ 18 1@LB@@LB@@LB@Energy -8.60 kcal/mol@LB@Hybridization Energy -16.3409 kcal/mol@LB@Unfolding Energy - mRNA 6.50016 kcal/mol@LB@Unfolding Energy - sRNA 1.23994 kcal/mol@LB@@LB@Position - mRNA 24 -- 43@LB@Position - sRNA 1 -- 17@LB@Position Seed - mRNA 27 -- 33@LB@Position Seed - sRNA 8 -- 14@LB@ |
134 |
0.01294 |
0.3104 |
b2234 |
nrdA |
-13.57 |
0.028625 |
217 -- 231 |
7 -- 22 |
ribonucleoside-diphosphate reductase 1 alpha subunit |
|
_____________216______________232\n_____________|________________|\n5'-GAC...UCUGC________________ACGGU...UGC-3'\n______________UGGUGACAAA_GCGCG\n______________||:|:|||||_|||||\n______________ACUAUUGUUU_CGCGC\n3'-UUU...CUACU__________A_____AGAAAG-5'\n_____________|________________|\n_____________23_______________6\n |
220 -- 226 |
13 -- 19 |
-19.6051 kcal/mol |
4.78775 kcal/mol |
1.24379 kcal/mol |
216 232@LB@ | |@LB@5'-GAC...UCUGC ACGGU...UGC-3'@LB@ UGGUGACAAA GCGCG@LB@ ||:|:||||| |||||@LB@ ACUAUUGUUU CGCGC@LB@3'-UUU...CUACU A AGAAAG-5'@LB@ | |@LB@ 23 6@LB@@LB@@LB@Energy -13.57 kcal/mol@LB@Hybridization Energy -19.6051 kcal/mol@LB@Unfolding Energy - mRNA 4.78775 kcal/mol@LB@Unfolding Energy - sRNA 1.24379 kcal/mol@LB@@LB@Position - mRNA 217 -- 231@LB@Position - sRNA 7 -- 22@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 13 -- 19@LB@ |
135 |
0.01297 |
0.3104 |
b3409 |
feoB |
-9.25 |
0.161231 |
74 -- 82 |
5 -- 13 |
ferrous iron transporter protein B and GTP-binding protein; membrane protein |
|
_____________73________83\n_____________|_________|\n5'-CCG...AUGUG_________GCUCC...GGG-3'\n______________GUGCGCGUC\n______________:||||||||\n______________UACGCGCAG\n3'-UUU...UUGUU_________AAAG-5'\n_____________|_________|\n_____________14________4\n |
76 -- 82 |
5 -- 11 |
-15.2985 kcal/mol |
4.89519 kcal/mol |
1.15134 kcal/mol |
73 83@LB@ | |@LB@5'-CCG...AUGUG GCUCC...GGG-3'@LB@ GUGCGCGUC@LB@ :||||||||@LB@ UACGCGCAG@LB@3'-UUU...UUGUU AAAG-5'@LB@ | |@LB@ 14 4@LB@@LB@@LB@Energy -9.25 kcal/mol@LB@Hybridization Energy -15.2985 kcal/mol@LB@Unfolding Energy - mRNA 4.89519 kcal/mol@LB@Unfolding Energy - sRNA 1.15134 kcal/mol@LB@@LB@Position - mRNA 74 -- 82@LB@Position - sRNA 5 -- 13@LB@Position Seed - mRNA 76 -- 82@LB@Position Seed - sRNA 5 -- 11@LB@ |
136 |
0.01311 |
0.3104 |
b0694 |
kdpE |
-14.36 |
0.020608 |
275 -- 287 |
2 -- 14 |
response regulator in two-component regulatory system with KdpD |
|
_____________274___________288\n_____________|_____________|\n5'-ACG...GACGG_____________GAGGC...CGC-3'\n______________GAUGCGCGUCUUU\n______________:||||||||||||\n______________UUACGCGCAGAAA\n3'-UUU...AUUGU_____________G-5'\n_____________|_____________|\n_____________15____________1\n |
281 -- 287 |
2 -- 8 |
-20.3279 kcal/mol |
4.79291 kcal/mol |
1.17514 kcal/mol |
274 288@LB@ | |@LB@5'-ACG...GACGG GAGGC...CGC-3'@LB@ GAUGCGCGUCUUU@LB@ :||||||||||||@LB@ UUACGCGCAGAAA@LB@3'-UUU...AUUGU G-5'@LB@ | |@LB@ 15 1@LB@@LB@@LB@Energy -14.36 kcal/mol@LB@Hybridization Energy -20.3279 kcal/mol@LB@Unfolding Energy - mRNA 4.79291 kcal/mol@LB@Unfolding Energy - sRNA 1.17514 kcal/mol@LB@@LB@Position - mRNA 275 -- 287@LB@Position - sRNA 2 -- 14@LB@Position Seed - mRNA 281 -- 287@LB@Position Seed - sRNA 2 -- 8@LB@ |
137 |
0.01327 |
0.3104 |
b3858 |
yihD |
-10.36 |
0.105347 |
5 -- 11 |
5 -- 11 |
DUF1040 protein YihD |
|
_____________4_______12\n_____________|_______|\n_______5'-AUAA_______AGCGA...CGA-3'\n______________GCGCGUC\n______________|||||||\n______________CGCGCAG\n3'-UUU...GUUUA_______AAAG-5'\n_____________|_______|\n_____________12______4\n |
5 -- 11 |
