b1220 |
58 |
71 |
59 |
65 |
5.88 |
CyaR |
25 |
36 |
29 |
35 |
1.42 |
-10.33 |
-17.63 |
-1.09411 |
GGUACAGCUAACGC&GCUAGCUGUACC |
((((((((((..((&)))))))))))) |
AUACGACAAAAGUUGCCAGUAAUCGUUAUUCUUUAAGGCUAUGGUUUUUCAUUAUUACCGGAAGUUACCGACGUUUUGAGCCGUUUCGUUCCUCGCAUUAUCCCGUUUUAUUUACUCUUGCUUGUAGCAGGCGGUACAGCUAACGCACAA |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0406726 |
0.9277422 |
ychO |
945801 |
putative invasin |
b1686 |
60 |
73 |
65 |
71 |
4.86 |
CyaR |
35 |
49 |
37 |
43 |
3.13 |
-15.77 |
-23.76 |
-1.67029 |
GGUGGGGUUCCUGG&CCAGGAACCACCUCC |
((.(((((((((((&))))))))).)).)) |
CUGCCGUAGCCAGGUAAAACGGGUUGAAGGCACGGGGGUACGCCAUCCUGUGCAGGCUUUACUGGAGAUUAUUAAAUGAUAUGGAAACGGAAAAUCACCCUGGAAGCACUGAAUGCUAUGGGUGAAGGAAACAUGGUGGGGUUCCUGGAU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0012872 |
0.5989771 |
menI |
946190 |
14-dihydroxy-2-naphthoyl-CoA hydrolase |
b2174 |
60 |
70 |
61 |
67 |
1.46 |
CyaR |
31 |
41 |
34 |
40 |
3.25 |
-10.95 |
-15.66 |
-1.15978 |
UUCCUGGUAUA&UGUACCAGGAA |
(((((((((((&))))))))))) |
CGCGCUGUUGAAGCUUCGUUUAGCGACUACCGCGUAAGGUUGCCUGCGUUUUUCAGUAAGAUAAUUAGAGAAAAUAUGAUUAAAAAUUUGCCGCAAAUAGUGUUGUUGAAUAUUGUCGGCCUCGCGCUGUUUCUUUCCUGGUAUAUCCCC |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0289036 |
0.9277422 |
lpxT |
946693 |
lipid A 1-diphosphate synthase undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase |
b3215 |
60 |
73 |
67 |
73 |
5.91 |
CyaR |
36 |
51 |
36 |
42 |
3.22 |
-10.88 |
-20.01 |
-1.15237 |
AGGGAUGGUUCCUG&CAGGAACCACCUCCUU |
((((((((((((((&)))))))))..))))) |
UCGCAAACAGUGCAUAACAUAUAUUAACAAUAUGUUUCUGCGUUAUUUAUCAUUAUUACAGGAGUUUUAAUUUAAAUGCUCAGACACAUUACAUUCACUGUAUUUAUAACAACAUCAAUGAAUACCUUAGCCACAGGGAUGGUUCCUGAA |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0300585 |
0.9277422 |
yhcA |
947741 |
putative periplasmic chaperone protein |
b3890 |
60 |
67 |
61 |
67 |
2.18 |
CyaR |
29 |
36 |
29 |
35 |
1.16 |
-10.64 |
-13.98 |
-1.12695 |
GGUGCAGC&GCUGUACC |
((((((((&)))))))) |
CAAGGGUACUUUUCUCUCCAUAGAUUCAAAAAUGAUAUUGGCGAGAUAUUUAUGAACUCUCUGGCAGGUAUAGAUAUGGGCAGAAUUUUACUCGAUUUAUCGAAUGAGGUGAUUAAGCAACUUGAUGAUCUCGAGGUGCAGCGUAAUCUU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0343392 |
0.9277422 |
yiiF |
948385 |
putative thymol sensitivity protein CopG family putative transcriptional regulator |
