Freiburg RNA Tools
MutaRNA - RNA Mutation Analysis
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MutaRNA

MutaRNA - RNA Mutation Analysis

MutaRNA (Mutational Analysis of RNAs) predicts and visualizes the mutation-induced structure changes of a single-nucleotide polymorphism (SNP) in an RNA sequence. This covers changes in the accessibility (single-strandedness) of the molecule, its intra-molecular base pairing potential and its the base pairing probabilities. Combined with evaluation results of tools like remuRNA and RNAsnp, MutaRNA enables a detailed evaluation of a mutation's effects on RNA structure formation.

For articles describing the tool and webserver refer to the reference section below. Please cite us when using our tools.
For more information check the help page.

Try MutaRNA with these examples:

Note: the MutaRNA webserver will be offline for maintenance from 02/12/2021 to 15/01/2022.

Due to an upcoming hardware replacement and restructuring, we have to temporarily stop the Freiburg RNA tools service. We will restart the service as soon as possible, hopefully before the announced date.

We apologize for the inconvenience.

Sequence Parameters

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Folding options

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When using MutaRNA please cite :

Results are computed with MutaRNA version 1.3.0 (using RNAplfold 2.4.14, remuRNA 1.0, RNAsnp 1.2)