160 |
0.008331 |
0.1845 |
stm0002 |
thrA |
-15.10 |
0.113872 |
18 -- 81 |
44 -- 90 |
bifunctional aspartate kinase/homoserine dehydrogenase I |
|
_____________17______________________82\n_____________|_______________________|\n5'-CCA...UACAA________AAUAA__________AGUAC...UAG-3'\n______________GACAGACA_____AAAUG_ACAG\n______________||||||||_____|||||_||||\n______________CUGUCUGU_____UUUAC_UGUC\n3'-UUU...GAUAC________CCCA______A____CUUCA...UCA-5'\n_____________|_______________________|\n_____________91______________________43\n |
19 -- 25 |
155 -- 161 |
-19.4516 kcal/mol |
0.236149 kcal/mol |
3.68511 kcal/mol |
17 82@LB@ | |@LB@5'-CCA...UACAA AAUAA AGUAC...UAG-3'@LB@ GACAGACA AAAUG ACAG@LB@ |||||||| ||||| ||||@LB@ CUGUCUGU UUUAC UGUC@LB@3'-UUU...GAUAC CCCA A CUUCA...UCA-5'@LB@ | |@LB@ 91 43@LB@@LB@@LB@Energy -15.10 kcal/mol@LB@Hybridization Energy -19.4516 kcal/mol@LB@Unfolding Energy - mRNA 0.236149 kcal/mol@LB@Unfolding Energy - sRNA 3.68511 kcal/mol@LB@@LB@Position - mRNA 18 -- 81@LB@Position - sRNA 44 -- 90@LB@Position Seed - mRNA 19 -- 25@LB@Position Seed - sRNA 155 -- 161@LB@ |
43 |
0.001574 |
0.1267 |
stm4453 |
treC |
-17.28 |
0.050040 |
221 -- 269 |
37 -- 81 |
trehalose- 6-P hydrolase |
|
_____________220____________________270\n_____________|______________________|\n5'-CGU...CGCAC_______AA_____________UAUUC...GCG-3'\n______________UUGCAGG__ACAACAAU__GAC\n______________|||||::__|||||||:__:||\n______________AACGUUU__UGUUGUUG__UUG\n3'-UUU...UGGUU_______G_________UG___UAGUG...UCA-5'\n_____________|______________________|\n_____________82_____________________36\n |
196 -- 202 |
77 -- 83 |
-15.8671 kcal/mol |
3.0955 kcal/mol |
3.80821 kcal/mol |
220 270@LB@ | |@LB@5'-CGU...CGCAC AA UAUUC...GCG-3'@LB@ UUGCAGG ACAACAAU GAC@LB@ |||||:: |||||||: :||@LB@ AACGUUU UGUUGUUG UUG@LB@3'-UUU...UGGUU G UG UAGUG...UCA-5'@LB@ | |@LB@ 82 36@LB@@LB@@LB@Energy -17.28 kcal/mol@LB@Hybridization Energy -15.8671 kcal/mol@LB@Unfolding Energy - mRNA 3.0955 kcal/mol@LB@Unfolding Energy - sRNA 3.80821 kcal/mol@LB@@LB@Position - mRNA 221 -- 269@LB@Position - sRNA 37 -- 81@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 77 -- 83@LB@ |
14 |
0.0002233 |
0.05681 |
stm3843 |
trmE |
-16.53 |
0.066478 |
207 -- 249 |
37 -- 85 |
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE |
|
_____________206______________250\n_____________|________________|\n5'-UGA...CAUGA________________UAUCG...CGC-3'\n______________GC___CAUAACGACAC\n______________||___||:|||:||||\n______________CG___GUGUUGUUGUG\n3'-UUU...GUUAA__UUU___________UUGUA...UCA-5'\n_____________|________________|\n_____________86_______________36\n |
211 -- 217 |
