b0728 |
-74 |
-59 |
-66 |
-60 |
1.61 |
RyhB |
50 |
64 |
51 |
57 |
2.98 |
-10.97 |
-15.56 |
-1.15347 |
AAUGCCCGGAAGCGAU&AUUGCUUCCAGUAUU |
(((((..(((((((((&))))))))).))))) |
CAAUGCCCGGAAGCGAUACGAAAUAUUCGGUCUACGGUUUAAAAGAUAACGAUUACUGAAGGAUGGACAGAACACAUGAACUUACAUGAAUAUCAGGCAAAACAACUUUUUGCCCGCUAUGGCUUACCAGCACCGGUGGGUUAUGCCUGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0284439 |
0.9496255 |
sucC |
945312 |
succinyl-CoA synthetase beta subunit |
b0722 |
-33 |
-15 |
-32 |
-26 |
4.14 |
RyhB |
22 |
41 |
34 |
40 |
6.69 |
-14.16 |
-24.99 |
-1.48889 |
UGUCGUGCUUUCACUUCUC&GAGAACCUGAAAGCACGACA |
(((((((((((((..((((&))))...))))))))))))) |
CGAAGCGGGUAAACGCUCCGCCAAAAUCUCCUUUGUUAUUACUGUCGUGCUUUCACUUCUCGCAGGAGUCCUCGUAUGGUAAGCAACGCCUCCGCAUUAGGACGCAAUGGCGUACAUGAUUUCAUCCUCGUUCGCGCUACCGCUAUCGUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0049771 |
0.9291058 |
sdhD |
945322 |
succinate dehydrogenase membrane subunit binds cytochrome b556 |
b0896 |
51 |
69 |
52 |
58 |
3.7 |
RyhB |
36 |
54 |
47 |
53 |
3.22 |
-12.7 |
-19.62 |
-1.33537 |
GCAAUGUGUAGCAGGUGGU&ACGACAUUGCUCACAUUGC |
((((((((.((((.((.((&)).))..)))))))))))) |
UGAUCAAACCCAAUGCCAAUAGCCGCCCGACCGGGGAUACCACUGGCUAUCUGGCAAACCCGAAGGAGGUGUGAGAUGGGAAGUGGAUGGCAUGAAUGGCCGCUGAUGAUCUUCACGGUCUUCGGGCAAUGUGUAGCAGGUGGUUUUAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.011288 |
0.9496255 |
dmsC |
945502 |
dimethyl sulfoxide reductase anaerobic subunit C |
b0892 |
-18 |
15 |
1 |
7 |
10.86 |
RyhB |
37 |
66 |
43 |
49 |
3.3 |
-11.3 |
-25.46 |
-1.18817 |
GUAAGUAGAGGCACCUGAGUGAGCAAUCUGUCG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC |
((((...((((((.....(((((((((..((((&)))))))))))))..)))))).....)))) |
UGGAUGCAGCGAAAUUUACCUUCACCCCGCCGCAAGGCGUCACGGUAGAUGAUCAACGUAAGUAGAGGCACCUGAGUGAGCAAUCUGUCGCUCGAUUUUUCGGAUAAUACUUUUCAACCUCUGGCCGCGCGUAUGCGGCCAGAAAAUUUA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0239401 |
0.9496255 |
rarA |
945505 |
recombination intermediate processing DNA-dependent ATPase |
b0894 |
-38 |
-18 |
-24 |
-18 |
3.25 |
RyhB |
43 |
62 |
43 |
49 |
3.3 |
-19.93 |
-26.48 |
-2.09559 |
UACUGGAAUCAAUCGUGAGCA&UGCUCACAUUGCUUCCAGUA |
((((((((.((((.(((((((&))))))))))).)))))))) |
CGAACUGCUAUAGAAAUAAUUACACAAUACGGUUUGUUACUGGAAUCAAUCGUGAGCAAGCUUGAGUGAGCCAUUAUGAAAACGAAAAUCCCUGAUGCGGUAUUGGCUGCUGAGGUGAGUCGCCGUGGUUUGGUAAAAACGACAGCGAUC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0001337 |
0.1837117 |
dmsA |
945508 |
dimethyl sulfoxide reductase anaerobic subunit A |
b0943 |
-22 |
6 |
-5 |
2 |
6.9 |
RyhB |
