b4111 |
-16 |
-7 |
-14 |
-8 |
4.65 |
RyhB |
15 |
24 |
16 |
22 |
4.34 |
-11.08 |
-20.07 |
-1.16503 |
CUCUGCGAGG&CCUCGCGGAG |
((((((((((&)))))))))) |
CCCGCUCCCCUUUUGCGGCCGUCGCGCUGAUUUUUCUGGCGUUUGCGGAAAUGGGCCAACUCUGCGAGGAAAGCUAUGCUGAAAAGGAAAAAAGUAAAACCGAUUACCCUUCGUGAUGUCACCAUUAUUGAUGACGGUAAACUGCGUAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0268612 |
0.9496255 |
proP |
948626 |
proline/glycine betaine transporter |
b2264 |
43 |
51 |
44 |
50 |
0.81 |
RyhB |
52 |
60 |
53 |
59 |
2.88 |
-11.61 |
-15.3 |
-1.22076 |
CUGGAAGCA&UGCUUCCAG |
(((((((((&))))))))) |
CAUUACCGAUUCAUAUCAAUAAUCUAUUUUUGUAGCUCCUUAUACUUAGCCGCAAUAUUGAUACCGGACAAACUCAUGUCAGUAAGCGCAUUUAACCGACGCUGGGCGGCGGUCAUUCUGGAAGCAUUAACGCGUCACGGCGUCAGACAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0203264 |
0.9496255 |
menD |
946720 |
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase SEPHCHC synthase |
b4469 |
-11 |
12 |
-10 |
-4 |
5.61 |
RyhB |
38 |
60 |
53 |
59 |
3.3 |
-13.54 |
-22.45 |
-1.4237 |
CUGGAAGCAAAAUGAGCUCUAUC&GACAUUGCUCACAUUGCUUCCAG |
((((((((((...((((....((&))....))))...)))))))))) |
ACCUUUCGAUUUCUCUUUCGUUCCGGCUUAUAAUCCCCGGCCUUUGAUUAUUUUUUUAUCAUUUCUGGAAGCAAAAUGAGCUCUAUCUCCCUGAUCCAACCGGAUCGCGACCUGUUCUCCUGGCCGCAGUACUGGGCCGCCUGUUUUGGA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0070778 |
0.9291058 |
ygiQ |
948963 |
Radical SAM superfamily protein |
b3743 |
40 |
66 |
42 |
48 |
7.94 |
RyhB |
34 |
60 |
52 |
58 |
6.76 |
-19.68 |
-34.38 |
-2.0693 |
CUGGAAGCAUUAAUGGGCAAUGCGCGC&GCACGACAUUGCUCACAUUGCUUCCAG |
(((((((((....(((((((((((.((&)).)).)))))))))...))))))))) |
AGCCUAACUCACUUUUGAUUCAUUAAAAAAGAAGGCUAAAAUAGAAUGAAUCAUCAAUCCGCAUAAGAAAAUCCUAUGGAAAAUUAUCUGAUCGACAAUCUGGACCGUGGCAUCCUGGAAGCAUUAAUGGGCAAUGCGCGCACCGCUUAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0001586 |
0.1837117 |
asnC |
948259 |
transcriptional activator of asnA autorepressor |
b2525 |
55 |
73 |
56 |
62 |
6.49 |
RyhB |
40 |
60 |
53 |
59 |
3.29 |
-11.22 |
-21 |
-1.17976 |
CUGGAAGCUAAUAGCGGUG&CAUUGCUCACAUUGCUUCCAG |
((((((((....(((((((&)))))))......)))))))) |
AGGAUUUCGCCGCUCGCCGCAUGGACCAGUCGGUUCGUCGUGCGCUGAAAGGCCAUUCCGUGGACGAGGUUUAAUAUGCCAAAGAUUGUUAUUUUGCCUCAUCAGGAUCUCUGCCCUGAUGGCGCUGUUCUGGAAGCUAAUAGCGGUGAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.024966 |
0.9496255 |
fdx |
947160 |
[2Fe-2S] ferredoxin |
b1181 |
49 |
69 |
60 |
66 |
3.61 |
RyhB |
37 |
60 |
41 |
47 |
3.3 |
-16.27 |
