b2980 |
2 |
16 |
3 |
9 |
3.62 |
Spot42 |
18 |
33 |
26 |
32 |
4.24 |
-10.39 |
-18.25 |
-1.07092 |
UGAAAGAUGAACGUC&GAUGUUCUAUCUUUCA |
(((((((((((((((&))))))).)))))))) |
AAUCACUUACGUGAUGUGCGUGUUUUGCGAGUUAAGAACAGAAAAAUUGGUCCUACCUGUGCACGAGGUCCGGGAAUGAAAGAUGAACGUCGCCCUAUUUGCGAAGUGGUUGCAGAGAGUAUCGAACGGUUAAUUAUCGACGGCGUACUG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0121389 |
0.9238006 |
glcC |
947466 |
glycolate-inducible glc operon transcriptional repressor autorepressor |
b2619 |
67 |
75 |
69 |
75 |
3.62 |
Spot42 |
1 |
9 |
1 |
7 |
2.1 |
-8.94 |
-14.66 |
-0.921461 |
GUACCCUAC&GUAGGGUAC |
(((((((((&))))))))) |
GGGGACAAGGCUCUAUCUUAGCAUGAACCCGAUGUUACCCAGCGCCGGGAUAGCGUUUUUUUUACAGCAGGAUAAAUGAUAUUAUUUGUUGGAUUUUUGUUGAUGGAAAUUGUUAUGCCUCAGAUUAGCCGGACCGCACUGGUACCCUAC |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0275429 |
0.9238006 |
ratA |
945614 |
toxic UPF0083 family protein inhibitor of 70S ribosome formation |
b4311 |
-27 |
-16 |
-22 |
-16 |
3.92 |
Spot42 |
1 |
12 |
1 |
7 |
3.46 |
-11.59 |
-18.97 |
-1.1946 |
UCUGUAUCCUAC&GUAGGGUACAGA |
((((((((((((&)))))))))))) |
UAUUACACAACAUAAAUGCUAAUUGUUUAUGCGGGCUUUGUAUUGCUUUCUGUAUCCUACAAAUGAGUGAAAUUUAUGAAAAAGGCUAAAAUACUUUCUGGCGUAUUAUUACUGUGCUUUUCGUCCCCAUUAAUUUCUCAGGCUGCGACA |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0061225 |
0.9238006 |
nanC |
946843 |
N-acetylnuraminic acid outer membrane channel protein |
b0774 |
9 |
28 |
16 |
22 |
4.03 |
Spot42 |
4 |
24 |
12 |
18 |
7.99 |
-9.09 |
-21.11 |
-0.936922 |
GGACGAUCUUGCCUUUGACC&GGGUACAGAGGUAAGAUGUUC |
((((.((((((((((((.((&))...)))))))))))))))) |
AAAACGUGUUUUUUGUUGUUAAUUCGGUGUAGACUUGUAAACCUAAAUCUUUUCAAUUUGGUUUACAAGUCGAUUAUGACAACGGACGAUCUUGCCUUUGACCAACGCCAUAUCUGGCACCCAUACACAUCCAUGACCUCCCCUCUGCCG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0253174 |
0.9238006 |
bioA |
945376 |
78-diaminopelargonic acid synthase PLP-dependent |
b1586 |
-1 |
24 |
18 |
24 |
4.12 |
Spot42 |
5 |
28 |
5 |
11 |
8.02 |
-9.23 |
-21.37 |
-0.951352 |
GAUGAAACUCUCAACCUGCUGUGCC&GGUACAGAGGUAAGAUGUUCUAUC |
(((..((((((..((((.(((((((&))))))))))).))).)))..))) |
UCAUAGUAGCAAAUACAGUACUUUACACGUUAAAUGCUAUGCUUAAAGAAGUUAUCUUCGCGUAAGGAGCUUAUGAUGAAACUCUCAACCUGCUGUGCCGCGCUUCUGCUCGCCCUCGCCUCACCCGCGGUACUCGCCGCGCCGGGAUCC |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0234 |
0.9238006 |
ynfD |
946133 |
