105 |
0.005236 |
0.1728 |
stm4566 |
yjjI |
-12.28 |
0.305832 |
96 -- 137 |
40 -- 77 |
YjjI family glycine radical enzyme |
|
_____________95________________138\n_____________|_________________|\n5'-ACA...UUUUC____________U____CCGGC...UGG-3'\n______________UACAAUAGCGCA_CGUC\n______________:||||:|:|:||_|:||\n______________GUGUUGUUGUGU_GUAG\n3'-UUU...CGUUU____________U____UGUUG...UCA-5'\n_____________|_________________|\n_____________78________________39\n |
167 -- 173 |
74 -- 80 |
-18.3997 kcal/mol |
3.44142 kcal/mol |
3.92987 kcal/mol |
95 138@LB@ | |@LB@5'-ACA...UUUUC U CCGGC...UGG-3'@LB@ UACAAUAGCGCA CGUC@LB@ :||||:|:|:|| |:||@LB@ GUGUUGUUGUGU GUAG@LB@3'-UUU...CGUUU U UGUUG...UCA-5'@LB@ | |@LB@ 78 39@LB@@LB@@LB@Energy -12.28 kcal/mol@LB@Hybridization Energy -18.3997 kcal/mol@LB@Unfolding Energy - mRNA 3.44142 kcal/mol@LB@Unfolding Energy - sRNA 3.92987 kcal/mol@LB@@LB@Position - mRNA 96 -- 137@LB@Position - sRNA 40 -- 77@LB@Position Seed - mRNA 167 -- 173@LB@Position Seed - sRNA 74 -- 80@LB@ |
70 |
0.003306 |
0.1596 |
stm2688 |
smpB |
-12.25 |
0.308628 |
191 -- 230 |
36 -- 77 |
SsrA-binding protein |
|
_____________190_________________231\n_____________|___________________|\n5'-AAU...GCAUA____UUCC__U________AUCGU...GUC-3'\n______________GCAA____CA_CAACAUAA\n______________||||____||_|||||:||\n______________CGUU____GU_GUUGUGUU\n3'-UUU...GUUAA____UGU___U________GUAGU...UCA-5'\n_____________|___________________|\n_____________78__________________35\n |
26 -- 32 |
73 -- 79 |
-12.551 kcal/mol |
1.44298 kcal/mol |
3.77104 kcal/mol |
190 231@LB@ | |@LB@5'-AAU...GCAUA UUCC U AUCGU...GUC-3'@LB@ GCAA CA CAACAUAA@LB@ |||| || |||||:||@LB@ CGUU GU GUUGUGUU@LB@3'-UUU...GUUAA UGU U GUAGU...UCA-5'@LB@ | |@LB@ 78 35@LB@@LB@@LB@Energy -12.25 kcal/mol@LB@Hybridization Energy -12.551 kcal/mol@LB@Unfolding Energy - mRNA 1.44298 kcal/mol@LB@Unfolding Energy - sRNA 3.77104 kcal/mol@LB@@LB@Position - mRNA 191 -- 230@LB@Position - sRNA 36 -- 77@LB@Position Seed - mRNA 26 -- 32@LB@Position Seed - sRNA 73 -- 79@LB@ |
38 |
0.001379 |
0.1215 |
stm0150 |
aroP |
-12.21 |
0.313123 |
213 -- 232 |
63 -- 83 |
APC family aromatic amino acid transporter |
|
_____________212_________________________233\n_____________|___________________________|\n5'-CAU...UGAUG____GU_____________A_______CAAGC...UGU-3'\n______________GACA__CAGCAGCACGGCG__GCAGCU\n______________:|||__||:||:|||::|:__:||:|:\n______________UUGU__GUUGUUGUGUUGU__UGUUGG\n3'-UUU...AACGU___________________AG______CAUUC...UCA-5'\n_____________|___________________________|\n_____________84__________________________62\n |
219 -- 225 |
71 -- 77 |
-26.8853 kcal/mol |
7.73214 kcal/mol |
8.28637 kcal/mol |
