PA1432 |
25 |
50 |
25 |
31 |
6.46 |
PrrF1 |
70 |
89 |
83 |
89 |
5.86 |
-14.9 |
-27.22 |
-1.48585 |
GAAGAGUUCGAUAAAAAACUGCUGGG&CCCACGCAGUCGGACUCUUC |
(((((((((((.......((((((((&)))).))))))))))))))) |
AUCUAUCUCAUUUGCUAGUUAUAAAAUUAUGAAAUUUGCAUAAAUUCUUCAGCUUCCUAUUUGGAGGAAGUGAAGAUGAUCGUACAAAUUGGUCGGCGCGAAGAGUUCGAUAAAAAACUGCUGGGCGAGAUGCACAAGUUGCGUGCUCAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0024845 |
0.6765752 |
lasI |
881777 |
acyl-homoserine-lactone synthase |
PA1464 |
28 |
51 |
45 |
51 |
8.54 |
PrrF1 |
68 |
89 |
68 |
74 |
8.02 |
-15.33 |
-31.89 |
-1.52873 |
GAAGAUCCGAUCCUGCAGUGGGUC&GACCCACGCAGUCGGACUCUUC |
((((((((((..((((.(((((((&)))))))))))))))).))))) |
GCCGUCAAGCGCCUGCACGGCGACCAUUGAUAGACAGCUUCCGCCACUUGCGGCGGUUUUCGAGAGGUUAGGGGAAUGAGCAAAGCCACCGCGCAAAGCGCCGAAGAUCCGAUCCUGCAGUGGGUCACCUUCCGCCUGGACAACGAGAGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0018445 |
0.6240997 |
|
882080 |
purine-binding chemotaxis protein |
PA1477 |
-23 |
7 |
-5 |
2 |
8.62 |
PrrF1 |
98 |
123 |
103 |
109 |
2.24 |
-12.15 |
-23.01 |
-1.21162 |
AAGAGCCCUGUAAACAGAGCCUGAUGAUGA&UCCUCAUCAGGCUAAUCACGGUUUUU |
(((((((.((.......((((((((((.((&)).))))))))))...)).))))))) |
GCCGCCCACGCUUGACCCGGGCUGGCAGCGGAAGGUCUGCCCGGUAUUUCCAAAGAGCCCUGUAAACAGAGCCUGAUGAUGAAUUGGACAUGGUUUCACAAGCUUGGGUCGCCCAAGUGGUUCUACGAGAUCAGCGGCCGCUGGCUGCCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0143251 |
0.9556607 |
ccmC |
881087 |
heme exporter protein CcmC |
PA1551 |
-15 |
5 |
-3 |
4 |
9.13 |
PrrF1 |
100 |
118 |
101 |
107 |
2.24 |
-14.25 |
-25.62 |
-1.42103 |
CCGUGGUACGCACUGAUGAG&CUCAUCAGGCUAAUCACGG |
(((((((..((.((((((((&))))))))))..))))))) |
AGUAGGCGUGCAACUAUUUUCUGACCCUGUCGGCAUGUACCGGCCGGGCGCCCCCCACUGCCGUGGUACGCACUGAUGAGCAAACAGAUUCCCGUUCAAGACGUCACCCCGCCUGCCAAGGGCGACACCAAUAACAACGAUCUCUACGCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0038469 |
0.8677507 |
|
883008 |
ferredoxin |
PA1571 |
-33 |
-7 |
-16 |
-10 |
6.81 |
PrrF1 |
96 |
121 |
99 |
105 |
5.54 |
-17.92 |
-30.27 |
-1.78701 |
AGACUGCCGAUAAACCUGAUGAGGAGA&UCUCCUCAUCAGGCUAAUCACGGUUU |
((((((..(((...(((((((((((((&)))))))))))))...))).)))))) |
CGACAUCCGCCGUUUGUCACGGCGGUUUCAUCUGCGCUCCCUAGACUGCCGAUAAACCUGAUGAGGAGACGGGCAAUGAAUUCGCAACACACCGAUACCGCCAAGCGCCGCGUGAUCCCCUUCAAUACGCAGCAGCACACCGGUGGCGCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.00026 |
