lmo1481 |
1 |
24 |
10 |
16 |
4.01 |
LhrA2 |
151 |
181 |
159 |
165 |
3.36 |
-15.05 |
-22.42 |
-1.4191 |
AUGCUGCCAGAAUGGAAACAGAUA&UAUUUGUUUUCAUUCAUCUCAUUGGCCGUGU |
((((.(((((((((((((((((((&))))))))))))))).......)))).)))) |
UGAAAUAAAACUUGCUAUCUCUUAUUUCAUGUUUUACCAUAGAAAGAGAAAUAAGAGUGAAGCGAGGCGAAAUGAAUGCUGCCAGAAUGGAAACAGAUACGCUCCAAAAAAAUAACGCCGGUGUAUUUAAUCAUCGGUACAGAAGAUUAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0149116 |
0.9011628 |
holA |
986943 |
DNA polymerase III subunit delta |
lmo0850 |
-49 |
-18 |
-35 |
-29 |
3.09 |
LhrA2 |
148 |
170 |
159 |
165 |
1.67 |
-14.84 |
-19.6 |
-1.39929 |
GAGAAAAAUAAAAAGAAUGAAAACAAAUUUUG&CAUUAUUUGUUUUCAUUCAUCUC |
((((..........((((((((((((((..((&))..)))))))))))))).)))) |
AGAGAAUAUGUUAAAGUAAGGAAAGAGAGAAAAAUAAAAAGAAUGAAAACAAAUUUUGAAGAUGGAGUGAUGAGAUUGGAUAAUAAUCAAAAAGACUUAAAUCAAGUAAUCCGUCAGCUCAAAGAAAAAGGAAUUGUCGUUGAAAAAACA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0166718 |
0.9082262 |
|
985319 |
|
lmo0292 |
3 |
49 |
39 |
45 |
1.83 |
LhrA2 |
155 |
203 |
159 |
165 |
7.05 |
-14.32 |
-23.2 |
-1.35026 |
GGACGAGAAAGAAAAGAAUUUAAAUGAAAACAGCGAGAAUGAAAGCA&UGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCC |
(((.(((..(((...(((((...(((........(((((((((((((&))))))))))).))........)))..)))))...)))....))).))) |
UUUUCAUCGUUUUUUCAUAUUUGGGGUUUAUUAUGGAAGUAUAUAAAUGCGAAAUUUGCAGAGAGGAAGGAAGACAUGGACGAGAAAGAAAAGAAUUUAAAUGAAAACAGCGAGAAUGAAAGCACGCCGAAAAGAGAGGUCGAGGAUACU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0218921 |
0.9474659 |
|
987455 |
heat-shock protein htrA serine protease |
lmo2445 |
-67 |
-36 |
-44 |
-38 |
1.3 |
LhrA2 |
157 |
177 |
159 |
165 |
1.89 |
-14.24 |
-17.43 |
-1.34272 |
GGCUAUAUUGAAAGGAGUGGAAUGAAUGAAAA&UUUUCAUUCAUCUCAUUGGCC |
(((((.........(((....(((((((((((&))))))))))))))..))))) |
GAAAGGGUGGCUAUAUUGAAAGGAGUGGAAUGAAUGAAAAAAAUAAUUGGACUGACGUUUGUUGCUAUUUGUUGAAUUUUAUUUGCACCAACAAUCAAAGCACAAGCAGAUACAGUUCCGUUACCAGCGCCUAUUAUAGAGGCUUUCCCG |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0228179 |
0.9474659 |
|
987394 |
internalin |
lmo1724 |
-57 |
12 |
3 |
9 |
11.46 |
LhrA2 |
156 |
211 |
159 |
165 |
7.92 |
-13.58 |
-32.96 |
-1.28049 |
GCAUCGGUUUAGAUGACCAAGCAGCAAUAGAAUUACUAAUAAAAAGGAGCCGCAACCAUGAAUGAAAAC&GUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGC |
(((((((....(((((....(((...((((((((((..........(((........((((((((((((&))))))))))))))).........))))))).)))...))).))))))))..)))) |
UUUUAGAAGAAGCGAAGAGCAUCGGUUUAGAUGACCAAGCAGCAAUAGAAUUACUAAUAAAAAGGAGCCGCAACCAUGAAUGAAAACCUGAUUACAAUUACGGGAUUAACGAAAAAAUAUCGAAAAAGAAAACCAUUAAAUGACAUUAAC |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0319523 |
0.9493467 |
|
986662 |
ABC transporter ATP-binding protein |
lmo0198 |
29 |
59 |
47 |
53 |
7.11 |
LhrA2 |
