CLUSTAL W --- LocARNA 1.9.1 .((((((.....((...((.((((..((..........))..)))).))...))....))))))............((((.((.((.......((.((((((............)))).) ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGCCUA-----GUAUUCUGCCAGCUUCGGAAAGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUCCAUUCCCAGCUUGCUCCGUAGCUGGCG ACA5 UGCAGCC-GUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGCCCAG--AAGGCUGCCACAGAAA--CACUGUGACUCAUGGGCCCUGUUCCUGUGUC---------CCAG-G ACA30 UGGCACU-----UUCACAGUUCCUUCCCCAGGCAGUGGGGCCAGGAUUUGGUAGCU--GGUGCUGAGAGAAAACCCUUGAUUGUAU-----UCUUGCCCUGGGAUUAU-----ACCAGUG .((((((-----((...((.((((..((..........))..)))).))...))..--))))))............((((.((.((-----..((.((((((......-----.)))).) #A1 .................................................................AAAAAA................................................. #A2 .................................................................123456................................................. ).))..........)))).))))----... ACA7 AUUGGAAGACA-----CUCUGCG----ACA ACA5 CUCAGGGAUAAAUUUGGUUACAG----ACA ACA30 GCAA--------CUGUCACUCAAUGGGACA ).))--------..)))).))))....... #A1 ...........................BBB #A2 ...........................123