Freiburg RNA Tools
CRISPRloci - CRISPR-Cas annotation
BIF
IFF
CRISPRloci

CRISPRloci - CRISPR-Cas annotation

CRISPRloci provides an automated and comprehensive in silico characterization of CRISPR-Cas system on bacterial and archaeal genomes. It is a full suite for CRISPR locus characteriztion that includes CRISPR array orientation, detection of conserved leaders, cas gene annotation and subtype classification.

For articles describing the tool and webserver refer to the reference section below. Please cite us when using our tools.
For more information check the help page.

Try CRISPRloci with these examples:

Note: the CRISPRloci webserver will be offline for maintenance from 02/12/2021 to 15/01/2022.

Due to an upcoming hardware replacement and restructuring, we have to temporarily stop the Freiburg RNA tools service. We will restart the service as soon as possible, hopefully before the announced date.

We apologize for the inconvenience.

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When using CRISPRloci please cite :

Results are computed with CRISPRloci version 1.1.0