212 233@LB@ | |@LB@5'-CAU...UGAUG GU A CAAGC...UGU-3'@LB@ GACA CAGCAGCACGGCG GCAGCU@LB@ :||| ||:||:|||::|: :||:|:@LB@ UUGU GUUGUUGUGUUGU UGUUGG@LB@3'-UUU...AACGU AG CAUUC...UCA-5'@LB@ | |@LB@ 84 62@LB@@LB@@LB@Energy -12.21 kcal/mol@LB@Hybridization Energy -26.8853 kcal/mol@LB@Unfolding Energy - mRNA 7.73214 kcal/mol@LB@Unfolding Energy - sRNA 8.28637 kcal/mol@LB@@LB@Position - mRNA 213 -- 232@LB@Position - sRNA 63 -- 83@LB@Position Seed - mRNA 219 -- 225@LB@Position Seed - sRNA 71 -- 77@LB@ |
181 |
0.01001 |
0.1966 |
stm2266 |
apbE |
-12.19 |
0.314808 |
267 -- 297 |
62 -- 90 |
FAD:protein FMN transferase ApbE |
|
_____________266_____________________________298\n_____________|_______________________________|\n5'-ACC...AUGAG__UCCCGA______A__________CU____CUC-3'\n______________GC______AACGAC_ACAGCGUCAC__GCCG\n______________||______|||:||_|||:|:||||__:|||\n______________CG______UUGUUG_UGUUGUAGUG__UGGC\n3'-UUU...GUUAA__UUUGUG_________________U_____AUUCG...UCA-5'\n_____________|_______________________________|\n_____________91______________________________61\n |
285 -- 291 |
67 -- 73 |
-27.9543 kcal/mol |
7.52451 kcal/mol |
8.62576 kcal/mol |
266 298@LB@ | |@LB@5'-ACC...AUGAG UCCCGA A CU CUC-3'@LB@ GC AACGAC ACAGCGUCAC GCCG@LB@ || |||:|| |||:|:|||| :|||@LB@ CG UUGUUG UGUUGUAGUG UGGC@LB@3'-UUU...GUUAA UUUGUG U AUUCG...UCA-5'@LB@ | |@LB@ 91 61@LB@@LB@@LB@Energy -12.19 kcal/mol@LB@Hybridization Energy -27.9543 kcal/mol@LB@Unfolding Energy - mRNA 7.52451 kcal/mol@LB@Unfolding Energy - sRNA 8.62576 kcal/mol@LB@@LB@Position - mRNA 267 -- 297@LB@Position - sRNA 62 -- 90@LB@Position Seed - mRNA 285 -- 291@LB@Position Seed - sRNA 67 -- 73@LB@ |
142 |
0.007269 |
0.182 |
stm4341 |
frdC |
-12.15 |
0.319206 |
131 -- 234 |
54 -- 160 |
fumarate reductase subunit C |
|
_____________130__________________235\n_____________|____________________|\n5'-AGA...AGGAG_______________UA___GCAAA...CGG-3'\n______________UGC_AACAUGACGAC__AAC\n______________|||_||||::||:||__|||\n______________ACG_UUGUGUUGUUG__UUG\n3'-UUU...GGUUA___U___________UG___UAGUG...UCA-5'\n_____________|____________________|\n_____________161__________________53\n |
202 -- 208 |
77 -- 83 |
-18.8897 kcal/mol |
4.02107 kcal/mol |
3.80548 kcal/mol |
130 235@LB@ | |@LB@5'-AGA...AGGAG UA GCAAA...CGG-3'@LB@ UGC AACAUGACGAC AAC@LB@ ||| ||||::||:|| |||@LB@ ACG UUGUGUUGUUG UUG@LB@3'-UUU...GGUUA U UG UAGUG...UCA-5'@LB@ | |@LB@ 161 53@LB@@LB@@LB@Energy -12.15 kcal/mol@LB@Hybridization Energy -18.8897 kcal/mol@LB@Unfolding Energy - mRNA 4.02107 kcal/mol@LB@Unfolding Energy - sRNA 3.80548 kcal/mol@LB@@LB@Position - mRNA 131 -- 234@LB@Position - sRNA 54 -- 160@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 77 -- 83@LB@ |
186 |
0.01044 |
0.1967 |
stm1725 |
trpC |
-12.00 |
0.335236 |
146 -- 174 |
