PA4467 |
-12 |
3 |
-12 |
-6 |
2.76 |
PrrF1 |
102 |
118 |
112 |
118 |
2.23 |
-11.23 |
-16.22 |
-1.11987 |
CCGUGAUGCGAGAUG&CAUCAGGCUAAUCACGG |
(((((((((..((((&))))..))..))))))) |
UACAACGUGAUCGACUGGCGGGAGGUCGCGCGUCGCUAUGCGCAAGCCCUGGCCUAGUGUUACCCGUGAUGCGAGAUGGCUGGCCGGCAGCCUGGCGGUGCGGCGAUGAAGGCGUUGCUCCAUGGCAUCGCCGAAGGUAACGGGCGGACG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0244052 |
0.9556607 |
|
881012 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA0918 |
-10 |
10 |
-5 |
2 |
5.89 |
PrrF1 |
104 |
123 |
112 |
118 |
2.24 |
-11.25 |
-19.38 |
-1.12187 |
AGGAACCGUGAUGAGCUGGA&UCAGGCUAAUCACGGUUUUU |
((((((((((((..((..((&))..))..)))))))))))) |
UUCAGCGGAGCCGCCGAGAAUACCGGCCGACCCGCCGCAGAGCGGGCUCCCGAGAGCCGAAGAGAAGGAACCGUGAUGAGCUGGAAAAACACCGAAUCCCGUUAUGGGAGCCUGACCAUUGCCCUGCACUGGCUGACCCUGCUGCUGAUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0241306 |
0.9556607 |
|
878803 |
cytochrome b561 |
PA0796 |
-5 |
10 |
-5 |
2 |
4.52 |
PrrF1 |
104 |
118 |
112 |
118 |
2.23 |
-11.73 |
-18.48 |
-1.16973 |
CCGUGAUGAGCCAGA&UCAGGCUAAUCACGG |
(((((((.((((.((&)).)))).))))))) |
GCAAUAUCGAGCGCCAGCUGGAACCCCAGCCGGCGAAGCUCGCCUCCGCUUCCUCCACCGUCUAAGAGGUCCGUGAUGAGCCAGACGUCCCUUACCCCCGGCCAGCGCUUCCGCGAAGCCGUGGCCACCGAACACCCGCUGCAGGUGGUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0183269 |
0.9556607 |
prpB |
882026 |
2-methylisocitrate lyase |
PA2056 |
-60 |
-44 |
-60 |
-54 |
2.64 |
PrrF1 |
106 |
119 |
113 |
119 |
2.23 |
-11.83 |
-16.7 |
-1.17971 |
AUCGUGAUAAAUAGCCU&AGGCUAAUCACGGU |
((((((((...((((((&)))))))))))))) |
GUUUCUCAUGCUGGAAUCGUGAUAAAUAGCCUCUCCGUCCUUUCACUGAUGAAAAUAAUCAUCGAUGAGAUCGCCAUGGACCUGAAUGCCGUCAAGUUGCUCGCCCGCGUGGCCGAGACCCGUAGCUUCACCCAGGCCGCCGUUUCUCUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0172911 |
0.9556607 |
|
877802 |
transcriptional regulator |
PA3504 |
-3 |
12 |
-3 |
4 |
5.91 |
PrrF1 |
105 |
119 |
113 |
119 |
2.23 |
-11.44 |
-19.58 |
-1.14082 |
ACCGUGAUUGACCUG&CAGGCUAAUCACGGU |
(((((((((..((((&))))..))))))))) |
GGCGCUGACCGUGUACAGCGUGGUCCGAGCGUUGGGCAACCACGCCCACGCGAUUUCGAUCUAGGGACGACUACCGUGAUUGACCUGAACCCGAUCCAACCCAUCUGCAUCGCCGGCGAGUGGCGAGCGGGCGGCGGCGACCUCUACGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0216584 |
0.9556607 |
|
879169 |
aldehyde dehydrogenase |
PA0613 |
-3 |
19 |
-3 |
4 |
7.73 |
PrrF1 |
102 |
119 |
113 |
119 |
2.23 |
-11.69 |
-21.65 |
-1.16575 |
ACCGUGAUCAAAGCCAUCGAUG&CAUCAGGCUAAUCACGGU |
((((((((...((((...((((&)))).)))).)))))))) |
CUGCCAGGACCGCCACGAGCGCCGUUGAACCGACCUCAUGCCGAGCCCUCGCGGGCAGUGAAAGGAGACACGACCGUGAUCAAAGCCAUCGAUGAAAUGCUCAAGCUCUGGGCCGAGGAAAUGCACGCGCCAGGCAGCAACGGAGGCGGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0187568 |
0.9556607 |
|
878382 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA1336 |
43 |
53 |
43 |
49 |
2.27 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.82 |
-16.32 |
-1.17871 |
ACCGUGAAGCC&GGCUAAUCACGGU |
(((((((((((&))))..))))))) |
CUGCCGGCCGUGCCGGAAAACCGCCCGCUCCGCCGCCCAUCGUGGCGGCGGGCUGGCCUAGCCGCGACGACUGUGAUGGAAUCCCCCGACCCGCCCUGCAGCGUACCUCCGUCACUGACCGUGAAGCCCCGCCUCGUCCGCCAGUUGCUG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0173922 |
0.9556607 |
|
879303 |
two-component sensor |
PA3745 |
58 |
73 |
58 |
64 |
1.83 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.31 |
-15.37 |
-1.12785 |
ACCGUGACCAACAGCC&GGCUAAUCACGGU |
(((((((.....((((&))))..))))))) |
GAAUAUGCGGCCUUUCGGGCCGUGGGCCCAGCGUGCAUUCAUUUUGCAAGCACCGACUACAGGAACGAAGUUCACAUGGUAACCAUCCGUCUUGCUCGUGGCGGCUCCAAAAAGCGCCCCUUCUACCACCUGACCGUGACCAACAGCCGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0233235 |
0.9556607 |
rpsP |
880510 |
30S ribosomal protein S16 |
PA1581 |
6 |
21 |
9 |
15 |
6.22 |
PrrF1 |
108 |
123 |
114 |
120 |
2.17 |
-11.38 |
-19.77 |
-1.13483 |
AAAAGCCGUGAAUAGC&GCUAAUCACGGUUUUU |
(((((((((((.((((&)))).))))))))))) |
GUCGCCACUCCCUGGUGAUGGGUACCUGACAAGUGCACUUCCCGACAACUAGCCCUGUUCGUUAGGGCUCUCAGUGUGAAAAAAGCCGUGAAUAGCAAACGACCUGUAAACCUAGACCUAAGGACCAUCAAACUCCCUGUCACCGCUUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.022413 |
0.9556607 |
sdhC |
881880 |
succinate dehydrogenase subunit C |
PA2509 |
8 |
29 |
9 |
15 |
4.78 |
PrrF1 |
104 |
121 |
114 |
120 |
2.23 |
-11.21 |
-18.22 |
-1.11788 |
AAGCCGUGAUCCAAAGCCUCGA&UCAGGCUAAUCACGGUUU |
((((((((((.....((((.((&))))))..)))))))))) |
ACCCGCUCGGUAUCGAGCGAGCCUUGAGCAGCGAACCGUCGAAAACCCGACCGCAACCCUGGUGGACCCCCGAGAAUGAGCCAAGCCGUGAUCCAAAGCCUCGAGUCGAUCAUCGUCGACCUGCCGACCAUCCGCCCGCACAAGCUGGCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0246826 |
0.9556607 |
catB |
882968 |
muconate cycloisomerase I |