b2561 |
-7 |
16 |
-7 |
-1 |
5.14 |
Spot42 |
11 |
32 |
26 |
32 |
8.28 |
-10.17 |
-23.59 |
-1.04824 |
GAAAGAUAUGAACGGCUUACUUC&GAGGUAAGAUGUUCUAUCUUUC |
((((((((.((((..((((((((&))))))))..)))))))))))) |
GCAAUGGAAUAUAAAAUUCACUCGCGUGUGUCUCAUAUUGCCUGUUGUCGCCACUAUUUCAUCGCGAGGAAAGAUAUGAACGGCUUACUUCGUAUCCGUCAGCGUUACCAGGGGCUUGCCCAGAGUGAUAAAAAACUGGCGGAUUAUCUG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0137542 |
0.9238006 |
yfhH |
947030 |
putative DNA-binding transcriptional regulator |
b2582 |
6 |
19 |
13 |
19 |
2.49 |
Spot42 |
4 |
16 |
4 |
10 |
6.57 |
-9.03 |
-18.09 |
-0.930738 |
UACCGUUUGUACCC&GGGUACAGAGGUA |
((((.(((((((((&))))))))))))) |
CCGAUAAUAUGUAACAUAUUAGAAACAUACCGGCGUCGUUGCCGAUAAGUCUCCUUACUCAUCCCGAGGUUAGUUAUGAAUACCGUUUGUACCCAUUGUCAGGCCAUCAAUCGCAUUCCCGACGAUCGGAUCGAAGAUGCGGCAAAAUGC |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0261856 |
0.9238006 |
trxC |
947062 |
thioredoxin 2 |
b2602 |
-71 |
-60 |
-67 |
-61 |
1.23 |
Spot42 |
7 |
18 |
8 |
14 |
7.38 |
-10.62 |
-19.23 |
-1.09462 |
CUUACCUCUGUA&UACAGAGGUAAG |
((((((((((((&)))))))))))) |
AACCCUUACCUCUGUAUAGAUAAAUUUACACUCCCUUUGAAAACAAUCCGCUAUGCUUUGAAAAAGGAGAAAGAAAUGAUGAAAAAGUUUAUCGCCCCCUUGUUGGCUUUACUGGUUAGCGGAUGUCAGAUUGAUCCUUAUACUCACGCG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0106505 |
0.9238006 |
yfiL |
947106 |
lipoprotein |
b2619 |
67 |
75 |
69 |
75 |
3.62 |
Spot42 |
1 |
9 |
1 |
7 |
2.1 |
-8.94 |
-14.66 |
-0.921461 |
GUACCCUAC&GUAGGGUAC |
(((((((((&))))))))) |
GGGGACAAGGCUCUAUCUUAGCAUGAACCCGAUGUUACCCAGCGCCGGGAUAGCGUUUUUUUUACAGCAGGAUAAAUGAUAUUAUUUGUUGGAUUUUUGUUGAUGGAAAUUGUUAUGCCUCAGAUUAGCCGGACCGCACUGGUACCCUAC |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0275429 |
0.9238006 |
ratA |
945614 |
toxic UPF0083 family protein inhibitor of 70S ribosome formation |
b2622 |
62 |
69 |
62 |
68 |
1.3 |
Spot42 |
49 |
56 |
50 |
56 |
0.3 |
-9.01 |
-10.61 |
-0.928676 |
CCGAUUAC&GUAAUCGG |
((((((((&)))))))) |
ACCUUUUAGGCCCAUUGAUAGGCCCAACGAAAAGCUCUAUUGUUUACGUUGGGCCUAAACGCAGGGAGACUCCCCAUGGCAAGAAAAACCAAGCCGUUAACUGAUACGGAAAUCAAAGCCGCCAAACCUAAAGAUGCCGAUUACCAGCUU |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0264814 |
0.9238006 |
intA |
946160 |
CP4-57 prophage integrase |
b2659 |
-45 |
-24 |
-30 |
-24 |
6.31 |
Spot42 |
1 |
24 |
1 |