55 -- 86 |
bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
|
_____________145_______________175\n_____________|_________________|\n5'-AAA...GUUCU____________C____AUGAC...AGC-3'\n______________GCGCAACGGCAC_GCAU\n______________:|:||||::|||_:|||\n______________UGUGUUGUUGUG_UGUA\n3'-UUU...ACGUU____________U____GUGUU...UCA-5'\n_____________|_________________|\n_____________87________________54\n |
151 -- 157 |
75 -- 81 |
-20.8979 kcal/mol |
6.12922 kcal/mol |
3.85824 kcal/mol |
145 175@LB@ | |@LB@5'-AAA...GUUCU C AUGAC...AGC-3'@LB@ GCGCAACGGCAC GCAU@LB@ :|:||||::||| :|||@LB@ UGUGUUGUUGUG UGUA@LB@3'-UUU...ACGUU U GUGUU...UCA-5'@LB@ | |@LB@ 87 54@LB@@LB@@LB@Energy -12.00 kcal/mol@LB@Hybridization Energy -20.8979 kcal/mol@LB@Unfolding Energy - mRNA 6.12922 kcal/mol@LB@Unfolding Energy - sRNA 3.85824 kcal/mol@LB@@LB@Position - mRNA 146 -- 174@LB@Position - sRNA 55 -- 86@LB@Position Seed - mRNA 151 -- 157@LB@Position Seed - sRNA 75 -- 81@LB@ |
60 |
0.002585 |
0.1534 |
stm0758 |
ybgR |
-11.90 |
0.345594 |
235 -- 293 |
32 -- 91 |
cation transporter |
|
_____________234_________________________294\n_____________|___________________________|\n5'-GGU...ACACC___CG___G__________U_______CUGCU...UCC-3'\n______________UGC__AAA_AUAAUAAUGC__CGUCGC\n______________|||__|||_|:||:||::|__|:||:|\n______________ACG__UUU_UGUUGUUGUG__GUAGUG\n3'-UUU...GGUUA________G__________UU______UUGGC...UCA-5'\n_____________|___________________________|\n_____________92__________________________31\n |
247 -- 253 |
75 -- 81 |
-19.147 kcal/mol |
4.2306 kcal/mol |
5.6854 kcal/mol |
234 294@LB@ | |@LB@5'-GGU...ACACC CG G U CUGCU...UCC-3'@LB@ UGC AAA AUAAUAAUGC CGUCGC@LB@ ||| ||| |:||:||::| |:||:|@LB@ ACG UUU UGUUGUUGUG GUAGUG@LB@3'-UUU...GGUUA G UU UUGGC...UCA-5'@LB@ | |@LB@ 92 31@LB@@LB@@LB@Energy -11.90 kcal/mol@LB@Hybridization Energy -19.147 kcal/mol@LB@Unfolding Energy - mRNA 4.2306 kcal/mol@LB@Unfolding Energy - sRNA 5.6854 kcal/mol@LB@@LB@Position - mRNA 235 -- 293@LB@Position - sRNA 32 -- 91@LB@Position Seed - mRNA 247 -- 253@LB@Position Seed - sRNA 75 -- 81@LB@ |
67 |
0.003193 |
0.1596 |
stm0122 |
ftsI |
-11.87 |
0.349270 |
199 -- 241 |
52 -- 90 |
peptidoglycan glycosyltransferase FtsI |
|
_____________198_______________________242\n_____________|_________________________|\n5'-GUU...CGCGA____UUG_____UG___________CUGAU...UGG-3'\n______________UGCA___GACAU__AAUGGCGCAAC\n______________||||___:|||:__||:::|:||||\n______________ACGU___UUGUG__UUGUUGUGUUG\n3'-UUU...GGUUA_________________________UAGUG...UCA-5'\n_____________|_________________________|\n_____________91________________________51\n |
62 -- 68 |
72 -- 78 |
-17.673 kcal/mol |
4.85802 kcal/mol |
3.80548 kcal/mol |
