Freiburg RNA Tools
CRISPRmap - CRISPR Conservation
BIF
IFF
CRISPRmap

CRISPRmap - CRISPR Conservation

CRISPRmap provides a quick and detailed insight into repeat conservation and diversity of both bacterial and archaeal systems. It comprises the largest dataset of CRISPRs to date and enables comprehensive independent clustering analyses to determine conserved sequence families, potential structure motifs for endoribonucleases, and evolutionary relationships.

For articles describing the tool refer to the reference section below. Please cite us when using our tools.
For more information check the help page.

Try CRISPRmap with these examples:
(2018-10-26) Please note: We are currently observing difficulties with the iTOL webserver that is used to generate the central CRISPRmap result graphics.

We are working on the issue in concert with the iTOL maintainers and hope to get the CRISPRmap service fully functional within the next days.

Thanks for your patience, the Freiburg RNA tools team.

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When using CRISPRmap please cite :

Results are computed with CRISPRmap version meta