75 -- 81 |
-15.3625 kcal/mol |
2.22645 kcal/mol |
3.72363 kcal/mol |
206 250@LB@ | |@LB@5'-UGA...CAUGA UAUCG...CGC-3'@LB@ GC CAUAACGACAC@LB@ || ||:|||:||||@LB@ CG GUGUUGUUGUG@LB@3'-UUU...GUUAA UUU UUGUA...UCA-5'@LB@ | |@LB@ 86 36@LB@@LB@@LB@Energy -16.53 kcal/mol@LB@Hybridization Energy -15.3625 kcal/mol@LB@Unfolding Energy - mRNA 2.22645 kcal/mol@LB@Unfolding Energy - sRNA 3.72363 kcal/mol@LB@@LB@Position - mRNA 207 -- 249@LB@Position - sRNA 37 -- 85@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 75 -- 81@LB@ |
186 |
0.01044 |
0.1967 |
stm1725 |
trpC |
-12.00 |
0.335236 |
146 -- 174 |
55 -- 86 |
bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
|
_____________145_______________175\n_____________|_________________|\n5'-AAA...GUUCU____________C____AUGAC...AGC-3'\n______________GCGCAACGGCAC_GCAU\n______________:|:||||::|||_:|||\n______________UGUGUUGUUGUG_UGUA\n3'-UUU...ACGUU____________U____GUGUU...UCA-5'\n_____________|_________________|\n_____________87________________54\n |
151 -- 157 |
75 -- 81 |
-20.8979 kcal/mol |
6.12922 kcal/mol |
3.85824 kcal/mol |
145 175@LB@ | |@LB@5'-AAA...GUUCU C AUGAC...AGC-3'@LB@ GCGCAACGGCAC GCAU@LB@ :|:||||::||| :|||@LB@ UGUGUUGUUGUG UGUA@LB@3'-UUU...ACGUU U GUGUU...UCA-5'@LB@ | |@LB@ 87 54@LB@@LB@@LB@Energy -12.00 kcal/mol@LB@Hybridization Energy -20.8979 kcal/mol@LB@Unfolding Energy - mRNA 6.12922 kcal/mol@LB@Unfolding Energy - sRNA 3.85824 kcal/mol@LB@@LB@Position - mRNA 146 -- 174@LB@Position - sRNA 55 -- 86@LB@Position Seed - mRNA 151 -- 157@LB@Position Seed - sRNA 75 -- 81@LB@ |
79 |
0.003723 |
0.1596 |
stm1723 |
trpE |
-16.56 |
0.065817 |
202 -- 256 |
41 -- 91 |
anthranilate synthase subunit I |
|
_____________201__________________257\n_____________|____________________|\n5'-UGA...AAAUG__________UU________CGGUU...CGG-3'\n______________GCAGCGACAU__GCAUUACA\n______________:||:|:|||:__:|||:|||\n______________UGUUGUUGUG__UGUAGUGU\n3'-UUU...GUUUG__________U_________UGGCA...UCA-5'\n_____________|____________________|\n_____________92___________________40\n |
78 -- 84 |
66 -- 72 |
-20.8013 kcal/mol |
5.41524 kcal/mol |
5.89278 kcal/mol |
201 257@LB@ | |@LB@5'-UGA...AAAUG UU CGGUU...CGG-3'@LB@ GCAGCGACAU GCAUUACA@LB@ :||:|:|||: :|||:|||@LB@ UGUUGUUGUG UGUAGUGU@LB@3'-UUU...GUUUG U UGGCA...UCA-5'@LB@ | |@LB@ 92 40@LB@@LB@@LB@Energy -16.56 kcal/mol@LB@Hybridization Energy -20.8013 kcal/mol@LB@Unfolding Energy - mRNA 5.41524 kcal/mol@LB@Unfolding Energy - sRNA 5.89278 kcal/mol@LB@@LB@Position - mRNA 202 -- 256@LB@Position - sRNA 41 -- 91@LB@Position Seed - mRNA 78 -- 84@LB@Position Seed - sRNA 66 -- 72@LB@ |
