PA1283 |
25 |
36 |
28 |
34 |
5.71 |
PrrF1 |
35 |
46 |
37 |
43 |
3.67 |
-12.06 |
-21.44 |
-1.20264 |
CGUGACCAGUUG&CAACUGGUCGCG |
((((((((((((&)))))))))))) |
ACGGGAAUUGCGCGCCACGGGCGGGCGCGUGAAAAUAUAAAUACAUACGUAUGGAUUUAAACUCAAGAGGUAGCCAUGGGACGCCGACGAACGAUCGACCGUGACCAGUUGCUCGAUGCCGCCGAGGCGGUGAUCGCCCGCGAGGGCGCG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0151084 |
0.9556607 |
|
881458 |
transcriptional regulator |
PA2715 |
44 |
55 |
46 |
52 |
5.75 |
PrrF1 |
71 |
82 |
74 |
80 |
4.1 |
-16.49 |
-26.34 |
-1.64441 |
CCGACUGCGUGG&CCACGCAGUCGG |
((((((((((((&)))))))))))) |
ACAAGUACGUGCCGGCGCGCCUGGAACGGCUGGCGACGCCCGCCGCUACGAACGCCUGAGCCAGGGAGGACGAUCAUGACCUUCGUCGUGCUGGAAGAAUGCAUCCGCUGCAAACACACCGACUGCGUGGAAGUCUGUCCCGUGGACUGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.000796 |
0.5386646 |
|
882611 |
ferredoxin |
PA4236 |
-22 |
-7 |
-13 |
-7 |
5.8 |
PrrF1 |
96 |
112 |
96 |
102 |
4.92 |
-11.12 |
-21.84 |
-1.1089 |
UUAGCCGUUGAGGAGA&UCUCCUCAUCAGGCUAA |
((((((..((((((((&))))))))...)))))) |
AAUCCCUGGUCCACGCUGAUGAUUUCCGUGUAGCCGCUUCGCUUCAUAGCACGUUAGCCGUUGAGGAGAGAGUAAAUGGAAGAGAAGACCCGCCUGACCACUGCCGCUGGCGCACCGGUGGUCGAUAACCAGAACGUGCAGACCGCCGGU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0259669 |
0.9556607 |
katA |
881831 |
catalase |
PA4182 |
22 |
33 |
27 |
33 |
5.82 |
PrrF1 |
78 |
89 |
78 |
84 |
5.66 |
-11.56 |
-23.04 |
-1.15278 |
GAAGAGUCCGAC&GUCGGACUCUUC |
((((((((((((&)))))))))))) |
GACUCGCGCCUGCUGUGCGUGGCGACGGAAUCCGCCGACAGCGUAUAAGGACCCAGUCCCCGAGGAGAACAGAACAUGUACCUGCCUUCGCAUUUCGAAGAGUCCGACCCGCAGGCGCUGCACGCGCUGAUCCGGGACUAUCCGCUGGGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0202182 |
0.9556607 |
|
880293 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA0918 |
-10 |
10 |
-5 |
2 |
5.89 |
PrrF1 |
104 |
123 |
112 |
118 |
2.24 |
-11.25 |
-19.38 |
-1.12187 |
AGGAACCGUGAUGAGCUGGA&UCAGGCUAAUCACGGUUUUU |
((((((((((((..((..((&))..))..)))))))))))) |
UUCAGCGGAGCCGCCGAGAAUACCGGCCGACCCGCCGCAGAGCGGGCUCCCGAGAGCCGAAGAGAAGGAACCGUGAUGAGCUGGAAAAACACCGAAUCCCGUUAUGGGAGCCUGACCAUUGCCCUGCACUGGCUGACCCUGCUGCUGAUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0241306 |
0.9556607 |
|
878803 |
cytochrome b561 |
PA3504 |
-3 |
12 |
-3 |
4 |
5.91 |
PrrF1 |
105 |
119 |
113 |
119 |