7 |
7.99 |
-10.83 |
-25.13 |
-1.11627 |
GAGCAUCGCCAUGUCACCCUAC&GUAGGGUACAGAGGUAAGAUGUUC |
(((((((.((.(((.(((((((&))))))))))..))...))))))) |
GUAGAUAUUUUUAGAUUAUGGCUACGAAAUGAGCAUCGCCAUGUCACCCUACAUCUCAUAAGAGGAUCGCUUCUGAUGAAUGCACUGACCGCCGUACAAAAUAACGCUGUCGAUUCAGGCCAGGACUAUAGCGGAUUCACCCUCACCCCG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0094499 |
0.9238006 |
csiD |
948076 |
carbon starvation protein |
b2715 |
-28 |
-21 |
-27 |
-21 |
0.47 |
Spot42 |
1 |
8 |
1 |
7 |
2.09 |
-9.51 |
-12.07 |
-0.980212 |
UACCCUAC&GUAGGGUA |
((((((((&)))))))) |
UUCAGCAUCGGCAUUUUUCCGUCACGUCGACUGAUAACAACUACAUCUACCCUACUGAUAACAGGAUAAAAUCCGAUGGCCAAAAAUUAUGCGGCGCUGGCACGCUCGGUGAUAGCGGCACUGGGCGGCGUUGAUAACAUCUCGGCGGUC |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0199833 |
0.9238006 |
ascF |
947154 |
cellobiose/arbutin/salicin-specific PTS enzymes IIB and IC components |
b2797 |
-68 |
-54 |
-65 |
-59 |
0.35 |
Spot42 |
55 |
69 |
60 |
66 |
6.05 |
-15.99 |
-22.39 |
-1.64812 |
UGUUCAGCUAAGUCC&GGAUUUGGCUGAAUA |
(((((((((((((((&))))))))))))))) |
UACUCUCUGUUCAGCUAAGUCCUUUCGCGCCGCUUUCGGGCGGCGCUUCCUCCGUUUUAACGCGAUGUAUUUCCUAUGAUUAGCGUAUUCGAUAUUUUCAAAAUCGGCAUUGGCCCUUCCAGUUCUCAUACCGUUGGACCAAUGAAAGCG |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.0004824 |
0.8439588 |
sdaB |
947262 |
L-serine dehydratase 2 |
b2801 |
-39 |
-29 |
-39 |
-33 |
2.87 |
Spot42 |
46 |
56 |
50 |
56 |
1.84 |
-12.84 |
-17.55 |
-1.32344 |
CCGAUUACGUG&CACGUAAUCGG |
(((((((((((&))))))))))) |
CCCGAACUCGCUGGUUUUGCACUUUUGAAAACAUAACCGAUUACGUGCUUAAGCUUCUGAACCUAAGAGGAUGCUAUGGGAAACACAUCAAUACAAACGCAGAGUUACCGUGCGGUAGAUAAAGAUGCAGGGCAAAGCAGAAGUUACAUU |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.002988 |
0.9238006 |
fucP |
947487 |
L-fucose transporter |
b2935 |
63 |
75 |
69 |
75 |
2.55 |
Spot42 |
52 |
64 |
52 |
58 |
6.13 |
-12.34 |
-21.02 |
-1.2719 |
AGCCAAAUCCGGU&AUCGGAUUUGGCU |
(((((((((((((&))))))))))))) |
UUUCCGGCGUAGCCCAAAACGCGCUGUCGUCAAGUCGUUAAGGGCGUGCCCUUCAUCAUCCGAUCUGGAGUCAAAAUGUCCUCACGUAAAGAGCUUGCCAAUGCUAUUCGUGCGCUGAGCAUGGACGCAGUACAGAAAGCCAAAUCCGGU |
GUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAUUUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA |
0.003983 |
0.9238006 |
tktA |
947420 |
transketolase 1 thiamine triphosphate-binding |