198 242@LB@ | |@LB@5'-GUU...CGCGA UUG UG CUGAU...UGG-3'@LB@ UGCA GACAU AAUGGCGCAAC@LB@ |||| :|||: ||:::|:||||@LB@ ACGU UUGUG UUGUUGUGUUG@LB@3'-UUU...GGUUA UAGUG...UCA-5'@LB@ | |@LB@ 91 51@LB@@LB@@LB@Energy -11.87 kcal/mol@LB@Hybridization Energy -17.673 kcal/mol@LB@Unfolding Energy - mRNA 4.85802 kcal/mol@LB@Unfolding Energy - sRNA 3.80548 kcal/mol@LB@@LB@Position - mRNA 199 -- 241@LB@Position - sRNA 52 -- 90@LB@Position Seed - mRNA 62 -- 68@LB@Position Seed - sRNA 72 -- 78@LB@ |
129 |
0.006472 |
0.1774 |
stm0158 |
acnB |
-11.80 |
0.356459 |
140 -- 172 |
33 -- 60 |
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|
_____________139________________173\n_____________|__________________|\n5'-AUU...CUUUU_________G_U______UUAAA...UGC-3'\n______________UUGUAAACA_A_UAACAC\n______________|||:|||||_|_:|||||\n______________AACGUUUGU_U_GUUGUG\n3'-UUU...UGGUU_________G_U______UUGUA...UCA-5'\n_____________|__________________|\n_____________61_________________32\n |
48 -- 54 |
84 -- 90 |
-17.8051 kcal/mol |
3.41045 kcal/mol |
3.73018 kcal/mol |
139 173@LB@ | |@LB@5'-AUU...CUUUU G U UUAAA...UGC-3'@LB@ UUGUAAACA A UAACAC@LB@ |||:||||| | :|||||@LB@ AACGUUUGU U GUUGUG@LB@3'-UUU...UGGUU G U UUGUA...UCA-5'@LB@ | |@LB@ 61 32@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -17.8051 kcal/mol@LB@Unfolding Energy - mRNA 3.41045 kcal/mol@LB@Unfolding Energy - sRNA 3.73018 kcal/mol@LB@@LB@Position - mRNA 140 -- 172@LB@Position - sRNA 33 -- 60@LB@Position Seed - mRNA 48 -- 54@LB@Position Seed - sRNA 84 -- 90@LB@ |
144 |
0.00736 |
0.182 |
stm4559 |
yjjG |
-11.80 |
0.356804 |
189 -- 218 |
128 -- 159 |
putative haloacid dehalogenase-like hydrolase |
|
_____________188_________________________________219\n_____________|___________________________________|\n5'-UUG...AUAAA_G_____A____U__________________CU__AUUUU...UCA-3'\n______________A_AGGCA_GGUG_AAUG_AU__GAAGUGGGA__GG\n______________|_||:||_|||:_||||_|:__||||||::|__||\n______________U_UCUGU_CCAU_UUAC_UG__CUUCACUUU__CC\n3'-UUU...AUACC_G_____C_________A__UC_________UU__CAUCA...UCA-5'\n_____________|___________________________________|\n_____________160_________________________________127\n |
208 -- 214 |
132 -- 138 |
-24.694 kcal/mol |
5.33554 kcal/mol |
7.83417 kcal/mol |
188 219@LB@ | |@LB@5'-UUG...AUAAA G A U CU AUUUU...UCA-3'@LB@ A AGGCA GGUG AAUG AU GAAGUGGGA GG@LB@ | ||:|| |||: |||| |: ||||||::| ||@LB@ U UCUGU CCAU UUAC UG CUUCACUUU CC@LB@3'-UUU...AUACC G C A UC UU CAUCA...UCA-5'@LB@ | |@LB@ 160 127@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -24.694 kcal/mol@LB@Unfolding Energy - mRNA 5.33554 kcal/mol@LB@Unfolding Energy - sRNA 7.83417 kcal/mol@LB@@LB@Position - mRNA 189 -- 218@LB@Position - sRNA 128 -- 159@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 132 -- 138@LB@ |