Freiburg RNA Tools
INFORNA - Sequence Design
BIF
IFF
INFORNA

INFORNA - Sequence Design

INFO-RNA is a server for the design of RNA sequences that fold into a given pseudo-knot free RNA secondary structure. Here, you can get an example of the settings and the results. Some hints how to handle structures including small pseudo-knots can be found in the Help page.

Note: SECISDesign is not maintained anymore.
The source code is available at http://www.bioinf.uni-freiburg.de/Software/

For articles describing the tool refer to the reference section below. Please cite us when using our tools.
For more information check the help page.

Try INFORNA with this example: Hairpin loop (input|result) ?

Constraints

?
?
Constraint Overview
?

Parameters for the Stochastic Local Search

?
?
?


?

? Description:
? Your Email:
(optional)
(optional)

When using INFORNA please cite :

Results are computed with INFORNA version 2.2.0 linking Vienna RNA package 1.8.4