DUF1161 family periplasmic protein |
b3685 |
-51 |
-36 |
-49 |
-43 |
4.25 |
Spot42 |
54 |
68 |
60 |
66 |
6.15 |
-11.08 |
-21.48 |
-1.14203 |
AUUCAGCCAUAAUCCG&CGGAUUUGGCUGAAU |
(((((((((.((((((&))))))))))))))) |
CUAUAAGGCAAAUCUGCUUCACCGAUUCAGCCAUAAUCCGUAGCAAUUAAAAUGUUAUCUCAAGAGAAAUGGACGAUGAGUGAUAUAGCAUUAACGGUCAGUAUUCUGGCUUUGGUGGCAGUCGUCGGUUUGUUUAUCGGCAACGUCAAA |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0081942 |
0.9238006 |
yidE |
948193 |
putative transporter |
b3465 |
27 |
38 |
31 |
37 |
4.39 |
Spot42 |
54 |
65 |
55 |
61 |
6.13 |
-8.75 |
-19.27 |
-0.901877 |
CGGCCAAAUCCG&CGGAUUUGGCUG |
((((((((((((&)))))))))))) |
AAAUAGUCUAUCACUUAACUUAAUUCACAUCACCGCCUGCAAGUAUGUGUUAUCUGGCGGAUUGAGCAAUUUAUCAUGAAAAAACCGAAUCAUUCCGGCAGCGGCCAAAUCCGCAUUAUUGGCGGGCAGUGGCGAGGCCGUAAACUCCCG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0306386 |
0.9238006 |
rsmD |
947977 |
16S rRNA m(2)G966 methyltransferase SAM-dependent |
b1212 |
15 |
28 |
20 |
26 |
4.52 |
Spot42 |
43 |
56 |
45 |
51 |
3.25 |
-13.07 |
-20.84 |
-1.34715 |
CUGGUUACGUGAAG&CUUCACGUAAUCGG |
((((((((((((((&)))))))))))))) |
GCUGGAUAUGCUGAUUGAACCGAUUAUCCAGGAACAUCAGGCCGACCAACUGGCGGCGUUGUCCGAGCAGGAAUAAUGGAAUAUCAACACUGGUUACGUGAAGCAAUAAGCCAACUUCAGGCGAGCGAAAGCCCGCGGCGUGAUGCUGAA |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0026174 |
0.9238006 |
prmC |
945779 |
RF-1 and RF-2 N5-glutamine methyltransferase |
b3908 |
-12 |
16 |
10 |
16 |
4.66 |
Spot42 |
1 |
34 |
1 |
7 |
9.12 |
-9.96 |
-23.74 |
-1.02659 |
CUGGAGAUGAAUAUGAGCUAUACCCUGC&GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAG |
((((((((((((((...((.((((((((&)))))))).)).......)))))).))).))))) |
CAUUUAAUUAACUAUAAUGAACCAACUGCUUACGCGGCAUUAACAAUCGGCCGCCCGACAAUACUGGAGAUGAAUAUGAGCUAUACCCUGCCAUCCCUGCCGUAUGCUUACGAUGCCCUGGAACCGCACUUCGAUAAGCAGACCAUGGAA |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0154934 |
0.9238006 |
sodA |
948403 |
superoxide dismutase Mn |
b1391 |
56 |
67 |
61 |
67 |
4.67 |
Spot42 |
55 |
66 |
55 |
61 |
6.04 |
-10.65 |
-21.36 |
-1.09771 |
UCAGCCAGAUCC&GGAUUUGGCUGA |
((((((((((((&)))))))))))) |
UGGACCCAUGCUGGCAGAAAUGCAGUAUCUCCAGCGUGUCUUGCCCGGUCAGCAAUGGUAACAGAGGAGAUGGGUAUGCAACGUCUGGCCACCAUUGCACCGCCACAGGUUCAUGAGAUAUGGGCGCUACUCAGCCAGAUCCCGGACCCG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0104701 |
0.9238006 |
paaD |
945959 |
ring 12-phenylacetyl-CoA epoxidase subunit |