0.246324 |
|
877740 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA1581 |
6 |
21 |
9 |
15 |
6.22 |
PrrF1 |
108 |
123 |
114 |
120 |
2.17 |
-11.38 |
-19.77 |
-1.13483 |
AAAAGCCGUGAAUAGC&GCUAAUCACGGUUUUU |
(((((((((((.((((&)))).))))))))))) |
GUCGCCACUCCCUGGUGAUGGGUACCUGACAAGUGCACUUCCCGACAACUAGCCCUGUUCGUUAGGGCUCUCAGUGUGAAAAAAGCCGUGAAUAGCAAACGACCUGUAAACCUAGACCUAAGGACCAUCAAACUCCCUGUCACCGCUUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.022413 |
0.9556607 |
sdhC |
881880 |
succinate dehydrogenase subunit C |
PA1602 |
-52 |
-34 |
-41 |
-35 |
4.16 |
PrrF1 |
101 |
117 |
102 |
108 |
2.22 |
-11.94 |
-18.32 |
-1.19068 |
CGGGAUAUCCGCCUGAUGA&UCAUCAGGCUAAUCACG |
((.(((....(((((((((&)))))))))..))).)) |
CGCAUGCUACCAGGCACGGCUGACGGGAUAUCCGCCUGAUGAACAGCCAUGCCCCCGGCAUGGGGAGAAACCGCCAUGAGCGAUGCCCUUGCCCUGACCGUCAACGGUCAGUCCCUGCGCCUCGAUGUCGCCCCCGAUACCCCCCUGCUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0162137 |
0.9556607 |
|
881916 |
oxidoreductase |
PA1838 |
-30 |
-7 |
-22 |
-16 |
7.27 |
PrrF1 |
98 |
121 |
105 |
111 |
2.24 |
-11.42 |
-20.93 |
-1.13882 |
AAGCCGCAUAGCCUGACAGCAGGA&UCCUCAUCAGGCUAAUCACGGUUU |
((((((..((((((((....((((&))))..))))))))....)))))) |
CCACUCCGCGUGGAGCGCGUAGCCGUGCGCGCUGGUUAACGCAGUAAGCCGCAUAGCCUGACAGCAGGAAUAUUCAUGUACGUAUACGACGAGUACGACCAACGGAUCGUCGAGGACCGCGUCAAGCAGUUCCGCGACCAGACCCGCCGU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0219074 |
0.9556607 |
cysI |
878581 |
sulfite reductase |
PA1962 |
-75 |
-63 |
-71 |
-65 |
1.36 |
PrrF1 |
106 |
117 |
108 |
114 |
2.22 |
-12.5 |
-16.08 |
-1.24652 |
CGUCGAUUGGCCU&AGGCUAAUCACG |
(((.(((((((((&)))))))))))) |
CGUCGAUUGGCCUUGCCGGUAGGAUGCAAACCACUCGAUCGCCACACUGCGAUCCCCCACUUUCAGGAGCGAGACAUGAAACUUUUGCAUAUCGAUUCCAGCAUCCUCGGCGACGCCUCCGCUUCCCGCCAACUGAGCGCCGAGCUGGUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.011619 |
0.9556607 |
azoR2 |
877936 |
FMN-dependent NADH-azoreductase |
PA2056 |
-60 |
-44 |
-60 |
-54 |
2.64 |
PrrF1 |
106 |
119 |
113 |
119 |
2.23 |
-11.83 |
-16.7 |
-1.17971 |
AUCGUGAUAAAUAGCCU&AGGCUAAUCACGGU |
((((((((...((((((&)))))))))))))) |
GUUUCUCAUGCUGGAAUCGUGAUAAAUAGCCUCUCCGUCCUUUCACUGAUGAAAAUAAUCAUCGAUGAGAUCGCCAUGGACCUGAAUGCCGUCAAGUUGCUCGCCCGCGUGGCCGAGACCCGUAGCUUCACCCAGGCCGCCGUUUCUCUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0172911 |
0.9556607 |
|
877802 |
transcriptional regulator |