2.23 |
-11.44 |
-19.58 |
-1.14082 |
ACCGUGAUUGACCUG&CAGGCUAAUCACGGU |
(((((((((..((((&))))..))))))))) |
GGCGCUGACCGUGUACAGCGUGGUCCGAGCGUUGGGCAACCACGCCCACGCGAUUUCGAUCUAGGGACGACUACCGUGAUUGACCUGAACCCGAUCCAACCCAUCUGCAUCGCCGGCGAGUGGCGAGCGGGCGGCGGCGACCUCUACGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0216584 |
0.9556607 |
|
879169 |
aldehyde dehydrogenase |
PA3216 |
-2 |
20 |
11 |
17 |
6.01 |
PrrF1 |
98 |
118 |
101 |
107 |
2.24 |
-11.35 |
-19.6 |
-1.13184 |
CCAUGAGCAGCCCUGAUGACGA&UCCUCAUCAGGCUAAUCACGG |
((.(((..(((.(((((((.((&)).))))))))))..))).)) |
ACUGGCCCUGUAUGUCAUCCGCGACAUCGUGCGGCCCGCACUACACUGCGCGGACACAACGAGAGGAGGCAUUCCAUGAGCAGCCCUGAUGACGAGCGUUUCCACAGUUUCGCCGAGUUCUACCCCUACUACCUGCAGGAACACAGCAAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0227992 |
0.9556607 |
|
882542 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA0353 |
-26 |
-8 |
-20 |
-14 |
6.1 |
PrrF1 |
98 |
120 |
107 |
113 |
2.24 |
-12.74 |
-21.08 |
-1.27045 |
AACCUGAUUAGCCGCAGGA&UCCUCAUCAGGCUAAUCACGGUU |
(((((((((((((..((((&)))).....))))))))).)))) |
CCCCGUUUGCAUCCGGUUCCUUCGACGCUCACGAUACAGUCAUAACCCGAACCUGAUUAGCCGCAGGAAAUCGUCAUGCCCGAUUACCGCUCGAAAACCUCCACCCACGGCCGCAACAUGGCCGGCGCCCGCGCCCUCUGGCGCGCCACC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0100432 |
0.9556607 |
ilvD |
879274 |
dihydroxy-acid dehydratase |
PA4156 |
-49 |
-33 |
-43 |
-37 |
6.16 |
PrrF1 |
99 |
117 |
104 |
110 |
2.23 |
-13.71 |
-22.1 |
-1.36718 |
CGUGAUAGCCUGAAUGG&CCUCAUCAGGCUAAUCACG |
(((((((((((((..((&))...))))))).)))))) |
UUCCCCAUUGAGGAAUGUUCUGGUGGCGUGAUAGCCUGAAUGGAAAAGAGAGUCAUUCCCAUUUGGAGAAGAUCCUUGAACGCCCGCACGCACCGCAAGCUCAACCGGGGAAUCGGCGUCGUCACGCUGUCCACCCUGCUCGCCUCGCCA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0054693 |
0.9377188 |
|
880160 |
TonB-dependent receptor |
PA1581 |
6 |
21 |
9 |
15 |
6.22 |
PrrF1 |
108 |
123 |
114 |
120 |
2.17 |
-11.38 |
-19.77 |
-1.13483 |
AAAAGCCGUGAAUAGC&GCUAAUCACGGUUUUU |
(((((((((((.((((&)))).))))))))))) |
GUCGCCACUCCCUGGUGAUGGGUACCUGACAAGUGCACUUCCCGACAACUAGCCCUGUUCGUUAGGGCUCUCAGUGUGAAAAAAGCCGUGAAUAGCAAACGACCUGUAAACCUAGACCUAAGGACCAUCAAACUCCCUGUCACCGCUUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.022413 |
0.9556607 |
sdhC |
881880 |
succinate dehydrogenase subunit C |