143 |
0.007336 |
0.182 |
stm2276 |
ubiG |
-14.65 |
0.134291 |
225 -- 278 |
36 -- 81 |
2-octaprenyl-6-hydroxy phenol methylase |
|
_____________224_________________279\n_____________|___________________|\n5'-CAC...CGGCA____________CA_____UUUGC...AAU-3'\n______________GUAGAUAUAACG__GCGAC\n______________|:|:|:|:|||:__:|:||\n______________CGUUUGUGUUGU__UGUUG\n3'-UUU...GUUAA____________UG_____UAGUG...UCA-5'\n_____________|___________________|\n_____________82__________________35\n |
134 -- 140 |
80 -- 86 |
-18.0681 kcal/mol |
5.41873 kcal/mol |
3.80362 kcal/mol |
224 279@LB@ | |@LB@5'-CAC...CGGCA CA UUUGC...AAU-3'@LB@ GUAGAUAUAACG GCGAC@LB@ |:|:|:|:|||: :|:||@LB@ CGUUUGUGUUGU UGUUG@LB@3'-UUU...GUUAA UG UAGUG...UCA-5'@LB@ | |@LB@ 82 35@LB@@LB@@LB@Energy -14.65 kcal/mol@LB@Hybridization Energy -18.0681 kcal/mol@LB@Unfolding Energy - mRNA 5.41873 kcal/mol@LB@Unfolding Energy - sRNA 3.80362 kcal/mol@LB@@LB@Position - mRNA 225 -- 278@LB@Position - sRNA 36 -- 81@LB@Position Seed - mRNA 134 -- 140@LB@Position Seed - sRNA 80 -- 86@LB@ |
119 |
0.005831 |
0.1745 |
stm1998 |
umuD |
-19.31 |
0.022806 |
33 -- 72 |
46 -- 81 |
DNA polymerase V subunit UmuD |
|
_____________32___________________73\n_____________|____________________|\n5'-AGA...AAAUA____C_______________CGGAA...ACA-3'\n______________UGCG_ACAUGACAAUACAAC\n______________|||:_|||::||||:|||||\n______________ACGU_UGUGUUGUUGUGUUG\n3'-UUU...GGUUA____U_______________UAGUG...UCA-5'\n_____________|____________________|\n_____________82___________________45\n |
45 -- 51 |
72 -- 78 |
-23.5929 kcal/mol |
1.21213 kcal/mol |
3.80548 kcal/mol |
32 73@LB@ | |@LB@5'-AGA...AAAUA C CGGAA...ACA-3'@LB@ UGCG ACAUGACAAUACAAC@LB@ |||: |||::||||:|||||@LB@ ACGU UGUGUUGUUGUGUUG@LB@3'-UUU...GGUUA U UAGUG...UCA-5'@LB@ | |@LB@ 82 45@LB@@LB@@LB@Energy -19.31 kcal/mol@LB@Hybridization Energy -23.5929 kcal/mol@LB@Unfolding Energy - mRNA 1.21213 kcal/mol@LB@Unfolding Energy - sRNA 3.80548 kcal/mol@LB@@LB@Position - mRNA 33 -- 72@LB@Position - sRNA 46 -- 81@LB@Position Seed - mRNA 45 -- 51@LB@Position Seed - sRNA 72 -- 78@LB@ |
57 |
0.002298 |
0.14 |
stm3921 |
wecC |
-19.39 |
0.022107 |
89 -- 132 |
46 -- 91 |
UDP-N-acetyl-D-mannosamine dehydrogenase |
|
_____________88_____________________________________133\n_____________|______________________________________|\n5'-ACC...GCGUC___U__________AAAUG____________A______GCGCC...AUA-3'\n______________UGC__GCACGACGA_____AAUAUCA_AACC_UGAGCC\n______________|||__:|||:||:|_____||:||||_||||_|:||||\n______________ACG__UGUGUUGUU_____UUGUAGU_UUGG_AUUCGG\n3'-UUU...GGUUA___UU_________GUG_________G____C______UUUUC...UCA-5'\n_____________|______________________________________|\n_____________92_____________________________________45\n |
107 -- 113 |