37 |
60 |
41 |
47 |
3.3 |
-12.08 |
-22.28 |
-1.27018 |
CUGGUUUACCAGUGAAGGAGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAG |
((((.....(((((...(((((((((((&))))))))))).)))))...)))) |
CCACAAAGGCGGGAGCAACGGGCGGUAAUGCGACGGCGGUUCUCUAUUUUGAUCUGGUUUACCAGUGAAGGAGUGAUGUUGAAACGGAUAAUCUGGAUUCUGUUCUUAUUGGGAUUAACGUGGGGCUGUGAGCUAUUUGCCCAUGAUGGC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0158115 |
0.9496255 |
ycbV |
945562 |
putative fimbrial-like adhesin protein |
b1107 |
-41 |
18 |
-41 |
-35 |
17.57 |
RyhB |
37 |
81 |
75 |
81 |
14.89 |
-13.54 |
-46 |
-1.4237 |
CACCUGGCGGCAGCUAUUAAUAAAACAAUAAGGAGAGCAGUGUGGGUCCAGUAAUGUUG&CGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUG |
((((((((....((((.(((((.........(((.(((((((((.....((((((((((&))))))))))))))))))))))..)))))..))))..)))))))) |
CCGGCGAUCAACAAUUUAUCAGGCUGGCCGAUGACACCUGGCGGCAGCUAUUAAUAAAACAAUAAGGAGAGCAGUGUGGGUCCAGUAAUGUUGGAUGUCGAAGGUUACGAACUGGACGCGGAAGAGCGUGAAAUACUGGCGCAUCCGCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0070778 |
0.9291058 |
nagZ |
945671 |
beta N-acetyl-glucosaminidase |
b1120 |
-17 |
5 |
-7 |
-1 |
9.07 |
RyhB |
46 |
68 |
52 |
58 |
3.24 |
-14.88 |
-27.19 |
-1.5646 |
AAGUGGUGCCGGAAGCAAUGGA&UCACAUUGCUUCCAGUAUUACUU |
(((((((((.((((((((((((&)).)))))))))).))))))))) |
CGUAAAAAUAAACGCCGCCUGCGCGAGCGUUUGCGUCAGCGUAUUUUUUUCAGAGAUAAAGUGGUGCCGGAAGCAAUGGAAAAACCAAGAGUACUCGUACUGACAGGGGCAGGAAUUUCUGCGGAAUCAGGUAUUCGUACCUUUCGCGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0032796 |
0.9291058 |
cobB |
945687 |
deacetylase of acs and cheY chemotaxis regulator |
b1156 |
-15 |
4 |
-14 |
-8 |
7.28 |
RyhB |
1 |
21 |
14 |
20 |
7.15 |
-12.15 |
-26.58 |
-1.27754 |
CGUGAGGGCAGCCUGAUGC&GCGAUCAGGAAGACCCUCGCG |
((((((((...((((((((&)).))))))....)))))))) |
GGAUGGUUUAGGUGCCGCAGCCUCAGAAACGCGUCCGCGUAAUAUUGCAUUUAACUAUAUCGUGAGGGCAGCCUGAUGCAUAAAGCAAUAUUAAAUAGUGACCUUAUUGCAACAAAGGCAGGGGAUGUUACCGUUUAUAACUACGAUGGU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0152261 |
0.9496255 |
tfaE |
945723 |
e14 prophage putative tail fiber assembly protein |
b1189 |
10 |
30 |
13 |
19 |
8.06 |
RyhB |
47 |
66 |
57 |
63 |
3.09 |
-11.54 |
-22.69 |
-1.2134 |
GUCAUACUGGGAAGUGGUGUG&CACAUUGCUUCCAGUAUUAC |
((.(((((((.((((((((((&))))))))))))))))).)) |
AAUAUUUUCAACUGAGUUAUCAAGAUGUGAUUAGAUUAUUAUUCUUUUACUGUAUCUACCGUUAUCGGAGUGGCUAUGCGAGUUGUCAUACUGGGAAGUGGUGUGGUAGGCGUUGCCAGCGCCUGGUACUUAAAUCAGGCAGGACAUGAG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0210945 |
0.9496255 |
dadA |
945752 |
D-amino acid dehydrogenase |