5 -- 11 |
-14.974 kcal/mol |
3.50324 kcal/mol |
1.11145 kcal/mol |
4 12@LB@ | |@LB@ 5'-AUAA AGCGA...CGA-3'@LB@ GCGCGUC@LB@ |||||||@LB@ CGCGCAG@LB@3'-UUU...GUUUA AAAG-5'@LB@ | |@LB@ 12 4@LB@@LB@@LB@Energy -10.36 kcal/mol@LB@Hybridization Energy -14.974 kcal/mol@LB@Unfolding Energy - mRNA 3.50324 kcal/mol@LB@Unfolding Energy - sRNA 1.11145 kcal/mol@LB@@LB@Position - mRNA 5 -- 11@LB@Position - sRNA 5 -- 11@LB@Position Seed - mRNA 5 -- 11@LB@Position Seed - sRNA 5 -- 11@LB@ |
138 |
0.01331 |
0.3104 |
b2897 |
sdhE |
-11.73 |
0.060976 |
261 -- 284 |
1 -- 21 |
flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair |
|
_____________260_______________________285\n_____________|_________________________|\n5'-GUA...AACUC____UUU___UC_____________GAACA...ACA-3'\n______________GAUA___CAA__AUGC_CGUUUUUC\n______________||||___|||__||||_|||:||||\n______________CUAU___GUU__UACG_GCAGAAAG\n3'-UUU...UACUA____U___________C________-5'\n_____________|________________________|\n_____________22_______________________1\n |
278 -- 284 |
1 -- 7 |
-16.4732 kcal/mol |
3.48371 kcal/mol |
1.25763 kcal/mol |
260 285@LB@ | |@LB@5'-GUA...AACUC UUU UC GAACA...ACA-3'@LB@ GAUA CAA AUGC CGUUUUUC@LB@ |||| ||| |||| |||:||||@LB@ CUAU GUU UACG GCAGAAAG@LB@3'-UUU...UACUA U C -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -11.73 kcal/mol@LB@Hybridization Energy -16.4732 kcal/mol@LB@Unfolding Energy - mRNA 3.48371 kcal/mol@LB@Unfolding Energy - sRNA 1.25763 kcal/mol@LB@@LB@Position - mRNA 261 -- 284@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 278 -- 284@LB@Position Seed - sRNA 1 -- 7@LB@ |
139 |
0.01337 |
0.3104 |
b1255 |
yciC |
-11.25 |
0.074167 |
287 -- 299 |
1 -- 13 |
UPF0259 family inner membrane protein |
|
_____________286___________300\n_____________|_____________|\n5'-AAU...UUGCU__________A__A-3'\n______________AUGUGCGUUU_UC\n______________|||:||||:|_||\n______________UACGCGCAGA_AG\n3'-UUU...UUGUU__________A__-5'\n_____________|____________|\n_____________14___________1\n |
290 -- 296 |
4 -- 10 |
-15.0519 kcal/mol |
2.63141 kcal/mol |
1.17519 kcal/mol |
286 300@LB@ | |@LB@5'-AAU...UUGCU A A-3'@LB@ AUGUGCGUUU UC@LB@ |||:||||:| ||@LB@ UACGCGCAGA AG@LB@3'-UUU...UUGUU A -5'@LB@ | |@LB@ 14 1@LB@@LB@@LB@Energy -11.25 kcal/mol@LB@Hybridization Energy -15.0519 kcal/mol@LB@Unfolding Energy - mRNA 2.63141 kcal/mol@LB@Unfolding Energy - sRNA 1.17519 kcal/mol@LB@@LB@Position - mRNA 287 -- 299@LB@Position - sRNA 1 -- 13@LB@Position Seed - mRNA 290 -- 296@LB@Position Seed - sRNA 4 -- 10@LB@ |
140 |
0.01344 |
0.3104 |
b2388 |
glk |
-4.25 |
0.738023 |
201 -- 214 |
10 -- 20 |
glucokinase |
|
_____________200____________215\n_____________|______________|\n5'-CUA...GAAGA_______AGU____AUUAG...AUU-3'\n______________AUGACAA___AUGC\n______________||:||||___||||\n______________UAUUGUU___UACG\n3'-UUU...ACUAC______________CGCAG...AAG-5'\n_____________|______________|\n_____________21_____________9\n |
201 -- 207 |
14 -- 20 |
-8.41213 kcal/mol |
2.93934 kcal/mol |
1.22774 kcal/mol |
200 215@LB@ | |@LB@5'-CUA...GAAGA AGU AUUAG...AUU-3'@LB@ AUGACAA AUGC@LB@ ||:|||| ||||@LB@ UAUUGUU UACG@LB@3'-UUU...ACUAC CGCAG...AAG-5'@LB@ | |@LB@ 21 9@LB@@LB@@LB@Energy -4.25 kcal/mol@LB@Hybridization Energy -8.41213 kcal/mol@LB@Unfolding Energy - mRNA 2.93934 kcal/mol@LB@Unfolding Energy - sRNA 1.22774 kcal/mol@LB@@LB@Position - mRNA 201 -- 214@LB@Position - sRNA 10 -- 20@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 14 -- 20@LB@ |