-23.18 |
-1.71075 |
CUGGACGAAAUGAGCGAUGCG&CGACAUUGCUCACAUUGCUUCCAG |
((((((((..(((((((((((&)).)))))))))..)))..))))) |
ACUUUUUGCCGCCUGAAAGCGGCGGCAAAACUUGCAUCGCUGUGCCAGACUGGUUAUAAGGUGCGUUUUAACGUAAUGGCGGAACACCUGAUGAGCGAUGUACCUUUCUGGCAAAGUAAAACCCUGGACGAAAUGAGCGAUGCGGAAUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0014284 |
0.7090986 |
ycgN |
945804 |
UPF0153 family cysteine cluster protein |
b0943 |
-22 |
6 |
-5 |
2 |
6.9 |
RyhB |
37 |
60 |
41 |
47 |
3.3 |
-12.08 |
-22.28 |
-1.27018 |
CUGGUUUACCAGUGAAGGAGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAG |
((((.....(((((...(((((((((((&))))))))))).)))))...)))) |
CCACAAAGGCGGGAGCAACGGGCGGUAAUGCGACGGCGGUUCUCUAUUUUGAUCUGGUUUACCAGUGAAGGAGUGAUGUUGAAACGGAUAAUCUGGAUUCUGUUCUUAUUGGGAUUAACGUGGGGCUGUGAGCUAUUUGCCCAUGAUGGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0158115 |
0.9496255 |
ycbV |
945562 |
putative fimbrial-like adhesin protein |
b3311 |
-68 |
-41 |
-49 |
-43 |
11.36 |
RyhB |
37 |
60 |
39 |
45 |
3.3 |
-11.34 |
-26 |
-1.19237 |
CUGUUGAAGCAAGUGCGUCGCGAUGUCG&CGACAUUGCUCACAUUGCUUCCAG |
(((..((((((((((....(((((((((&))))))))).))).)))))))))) |
GUCUCACCUGUUGAAGCAAGUGCGUCGCGAUGUCGCACGCGUUAAGACUUUACUGAACGAGAAGGCGGGUGCGUAAUGACCGAUAAAAUCCGUACUCUGCAAGGUCGCGUUGUUAGCGACAAAAUGGAGAAAUCCAUUGUUGUUGCUAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0234421 |
0.9496255 |
rpsQ |
947808 |
30S ribosomal subunit protein S17 |
b2155 |
-55 |
-41 |
-50 |
-44 |
3.08 |
RyhB |
41 |
57 |
44 |
50 |
3.2 |
-11.36 |
-17.64 |
-1.19448 |
GAAGAUGUGAGCGAU&AUUGCUCACAUUGCUUC |
(((((((((((((((&)))))))))))..)))) |
CGUACGCAAGGGGACGUGAAGAAGAUGUGAGCGAUAACCCAUUUUAUUUUCGUAGUUACCUCAUGGAGAUAUGGAAUGUUUAGGUUGAACCCUUUCGUACGGGUCGGGCUGUGUUUGUCCGCUAUUUCUUGUGCAUGGCCUGUGUUAGCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0231967 |
0.9496255 |
cirA |
949042 |
colicin IA outer membrane receptor and translocator ferric iron-catecholate transporter |
b3365 |
-9 |
12 |
2 |
8 |
4.28 |
RyhB |
38 |
57 |
42 |
48 |
3.21 |
-10.98 |
-18.47 |
-1.15452 |
GAGGCAAAAAUGAGCAAAGUC&GACAUUGCUCACAUUGCUUC |
(((((((...(((((((..((&))..)))))))..))))))) |
AAUUUGAUUUACAUCAAUAAGCGGGGUUGCUGAAUCGUUAAGGUAGGCGGUAAUAGAAAAGAAAUCGAGGCAAAAAUGAGCAAAGUCAGACUCGCAAUUAUCGGUAACGGUAUGGUCGGCCAUCGCUUUAUCGAAGAUCUUCUUGAUAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0282964 |
0.9496255 |
nirB |
947868 |
nitrite reductase large subunit NAD(P)H-binding |