b1220 |
58 |
71 |
59 |
65 |
5.88 |
CyaR |
25 |
36 |
29 |
35 |
1.42 |
-10.33 |
-17.63 |
-1.09411 |
GGUACAGCUAACGC&GCUAGCUGUACC |
((((((((((..((&)))))))))))) |
AUACGACAAAAGUUGCCAGUAAUCGUUAUUCUUUAAGGCUAUGGUUUUUCAUUAUUACCGGAAGUUACCGACGUUUUGAGCCGUUUCGUUCCUCGCAUUAUCCCGUUUUAUUUACUCUUGCUUGUAGCAGGCGGUACAGCUAACGCACAA |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0406726 |
0.9277422 |
ychO |
945801 |
putative invasin |
b3168 |
49 |
67 |
61 |
67 |
11.55 |
CyaR |
29 |
45 |
29 |
35 |
4.3 |
-11.86 |
-27.71 |
-1.25616 |
GUGGAACGCCUGGUACAGC&GCUGUACCAGGAACCAC |
((((....(((((((((((&)))))))))))..)))) |
GCACUGAUUAUGGCUGCCCGUAAUAUUUGCUGGUUCGGUGACGAAGCGUAAUAAACUGUAGCAGGAAGGAACAGCAUGACAGAUGUAACGAUUAAAACGCUGGCCGCAGAGCGACAGACCUCCGUGGAACGCCUGGUACAGCAAUUUGCU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0171203 |
0.9277422 |
infB |
947684 |
translation initiation factor IF-2 |
b2174 |
60 |
70 |
61 |
67 |
1.46 |
CyaR |
31 |
41 |
34 |
40 |
3.25 |
-10.95 |
-15.66 |
-1.15978 |
UUCCUGGUAUA&UGUACCAGGAA |
(((((((((((&))))))))))) |
CGCGCUGUUGAAGCUUCGUUUAGCGACUACCGCGUAAGGUUGCCUGCGUUUUUCAGUAAGAUAAUUAGAGAAAAUAUGAUUAAAAAUUUGCCGCAAAUAGUGUUGUUGAAUAUUGUCGGCCUCGCGCUGUUUCUUUCCUGGUAUAUCCCC |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0289036 |
0.9277422 |
lpxT |
946693 |
lipid A 1-diphosphate synthase undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase |
b3890 |
60 |
67 |
61 |
67 |
2.18 |
CyaR |
29 |
36 |
29 |
35 |
1.16 |
-10.64 |
-13.98 |
-1.12695 |
GGUGCAGC&GCUGUACC |
((((((((&)))))))) |
CAAGGGUACUUUUCUCUCCAUAGAUUCAAAAAUGAUAUUGGCGAGAUAUUUAUGAACUCUCUGGCAGGUAUAGAUAUGGGCAGAAUUUUACUCGAUUUAUCGAAUGAGGUGAUUAAGCAACUUGAUGAUCUCGAGGUGCAGCGUAAUCUU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0343392 |
0.9277422 |
yiiF |
948385 |
putative thymol sensitivity protein CopG family putative transcriptional regulator |
b0412 |
56 |
67 |
61 |
67 |
3.66 |
CyaR |
29 |
39 |
29 |
35 |
4.29 |
-10.47 |
-18.42 |
-1.10894 |
CCUGUGUGCAGC&GCUGUACCAGG |
((((.(((((((&))))))))))) |
UGAGAUAAAGGAUCGAUGCUUUCGCUGCUUUUACCCUCUACCAUUAGGCUAAUUGCGACGAGAAAGGGACGACCUAUGAAUACUAACGUUUUUCGACUGCUCCUGCUGGGAAGCCUGUUCAGCCUUAGCGCCUGUGUGCAGCAAAGUGAA |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0376936 |
0.9277422 |
yajI |
947233 |
putative lipoprotein |
b1498 |
53 |
75 |
62 |
68 |
4.83 |
CyaR |
21 |
44 |
29 |
35 |