68 -- 74 |
-32.9193 kcal/mol |
8.51619 kcal/mol |
11.8308 kcal/mol |
88 133@LB@ | |@LB@5'-ACC...GCGUC U AAAUG A GCGCC...AUA-3'@LB@ UGC GCACGACGA AAUAUCA AACC UGAGCC@LB@ ||| :|||:||:| ||:|||| |||| |:||||@LB@ ACG UGUGUUGUU UUGUAGU UUGG AUUCGG@LB@3'-UUU...GGUUA UU GUG G C UUUUC...UCA-5'@LB@ | |@LB@ 92 45@LB@@LB@@LB@Energy -19.39 kcal/mol@LB@Hybridization Energy -32.9193 kcal/mol@LB@Unfolding Energy - mRNA 8.51619 kcal/mol@LB@Unfolding Energy - sRNA 11.8308 kcal/mol@LB@@LB@Position - mRNA 89 -- 132@LB@Position - sRNA 46 -- 91@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 68 -- 74@LB@ |
153 |
0.008123 |
0.1845 |
stm2512 |
xseA |
-14.57 |
0.138273 |
215 -- 252 |
42 -- 82 |
exodeoxyribonuclease VII large subunit |
|
_____________214________253\n_____________|__________|\n5'-CGU...UUUUU__________GCCUU...GCG-3'\n______________ACCGUAAGCC\n______________||||||||||\n______________UGGCAUUCGG\n3'-UUU...AGUGU__________UUUUC...UCA-5'\n_____________|__________|\n_____________83_________41\n |
234 -- 240 |
56 -- 62 |
-17.1871 kcal/mol |
1.1981 kcal/mol |
7.48121 kcal/mol |
214 253@LB@ | |@LB@5'-CGU...UUUUU GCCUU...GCG-3'@LB@ ACCGUAAGCC@LB@ ||||||||||@LB@ UGGCAUUCGG@LB@3'-UUU...AGUGU UUUUC...UCA-5'@LB@ | |@LB@ 83 41@LB@@LB@@LB@Energy -14.57 kcal/mol@LB@Hybridization Energy -17.1871 kcal/mol@LB@Unfolding Energy - mRNA 1.1981 kcal/mol@LB@Unfolding Energy - sRNA 7.48121 kcal/mol@LB@@LB@Position - mRNA 215 -- 252@LB@Position - sRNA 42 -- 82@LB@Position Seed - mRNA 234 -- 240@LB@Position Seed - sRNA 56 -- 62@LB@ |
177 |
0.009665 |
0.1945 |
stm0079 |
yaaU |
-14.30 |
0.152587 |
187 -- 218 |
40 -- 79 |
MFS transporter |
|
_____________186___________219\n_____________|_____________|\n5'-GAA...GUUGA____G________CAUGC...UGC-3'\n______________AACA_GACAUCAC\n______________||||_:|||||||\n______________UUGU_UUGUAGUG\n3'-UUU...UGUUG____G________UUGGC...UCA-5'\n_____________|_____________|\n_____________80____________39\n |
193 -- 199 |
67 -- 73 |
-15.1412 kcal/mol |
3.61479 kcal/mol |
3.57243 kcal/mol |
186 219@LB@ | |@LB@5'-GAA...GUUGA G CAUGC...UGC-3'@LB@ AACA GACAUCAC@LB@ |||| :|||||||@LB@ UUGU UUGUAGUG@LB@3'-UUU...UGUUG G UUGGC...UCA-5'@LB@ | |@LB@ 80 39@LB@@LB@@LB@Energy -14.30 kcal/mol@LB@Hybridization Energy -15.1412 kcal/mol@LB@Unfolding Energy - mRNA 3.61479 kcal/mol@LB@Unfolding Energy - sRNA 3.57243 kcal/mol@LB@@LB@Position - mRNA 187 -- 218@LB@Position - sRNA 40 -- 79@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 67 -- 73@LB@ |