b0675 |
61 |
74 |
68 |
74 |
4.01 |
CyaR |
29 |
42 |
29 |
35 |
4.29 |
-10.45 |
-18.75 |
-1.10682 |
GUACCGGGUGCAGC&GCUGUACCAGGAAC |
((.((.((((((((&)))))))).)).)) |
UUUGCUCCAGCAUUUGCUGGAAAAUUAAUGUGCUUUUAUAGUGGCGCUUAUUGUUGUCAAUAUUCUGGGUAGUCCAUGACCAUUAAAAAUGUAAUUUGCGAUAUCGACGGCGUGCUGAUGCACGAUAACGUCGCCGUACCGGGUGCAGCG |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0381068 |
0.9277422 |
umpH |
945283 |
UMP phosphatase |
b1152 |
63 |
72 |
66 |
72 |
3.03 |
CyaR |
30 |
39 |
30 |
36 |
4.27 |
-11.44 |
-18.74 |
-1.21168 |
CCUGGUGCAG&CUGUACCAGG |
((((((((((&)))))))))) |
UUUACGCCUACAAAGUGAAAGCAUUUGGCGAAGUGGCUGAACUGCUGCCCGUCGAUCCCGGCUGUGUGGUAUAUGCGCUGGGAAGGUGUCAGCGAUGGCCUGAAGGUGACCGCCGGGAGUGUUAUUCAGCGCGAUGACCUGGUGCAGUAC |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0218742 |
0.9277422 |
jayE |
945703 |
pseudogene e14 prophagePhage or Prophage Related |
b2939 |
64 |
73 |
64 |
70 |
2.17 |
CyaR |
11 |
20 |
14 |
20 |
0.16 |
-10.76 |
-13.09 |
-1.13966 |
UAUGGGUUGU&AUAACCCAUA |
((((((((((&)))))))))) |
CUUGUAAAAACAAGAGUUUUCUCGUGGUUUCGCCGAACUUUCACACUUACGUUCGGUUAUGUGCUUAAUAAUGUUAUGAAAAAGAAACCGGUUGCGCAGUUGGAGCGUCAGCAUUCACUGCUGGAAAAUCCAUGUGCUUAUGGGUUGUUA |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.032135 |
0.9277422 |
yqgB |
947433 |
uncharacterized protein |
b1628 |
65 |
73 |
66 |
72 |
1.72 |
CyaR |
10 |
18 |
11 |
17 |
0.17 |
-11.62 |
-13.51 |
-1.23074 |
UGGGUUAUG&CAUAACCCA |
(((((((((&))))))))) |
UAAUGCCAUUGCGUUAAUUACCGCAGGUCUUAUGUCUCUGGCCUUUAUGGGCUUUAGUGGUUUGGUGAAGUUGUAAUGAAUGCUAUCUGGAUUGCCGUUGCCGCCGUGAGCCUGCUGGGCCUGGCGUUUGGCGCCAUUCUGGGUUAUGCC |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0197074 |
0.9277422 |
rsxB |
946146 |
SoxR iron-sulfur cluster reduction factor component putative iron-sulfur protein |
b0107 |
67 |
75 |
67 |
73 |
1.61 |
CyaR |
40 |
48 |
42 |
48 |
2.76 |
-10.82 |
-15.19 |
-1.14601 |
GAGGUGGUU&AACCACCUC |
(((((((((&))))))))) |
AUUCAAAGUGACAGCGCAUUGCAGCAAGCCUGCGAAGAUGUCUUCCGCUUUGAUGACGCCAACUAAGGAGCGGCAAUGAAUAUUCCACAGCUCACUGCCCUGUGUCUGCGUUAUCAUGGAGUCUUGCUGGAUGCCAGCGAAGAGGUGGUU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0310812 |
0.9277422 |
hofB |
947481 |
T2SE secretion family protein P-loop ATPase superfamily protein |