4.55 |
-16.06 |
-25.44 |
-1.70101 |
UGGCAUCUGGUAUGGCUGCAUUU&AAAUGCUAGCUGUACCAGGAACCA |
(((...(((((((((((((((((&)))))).)))))))))))...))) |
UAACUUCACUUACAUCCACUUAUUUCUCUUCGUAAAAUUACUUUGGAAUUAAGUACAAUAAGAAGAGGAACAUUUAUGAAGUCUGCAUUAAAGAAAAGUGUCGUAAGUACCUCGAUAUCUUUGAUACUGGCAUCUGGUAUGGCUGCAUUU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0010357 |
0.5783349 |
ydeN |
945957 |
putative Ser-type periplasmic non-aryl sulfatase |
b3861 |
52 |
70 |
64 |
70 |
5.37 |
CyaR |
31 |
49 |
31 |
37 |
3.25 |
-13.18 |
-21.8 |
-1.39597 |
GGUGGUGGCACAUGGUACA&UGUACCAGGAACCACCUCC |
((.(((((....(((((((&)))))))....))))).)) |
UGCAUCCUGCCGCUGGACAUUAUUUCAGCAUAAGUGGAUAUUCAAAGUUUUGCUGUUUUAUCAGGGAAUAUUUAUAUGAUACGUAAGUCAGCUACAGGUGUUAUUGUUGCGUUAGCCGUAAUCUGGGGUGGUGGCACAUGGUACACAGGU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.007625 |
0.9277422 |
yihF |
948352 |
DUF945 family protein |
b1873 |
45 |
70 |
64 |
70 |
9.01 |
CyaR |
11 |
49 |
11 |
17 |
4.59 |
-10.94 |
-24.54 |
-1.15872 |
GGUUGUGGUUGGUGGCGGCGGGUUAU&AUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCC |
((..((((((..((((((((((((((&)))))))...........))))..)))..))))))..)) |
UAUGCAAGCGGUUAAUUCGUUGUAUAUUUAAUUAUACAAUGAUUUCGGUGUCCAGUAAUUUAAUUAGAGGAAUCUAUGCGAGGGAAAAAACGCAUUGGGUUAUUGUUUUUGCUGAUAGCGGUUGUGGUUGGUGGCGGCGGGUUAUUGCUG |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0290661 |
0.9277422 |
torY |
946490 |
TMAO reductase III (TorYZ) cytochrome c-type subunit |
b2939 |
64 |
73 |
64 |
70 |
2.17 |
CyaR |
11 |
20 |
14 |
20 |
0.16 |
-10.76 |
-13.09 |
-1.13966 |
UAUGGGUUGU&AUAACCCAUA |
((((((((((&)))))))))) |
CUUGUAAAAACAAGAGUUUUCUCGUGGUUUCGCCGAACUUUCACACUUACGUUCGGUUAUGUGCUUAAUAAUGUUAUGAAAAAGAAACCGGUUGCGCAGUUGGAGCGUCAGCAUUCACUGCUGGAAAAUCCAUGUGCUUAUGGGUUGUUA |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.032135 |
0.9277422 |
yqgB |
947433 |
uncharacterized protein |
b1686 |
60 |
73 |
65 |
71 |
4.86 |
CyaR |
35 |
49 |
37 |
43 |
3.13 |
-15.77 |
-23.76 |
-1.67029 |
GGUGGGGUUCCUGG&CCAGGAACCACCUCC |
((.(((((((((((&))))))))).)).)) |
CUGCCGUAGCCAGGUAAAACGGGUUGAAGGCACGGGGGUACGCCAUCCUGUGCAGGCUUUACUGGAGAUUAUUAAAUGAUAUGGAAACGGAAAAUCACCCUGGAAGCACUGAAUGCUAUGGGUGAAGGAAACAUGGUGGGGUUCCUGGAU |
GCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGCUUAUUU |
0.0012872 |
0.5989771 |
menI |
946190 |
14-dihydroxy-2-naphthoyl-CoA hydrolase |