PA0007 |
-4 |
13 |
-3 |
4 |
4.07 |
PrrF1 |
104 |
120 |
113 |
119 |
2.23 |
-15.53 |
-21.83 |
-1.54868 |
AACCGUGAAACGCCUGA&UCAGGCUAAUCACGGUU |
((((((((...((((((&))))))...)))))))) |
UGUUUCCACCACAGGUGGAGCGGGCGUGACGACGGGGAGUUCCGGGGCGUCUGCCCGUUCCCAAGGACGGUAACCGUGAAACGCCUGAAAAAGACACUGCACCUUUCAAGCUUGUCCCUCGCUUCCCUGGCUCUUUCUUCCGCCGCCCUG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.001602 |
0.5837442 |
|
877575 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA4756 |
52 |
64 |
52 |
58 |
4.34 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-14.73 |
-21.3 |
-1.4689 |
AUCGUGAUUGGCC&GGCUAAUCACGGU |
(((((((((((((&))))))))))))) |
UCGGCGCCCUGUUCGUCGGCUUUGGUGUGAAGCUGGCCACCGCAACCCUGUCCUGAUUAUUGCAACGAGAGUCCCAUGCCAAAACGUACAGACAUAAAGAGCAUCCUGAUCCUCGGUGCCGGCCCCAUCGUGAUUGGCCAGGCCUGCGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0027896 |
0.6954913 |
carB |
881743 |
carbamoyl phosphate synthase large subunit |
PA2953 |
-28 |
-6 |
-28 |
-22 |
8.3 |
PrrF1 |
95 |
119 |
113 |
119 |
5.83 |
-13.48 |
-27.61 |
-1.34425 |
ACCGUGAGCCUUGAGUAGGAGAU&AUCUCCUCAUCAGGCUAAUCACGGU |
(((((((((((.((..(((((((&)))))))..))))))...))))))) |
UGCGCCCGCUCUGAUCAGGGAAAGAUCUCAGCCACCAAUAAACAGAUACCGUGAGCCUUGAGUAGGAGAUCGAUAGUGGAACGCGAAUACAUGGAAUUCGACGUCGUCAUCGUCGGCGCCGGCCCCGCCGGUCUGUCCGCCGCAUGCCGA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0063346 |
0.9377188 |
|
880159 |
electron transfer flavoprotein-ubiquinone oxidoreductase |
PA2056 |
-60 |
-44 |
-60 |
-54 |
2.64 |
PrrF1 |
106 |
119 |
113 |
119 |
2.23 |
-11.83 |
-16.7 |
-1.17971 |
AUCGUGAUAAAUAGCCU&AGGCUAAUCACGGU |
((((((((...((((((&)))))))))))))) |
GUUUCUCAUGCUGGAAUCGUGAUAAAUAGCCUCUCCGUCCUUUCACUGAUGAAAAUAAUCAUCGAUGAGAUCGCCAUGGACCUGAAUGCCGUCAAGUUGCUCGCCCGCGUGGCCGAGACCCGUAGCUUCACCCAGGCCGCCGUUUCUCUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0172911 |
0.9556607 |
|
877802 |
transcriptional regulator |
PA1336 |
43 |
53 |
43 |
49 |
2.27 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.82 |
-16.32 |
-1.17871 |
ACCGUGAAGCC&GGCUAAUCACGGU |
(((((((((((&))))..))))))) |
CUGCCGGCCGUGCCGGAAAACCGCCCGCUCCGCCGCCCAUCGUGGCGGCGGGCUGGCCUAGCCGCGACGACUGUGAUGGAAUCCCCCGACCCGCCCUGCAGCGUACCUCCGUCACUGACCGUGAAGCCCCGCCUCGUCCGCCAGUUGCUG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0173922 |
0.9556607 |
|
879303 |
two-component sensor |
PA0613 |
-3 |
19 |
-3 |
4 |
7.73 |
PrrF1 |
102 |
119 |
113 |
119 |
2.23 |
-11.69 |
-21.65 |
-1.16575 |
ACCGUGAUCAAAGCCAUCGAUG&CAUCAGGCUAAUCACGGU |
((((((((...((((...((((&)))).)))).)))))))) |
CUGCCAGGACCGCCACGAGCGCCGUUGAACCGACCUCAUGCCGAGCCCUCGCGGGCAGUGAAAGGAGACACGACCGUGAUCAAAGCCAUCGAUGAAAUGCUCAAGCUCUGGGCCGAGGAAAUGCACGCGCCAGGCAGCAACGGAGGCGGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0187568 |
0.9556607 |
|
878382 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA3504 |
-3 |
12 |
-3 |
4 |
5.91 |
PrrF1 |
105 |
119 |
113 |
119 |
2.23 |
-11.44 |
-19.58 |
-1.14082 |
ACCGUGAUUGACCUG&CAGGCUAAUCACGGU |
(((((((((..((((&))))..))))))))) |
GGCGCUGACCGUGUACAGCGUGGUCCGAGCGUUGGGCAACCACGCCCACGCGAUUUCGAUCUAGGGACGACUACCGUGAUUGACCUGAACCCGAUCCAACCCAUCUGCAUCGCCGGCGAGUGGCGAGCGGGCGGCGGCGACCUCUACGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0216584 |
0.9556607 |
|
879169 |
aldehyde dehydrogenase |
PA3745 |
58 |
73 |
58 |
64 |
1.83 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.31 |
-15.37 |
-1.12785 |
ACCGUGACCAACAGCC&GGCUAAUCACGGU |
(((((((.....((((&))))..))))))) |
GAAUAUGCGGCCUUUCGGGCCGUGGGCCCAGCGUGCAUUCAUUUUGCAAGCACCGACUACAGGAACGAAGUUCACAUGGUAACCAUCCGUCUUGCUCGUGGCGGCUCCAAAAAGCGCCCCUUCUACCACCUGACCGUGACCAACAGCCGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0233235 |
0.9556607 |
rpsP |
880510 |
30S ribosomal protein S16 |
PA1581 |
6 |
21 |
9 |
15 |
6.22 |
PrrF1 |
108 |
123 |
114 |
120 |
2.17 |
-11.38 |
-19.77 |
-1.13483 |
AAAAGCCGUGAAUAGC&GCUAAUCACGGUUUUU |
(((((((((((.((((&)))).))))))))))) |
GUCGCCACUCCCUGGUGAUGGGUACCUGACAAGUGCACUUCCCGACAACUAGCCCUGUUCGUUAGGGCUCUCAGUGUGAAAAAAGCCGUGAAUAGCAAACGACCUGUAAACCUAGACCUAAGGACCAUCAAACUCCCUGUCACCGCUUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.022413 |
0.9556607 |
sdhC |
881880 |
succinate dehydrogenase subunit C |
PA2509 |
8 |
29 |
9 |
15 |
4.78 |
PrrF1 |
104 |
121 |
114 |
120 |
2.23 |
-11.21 |
-18.22 |
-1.11788 |
AAGCCGUGAUCCAAAGCCUCGA&UCAGGCUAAUCACGGUUU |
((((((((((.....((((.((&))))))..)))))))))) |
ACCCGCUCGGUAUCGAGCGAGCCUUGAGCAGCGAACCGUCGAAAACCCGACCGCAACCCUGGUGGACCCCCGAGAAUGAGCCAAGCCGUGAUCCAAAGCCUCGAGUCGAUCAUCGUCGACCUGCCGACCAUCCGCCCGCACAAGCUGGCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0246826 |
0.9556607 |
catB |
882968 |
muconate cycloisomerase I |