b1943 |
-11 |
45 |
12 |
18 |
8.4 |
FnrS |
4 |
56 |
26 |
32 |
16.83 |
-12.74 |
-37.97 |
-1.29806 |
AGGAAACCUGAAUGAUUCGCUUAGCGCCCUUGAUUACCGCCGACGUUGACACCACC&GGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCU |
(((((....(((((...(((..(((((((........(((.(((((((.((.((((&))))..)))))))))..)))..))))))))))...)))....))....))))) |
ACUGCUUGCAGAAAACCGCCUCGAUCAGAAAAAGAUGGAUGAGUUCGCCCAGCGCGCCGCCAUGAGGAAACCUGAAUGAUUCGCUUAGCGCCCUUGAUUACCGCCGACGUUGACACCACCACAUUGCCUGGCGGCAAAGCCAGCGAUGCU |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.003784 |
0.9422174 |
fliK |
946449 |
flagellar hook-length control protein |
b1196 |
57 |
71 |
62 |
68 |
1.34 |
FnrS |
42 |
55 |
45 |
51 |
1.69 |
-12.72 |
-15.75 |
-1.29602 |
GGAUAGUGAGGCGGU&AUUGUCUUACUUCC |
(((.(((((((((((&)))))))))))))) |
UUCGAUAUCCGAUAAAGUCGGUUCCCGGUAACAACAACAGAAUCCUUUUUUAAUUAUUGUUUCGUUGUUUUUGGUGUGAUUCAGAAAAUAAAUAUUUUAGACAGUAGCCAGUCAGGCGUUAAAAAUGGGGCGGAUAGUGAGGCGGUUUUG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0038423 |
0.9422174 |
ycgY |
945761 |
uncharacterized protein |
b4236 |
56 |
68 |
62 |
68 |
2.71 |
FnrS |
37 |
49 |
37 |
43 |
3.22 |
-12.7 |
-18.63 |
-1.29398 |
AAGACAAUAUGGA&UCCAUAUUGUCUU |
(((((((((((((&))))))))))))) |
GUACGUGACCCGGUCGAAUGAGCGUAGUCGUCGAUGAGGCAGUGUGAAGGAUGAAGUGUAAAUAAAAAAGGAACUAUUCUUGCAGUCUCCUCGUUGGUAUUCAGUUCGGCGUCAUUUGCUGCUGAUCUCGAAGACAAUAUGGAAACCCUC |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0039014 |
0.9422174 |
cybC |
948758 |
pseudogene truncated cytochrome b562 cytochrome b(562) |
b4040 |
-14 |
8 |
-14 |
-8 |
0.97 |
FnrS |
34 |
59 |
53 |
59 |
7.46 |
-12.6 |
-21.03 |
-1.28379 |
AAGAGGAAAAAAAUAUGGAGUG&CGCUCCAUAUUGUCUUACUUCCUUUU |
((((((((...(((((((((((&))))))))))).......)))))))) |
CGAUUAAGCGGUAAACCGCUGUUGCUAACAGAACUGUUUUUACCGGCGUCACCGUUGUACUAAGAGGAAAAAAAUAUGGAGUGGAGUCUGACGCAGAAUAAGCUGCUGGCGUUUCAUCGCUUAAUGCGUACGGAUAAGCCAAUUGGCGCG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0042095 |
0.9422174 |
ubiA |
948540 |
p-hydroxybenzoate octaprenyltransferase |
b2777 |
-4 |
8 |
-3 |
4 |
3.62 |
FnrS |
66 |
77 |
70 |
76 |
2.87 |
-12.41 |
-18.9 |
-1.26444 |
UGCUAUGCAGUA&UACUGCAUAGCA |
((((((((((((&)))))))))))) |
CAGAAUGUUAAUAAGACAUGAUUGUUGUGGCAGGAUCUGCAAUAAUUAACAAUUAUCCACUUCACAGAGAAUGCUAUGCAGUACCCGAUUAACGAGAUGUUCCAGACCCUGCAAGGUGAGGGUUACUUUACCGGCGUUCCCGCCAUUUUU |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0048567 |
0.9422174 |
queE |
947527 |
7-carboxy-7-deazaguanine synthase queosine biosynthesis |
b1112 |
-36 |
-15 |
-21 |
-15 |
6.62 |
FnrS |
1 |
22 |
1 |
7 |
8.09 |
-12.35 |
-27.06 |
-1.25832 |
