b3068 |
29 |
49 |
43 |
49 |
5.85 |
FnrS |
66 |
90 |
66 |
72 |
4.52 |
-11.87 |
-22.24 |
-1.20942 |
UACGGGUCGUGUUUUGCGGUA&UACUGCAUAGCACAAUUGAUUCGUA |
(((((((((((((.(((((((&))))))).)))))....)))))))) |
CGCGCCUGCUGUUUUUAUAAACAAUGUAUUUUCAAUCCGUUAUACUUUUCCUGGUGAUGUUAGAAAGGAGUAAAUAUGGUUGAGGAUAUUUUGGCUCCAGGGUUACGGGUCGUGUUUUGCGGUAUCAACCCUGGGCUUUCAUCCGCCGGG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.007222 |
0.9422174 |
mug |
947560 |
G/U mismatch-specific DNA glycosylase xanthine DNA glycosylase |
b1526 |
-16 |
3 |
-4 |
3 |
5.88 |
FnrS |
71 |
89 |
71 |
77 |
4.45 |
-10.44 |
-20.77 |
-1.06372 |
ACGAAUCGAGAAUGCUAUG&CAUAGCACAAUUGAUUCGU |
(((((((((...(((((((&)))))))...))))))))) |
GUAUGAAGAUACGCAGAUUUACUCUUGCUUUAAAAUGAAUAAUAUUAAGCCACUUAUUCACGAAUCGAGAAUGCUAUGGAUCUGACCCAACUGGAGAUGUUCAACGCGGUUGCCGAAGCUGGCAGCAUAACCCAGGCUGCAGCAAAAGUG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0193611 |
0.9422174 |
yneJ |
946079 |
putative DNA-binding transcriptional regulator |
b4648 |
-45 |
-29 |
-42 |
-36 |
6.03 |
FnrS |
60 |
76 |
67 |
73 |
3.49 |
-10.5 |
-20.02 |
-1.06983 |
GUUAUGCAGUGACUCGA&UUGAAUUACUGCAUAGC |
((((((((((((.((((&)))).)))))))))))) |
CGUAAAUGGCGCAUCGGCGGGCAGCAACAGGUUAUGCAGUGACUCGACGUUGUCGGCCUGCUCCAUGCAAUACGGUUUAAUGACGUUGGCUAUUUCCGGCAGAUUUUUCAGAAACAUACUGGUUUAACGCCAGCAGCGUGGAAGCGGCGU |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0186096 |
0.9422174 |
ysaC |
5625574 |
pseudogene |
b2650 |
-30 |
4 |
-5 |
2 |
6.55 |
FnrS |
40 |
76 |
42 |
48 |
5.75 |
-10.84 |
-23.14 |
-1.10447 |
GCCAUGUAGACAUUAAUUGAGGAAUAGACAAUGU&AUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGC |
((.((((((...((((...(((((.(((((((((&)))))))))...)))))...))))....)))))).)) |
AUGAGCGUUUUUUUAUAGUGACAAACAGUAAUAACAUUAAAAAUAGCCAUGUAGACAUUAAUUGAGGAAUAGACAAUGUUAGUUAGUAAAAGCAACGGAUUUAACGCUAGCGCAGUUUUGGGUAGUGGAAGUUAUAAUGAAAAUAAAUCU |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0148271 |
0.9422174 |
ypjC |
947640 |
pseudogene |
b4141 |
-71 |
-55 |
-61 |
-55 |
6.59 |
FnrS |
73 |
88 |
73 |
79 |
2.24 |
-10.44 |
-19.27 |
-1.06372 |
CGAAUCUGAUUGUGCUA&UAGCACAAUUGAUUCG |
((((((..(((((((((&))))))))).)))))) |
UAAGCGAAUCUGAUUGUGCUACCAUCGAAAAUCUACGCAGUUGCCCAAAAUUUGGGCGCAAUCGGACAUCAACCCAUGAGUGGACUCAAACAAGAACUGGGGCUGGCCCAGGGCAUUGGCCUGCUAUCGACGUCAUUAUUAGGCACUGGC |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0193611 |
0.9422174 |
yjeH |
948656 |
putative transporter |
b1112 |
-36 |
-15 |
-21 |
-15 |
6.62 |
FnrS |
1 |
22 |
1 |
7 |
8.09 |
-12.35 |
-27.06 |
-1.25832 |
GCUUGCGACGUCAUUCAUCUGC&GCAGGUGAAUGCAACGUCAAGC |