153 |
183 |
159 |
165 |
3.17 |
-13.57 |
-23.85 |
-1.27954 |
CUGCUGGCCAAGGCACACGGAUGAAAUCAAA&UUUGUUUUCAUUCAUCUCAUUGGCCGUGUAG |
((((.((((((.......((((((((.((((&)))).))))))))......))))))..)))) |
UGCAUUCUUGAAAAAAUGUAAAUUUUACGUUAUCAUUCAUAGUGGAUGAAUAGUGAAUAUUGGAGGUUCUAUAUAAUGUCAAAACGAUAUGCUGUAGUGCUUGCUGCUGGCCAAGGCACACGGAUGAAAUCAAAACUUUACAAAGUAUUG |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0321135 |
0.9493467 |
glmU |
987026 |
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase |
lmo1147 |
-65 |
10 |
2 |
8 |
18.88 |
LhrA2 |
158 |
211 |
160 |
166 |
7.91 |
-18.08 |
-44.87 |
-1.7048 |
GCAUUUGAGCGGGAAUUUUUAGGGGCUAAACGUAUCGGAUUGUUACGCGGAAAUGAGGAAUGGACAUGAGUGAAA&UUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGC |
((((...(((((((.......(((((((.((((...(((((...((((((.((((((........((((((((((&))))))))))))))))..))))))))))))))).)).))))).))))))))))) |
UAAUGUAACCGCAUUUGAGCGGGAAUUUUUAGGGGCUAAACGUAUCGGAUUGUUACGCGGAAAUGAGGAAUGGACAUGAGUGAAAUGAUGCUUGUAACUGGCGGGGCAAGGAGCGGUAAGAGUAGCUUUGCUGAGAGAGAAGCGGCCAAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0026867 |
0.863511 |
|
986161 |
cobalamin biosynthesis protein CopB |
lmo0922 |
-24 |
14 |
2 |
8 |
5.44 |
LhrA2 |
154 |
188 |
160 |
166 |
3.48 |
-14.95 |
-23.87 |
-1.40967 |
AUGAAUUAAAGGAUGGAACAUUGAAUGAAUGAUUACAA&UUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAU |
((((((((....((((..((.(((((((((((..((((&))))..)))))))).))).)).)))).)))))))) |
GAUUUAUGCAGCUUGCGUUAUCCUUAAAUAAAGCUGUUUACGUUUUCACGAAUGAAUUAAAGGAUGGAACAUUGAAUGAAUGAUUACAACCACUACUUUCAUUUCCCACGAGAAGAAUGGCGCAAGCUGGAAGUGAGUAAGGACCAAAUU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0157271 |
0.9011628 |
|
986345 |
pantothenate kinase |
lmo0066 |
-22 |
6 |
-3 |
4 |
8.22 |
LhrA2 |
158 |
199 |
160 |
166 |
6.89 |
-14.3 |
-29.41 |
-1.34838 |
GAGGUAUAAGGAGGCCAGAUGAAUGAAA&UUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUC |
((((((((....((((((((((((((((&)))))))))))....)))))..............)))))))) |
AAACCAUGGUUGAUGCAGACAGAGAUAUUGCUGAAAAAAUUAUCGCAGCUUUAGAGGUAUAAGGAGGCCAGAUGAAUGAAAGAAGUCAACUACCGAGAAGACGACUGGCGUGAAGCCAAAAGUGCCCUCGCUCCAUUUGCCGCAGCGAAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0221203 |
0.9474659 |
|
986392 |
toxin |
lmo1883 |
-5 |
28 |
1 |
7 |
4.58 |
LhrA2 |
139 |
173 |
161 |
167 |
3.22 |
-25.95 |
-33.75 |
-2.44688 |
AGUAGAUGAAUGGAAAACAAGUAAUGGUUGGUG&CACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUU |
((((((((((((.((((((((((((((((((((&))))..))))))))))))))))))))))))).))) |
UUUCACUAUGUUGGGUAUUUUCUAGUAGCUCCAAAAAAGUAAGUUUGGGGUAGAUAAAGUAAGGGGGAAAAGUAGAUGAAUGGAAAACAAGUAAUGGUUGGUGGUUUGUCUUUACUUUUAGUUGGUGCGGGACUGGGGGCAUUUGGCAGU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
9.7e-06 |
0.0277905 |
|
986008 |
chitinase |