GCUUGCGACGUCAUUCAUCUGC&GCAGGUGAAUGCAACGUCAAGC |
((((..((((((((((((((((&)))))))))))..))))))))) |
GAUCACAUCUAUCAUUUAGUUAUCGAUCGUUAAGUAAUUGCUUGCGACGUCAUUCAUCUGCAUAAGGCCACUAUUAUGAAAAACGUAAAAACCCUCAUCGCUGCGGCGAUUUUAAGCUCCAUGUCAUUUGCCAGCUUUGCGGCUGUCGAA |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0050791 |
0.9422174 |
bhsA |
945492 |
biofilm cell surface and signaling protein |
b0699 |
-18 |
5 |
-3 |
4 |
4.22 |
FnrS |
37 |
62 |
38 |
44 |
5.23 |
-12.33 |
-21.78 |
-1.25628 |
CAAAAGGGGGAGAAAAGUAUGGA&UCCAUAUUGUCUUACUUCCUUUUUUG |
((((((((((((...((((((((&))))))))......)))))))))))) |
UACUAUUUUCAUCAGAUAAACAAAUUCAUUUUUCCGGUGCCAUUCACCGGGUAGAUACAAAAGGGGGAGAAAAGUAUGGAACUCUACAGAGAAUAUCCUGCAUGGCUUAUCUUUUUACGCCGUACUUAUGCGGUUGCAGCGGGCGUUCUG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0051553 |
0.9422174 |
ybfA |
947452 |
DUF2517 family protein |
b3935 |
-3 |
27 |
5 |
11 |
7.76 |
FnrS |
4 |
34 |
21 |
27 |
15.22 |
-12.15 |
-35.13 |
-1.23794 |
GCUAUGCCCGUUGCCCACGUUGCCUUGCCC&GGUGAAUGCAACGUCAAGCGAUGGGCGUUGC |
((.(((((((((((..(((((((.((..((&))..)).)))))))...))))))))))).)) |
CGUAUGCAAACUGAUCCGCACUCUUCUACGGCAAUGUGUAUACUAACCCACCGAAUUUCAAGUCAGGAUGAUGCUAUGCCCGUUGCCCACGUUGCCUUGCCCGUUCCGCUUCCUCGUACCUUUGACUAUCUGCUGCCAGAAGGCAUGACG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0058894 |
0.9422174 |
priA |
948426 |
Primosome factor n' (replication factor Y) |
b1813 |
-10 |
28 |
-7 |
-1 |
10.73 |
FnrS |
15 |
54 |
45 |
51 |
13.74 |
-12.15 |
-36.62 |
-1.23794 |
GAAGUAAGACGUGGAAUACCGUAGCCUGACGCUUGAUG&CGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUC |
((((((((((.((((....(((((((...(((((((((&)))))))))...)))..)))).))))....)))))))))) |
AGCCAGGAAGAAGCGGAAUAUCAGGAAACUUUUGAUAAAGUUAAUCGUAUCCUGAAGCAACUGGAGAAGUAAGACGUGGAAUACCGUAGCCUGACGCUUGAUGAUUUUUUAUCGCGCUUUCAACUUUUGCGCCCGCAAAUUAACCGGGAA |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0058894 |
0.9422174 |
nudL |
946330 |
putative CoA pyrophosphohydrolase weak 3-phosphohydroxypyruvate phosphatase |
b2513 |
-21 |
5 |
-18 |
-12 |
4.32 |
FnrS |
37 |
63 |
54 |
60 |
5.31 |
-12.12 |
-21.75 |
-1.23489 |
UUAAGGAAGGAGAAGGACAGCGUGGA&UCCAUAUUGUCUUACUUCCUUUUUUGA |
((((((((((((.((((((...((((&))))...)))))).)).)))))))))) |
GCAAACGGCAGUUGCGCAGGAUAGCGUAGCCGCGCAUUUGCGCACGUUACUGGGUUAAGGAAGGAGAAGGACAGCGUGGAAAUUUACGAGAACGAAAACGACCAGGUAGAAGCGGUUAAACGCUUUUUUGCUGAAAAUGGCAAAGCACUG |
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAAUUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUUUUUU |
0.0060206 |
0.9422174 |
yfgM |
946981 |
ancillary SecYEG translocon subunit putative anti-RcsB factor |