((((..((((((((((((((((&)))))))))))..))))))))) |
GAUCACAUCUAUCAUUUAGUUAUCGAUCGUUAAGUAAUUGCUUGCGACGUCAUUCAUCUGCAUAAGGCCACUAUUAUGAAAAACGUAAAAACCCUCAUCGCUGCGGCGAUUUUAAGCUCCAUGUCAUUUGCCAGCUUUGCGGCUGUCGAA |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0050791 |
0.9422174 |
bhsA |
945492 |
biofilm cell surface and signaling protein |
b0147 |
-41 |
-17 |
-27 |
-21 |
6.7 |
FnrS |
61 |
83 |
65 |
71 |
3.74 |
-9.99 |
-20.43 |
-1.01787 |
CACAUUGUAGCAUCGCGGUAAUUCA&UGAAUUACUGCAUAGCACAAUUG |
((.(((((.((...(((((((((((&)))))))))))...))))))))) |
ACAAAACGCUCCAGAGGGUUAACAUUCUUCGCGCCACAUUGUAGCAUCGCGGUAAUUCAUAACCGAGUGCCUCACAUGUCUGAACCGCAACGUCUGUUCUUUGCUAUCGACUUACCUGCAGAAAUCCGCGAACAGAUUAUCCAUUGGCGC |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0259293 |
0.9422174 |
ligT |
944848 |
2'-5' RNA ligase |
b4638 |
-20 |
38 |
12 |
18 |
6.85 |
FnrS |
41 |
89 |
57 |
63 |
5.87 |
-10.14 |
-22.86 |
-1.03315 |
ACGAAUUGAGUCGCUUUUAAAUGUCGCAAAAUCAAGAAAUUAGUAAGAAAGAACAAUA&UAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGU |
(((((((((...(((..........(((((.((((((((..((((((.....((((((&))))))))))))...)))))))).))..)))..)))....))))))))) |
CAGAUUUCUUAUGCUGGGCGUUCCGGCAUGACGCAUACUCUUCUGAUGCCAUAUAACGAAUUGAGUCGCUUUUAAAUGUCGCAAAAUCAAGAAAUUAGUAAGAAAGAACAAUACAACCUGAACAAGUAAGGGCAAAAAUCACAACUCUCU |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0235457 |
0.9422174 |
ttcC |
5625564 |
pseudogene prophage Rac integration site ttcA duplicationPhage or Prophage Related |
b2085 |
51 |
75 |
55 |
61 |
7.41 |
FnrS |
44 |
80 |
70 |
76 |
5.62 |
-10.85 |
-23.88 |
-1.10549 |
UUGUGCUGUGCAUAAUGAUGAGACA&UGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAA |
((((((((((((((((..(((((((&))))))).............)))).)))))))))))) |
UCAAUUAUAAUAAUCAUGCCAUUAUUAUAUUUAAACACUAGAGAGUGUCGUUGGUAUUUAAUGGGGGAAGGUGAGAUGAAAAAGAUAGCUGCUAUAUCAUUAAUUAGUAUUUUUAUUAUGUCUGGUUGUGCUGUGCAUAAUGAUGAGACA |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0147273 |
0.9422174 |
yegR |
946613 |
uncharacterized protein |
b3935 |
-3 |
27 |
5 |
11 |
7.76 |
FnrS |
4 |
34 |
21 |
27 |
15.22 |
-12.15 |
-35.13 |
-1.23794 |
GCUAUGCCCGUUGCCCACGUUGCCUUGCCC&GGUGAAUGCAACGUCAAGCGAUGGGCGUUGC |
((.(((((((((((..(((((((.((..((&))..)).)))))))...))))))))))).)) |
CGUAUGCAAACUGAUCCGCACUCUUCUACGGCAAUGUGUAUACUAACCCACCGAAUUUCAAGUCAGGAUGAUGCUAUGCCCGUUGCCCACGUUGCCUUGCCCGUUCCGCUUCCUCGUACCUUUGACUAUCUGCUGCCAGAAGGCAUGACG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0058894 |
0.9422174 |
priA |
948426 |
Primosome factor n' (replication factor Y) |