b0440 |
-16 |
-8 |
-15 |
-9 |
0.56 |
ChiX |
44 |
52 |
45 |
51 |
0.86 |
-9.36 |
-10.78 |
-0.991373 |
AAAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
GGCCUGAUAUAACUGCUGCGCGUUCGUACCUUGAAGGAUUCAAGUGCGAUAUAAAUUAUAAAGAGGAAGAGAAGAGUGAAUAAAUCUCAAUUGAUCGACAAGAUUGCUGCAGGGGCUGAUAUCUCUAAAGCUGCGGCUGGCCGUGCGUUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0241376 |
0.8602904 |
hupB |
949095 |
DNA-binding protein HU-beta |
b0846 |
-14 |
-6 |
-14 |
-8 |
0.54 |
ChiX |
44 |
52 |
46 |
52 |
0.86 |
-10.43 |
-11.83 |
-1.1047 |
AGAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
UCAAAAUAAGAAGAGGGAAGACAACAUUAGCAAGGUUGUGUACAUUUGUACACAAUUGCAGAGAGAGGAAAUGACAUGCGUCGCGCUAACGAUCCGCAACGGCGAGAAAAAAUUAUCCAGGCCACGCUGGAGGCGGUGAAACUUUACGGA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0143379 |
0.8602904 |
rcdA |
945473 |
DNA-binding transcriptional regulator RcdA |
b1550 |
-12 |
-4 |
-12 |
-6 |
1.88 |
ChiX |
44 |
52 |
46 |
52 |
0.86 |
-8.87 |
-11.61 |
-0.939474 |
AAAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
AUCUUUUACACGUUUGCACCAUAUAAUCGACUUACUGUGUAACUGGAAAGUCAUAACAGACUAAAAGAGGAAAUGAUGAAUAUUGAAAACUUAAAAACAAAAGCAGAAGCAGAUAUUUCUGAAUAUAUAACAAAAAAAAUUAUUGAACUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0306951 |
0.8602904 |
gnsB |
946054 |
Qin prophage protein GnsB |
b1736 |
-15 |
-7 |
-15 |
-9 |
2.28 |
ChiX |
44 |
52 |
46 |
52 |
0.86 |
-8.33 |
-11.47 |
-0.88228 |
AGAGAGGAA&UUCCUCUUU |
(((((((((&))))))))) |
UAUCGCUAACGCCCUGAAAUUUUAAUCGAUGCCGGUACGGGUAAUCGUGCCGGUAAGAAAAGAGAGGAACGAUGUAUGAUGGAUCUCGAUAACAUUCCCGAUACGCAAACGGAAGCUGAAGAGCUGGAAGAAGUGGUGAUGGGGCUGAUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0400441 |
0.8602904 |
chbA |
946244 |
NN'-diacetylchitobiose-specific PTS enzyme IIA component |
b4047 |
-37 |
-30 |
-37 |
-31 |
0.3 |
ChiX |
45 |
52 |
46 |
52 |
0.85 |
-8.42 |
-9.57 |
-0.891812 |
AAGGAGGA&UCCUCUUU |
((((((((&)))))))) |
AGCGAUUUUUGAUAGUGACCAGAUGGCAAAAGAAUUAUAAGGAGGACACGGUACGACAAAAAAGGUAGAUGAAUCAUGUUGAAGAUAAUACCCGGUGCAACUGGAUACUUUAAUAAAACACUCAAUUCAAAUCAAUUCGAUAAUGAAGAU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.038306 |
0.8602904 |
yjbL |
948551 |
uncharacterized protein YjbL |
b1345 |
-62 |
-50 |
-57 |
-51 |
1.19 |
ChiX |
42 |
53 |
43 |
49 |
0.93 |
-10.35 |
-12.47 |
-1.09623 |
CAAACGAGGGAUU&AAUUCCUCUUUG |
((((.((((((((&)))))))))))) |
GUAAGCCAGACAGCAAACGAGGGAUUAUCUGGUACAACUAUCCAAAGAUAAAUCAGUUUAUCAAAGACUCAUGAUAUGUCUAAAUUACCAACAGGUGUCGAGAUUAGAGGUAGAUACAUUCGCAUCUGGUUCAUGUUUCGAGGAAAACGA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0149041 |
0.8602904 |
intR |
946976 |
Rac prophage putative integrase |
b3909 |
-51 |
-40 |
-47 |
-41 |
2.65 |
ChiX |
42 |
53 |
43 |
49 |
0.93 |
-9.37 |
-12.95 |
-0.992432 |
CAUUGAGGAAUU&AAUUCCUCUUUG |
((..((((((((&))))))))..)) |
UCGUUUCCAUCAACACUGAUGCUCCAUUGAGGAAUUACGCAUCAGCCCUUAAAAAUAUGCCGACAGGUGAUGGAAAUGCAGAUAAAACGCUCGAUUGAGAAAAUCCCGGGGGGGAUGAUGCUCGUCCCGCUAUUCCUUGGCGCACUGUGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0240197 |
0.8602904 |
kdgT |
948407 |
2-dehydro-3-deoxy-D-gluconate:H(+) symporter |
b0924 |
-15 |
-6 |
-12 |
-6 |
4.77 |
ChiX |
44 |
53 |
44 |
50 |
0.92 |
-8.09 |
-13.78 |
-0.85686 |
CGGAGAGGAA&UUCCUCUUUG |
((((((((((&)))))))))) |
AAUGCCGAUUGAAAAUCAUCUGCAACUCAACGAUGAAACCGAAGAGAAUCAGCCAGAUAGCGGAGAGGAAGAAUAAUGAUUGAACGCGGUAAAUUUCGCUCACUGACGCUGAUUAACUGGAACGGCUUUUUUGCCCGAACUUUUGACCUU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0450788 |
0.8602904 |
mukB |
945549 |
chromosome partitioning protein MukB |
b0549 |
-12 |
-2 |
-10 |
-4 |
1.65 |
ChiX |
43 |
53 |
45 |
51 |
0.93 |
-11.99 |
-14.57 |
-1.26993 |
CAAGGAGGAGU&AUUCCUCUUUG |
(((((((((((&))))))))))) |
AAAUACCAACACUGCUCGGAUAUACCGCCAGCUUGGUUGAUAAAAAAUGGUUGCGACUGGCAGCAAGGAGGAGUCAUGGCUGAUUUGAGAAAAGCAGCGCGUGGUCGGGAAUGCCAGGUAAGAAUCCCUGGCGUAUGUAAUGGCAACCCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0067873 |
0.8602904 |
ybcO |
945147 |
DLP12 prophage putative nuclease YbcO |
b0321 |
-18 |
-10 |
-16 |
-10 |
3.45 |
ChiX |
45 |
53 |
45 |
51 |
0.91 |
-8.26 |
-12.62 |
-0.874865 |
CAAAGGGGA&UCCUCUUUG |
(((((((((&))))))))) |
AGUGAUUCUGGCGAGCAGCAGCACCAAUACCGGAUUGCUGGCGCGUGAAUUUAUCUGCAAAGGGGAGGAAGCCUGAUGAGCCAGUCACUGUUUAGCCAACCAUUGAACGUUAUUAACGUCGGCAUCGCCAUGUUUAGCGAUGACCUGAAA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0414509 |
0.8602904 |
yahG |
945379 |
DUF1116 domain-containing protein YahG |