176 |
0.009613 |
0.1945 |
stm3378 |
N/A |
-14.56 |
0.138793 |
155 -- 243 |
45 -- 125 |
sulfoxide reductase heme-binding subunit YedZ |
|
_____________154_______________________________________________________________________________________244\n_____________|_________________________________________________________________________________________|\n5'-UGU...AAUGA____GCU_____GU____C_____CAAU_______AGAAUUU____G____U___________A____G_______U____________UUGUC...GUG-3'\n______________AGUC___UCGCU__AUCG_GGUCU____UUGCGGG_______UUAA_UGCG__C_UGACAGCA_AACA__AUAACC___GGCUAAAAGU\n______________||||___|||||__|:||_|||||____|:||:|:_______::||_|||:__|_::|||:||_||||__|:||||___:||:|||||:\n______________UCAG___AGCGA__UGGC_CCAGA____AGCGUCU_______GGUU_ACGU__G_GUUGUUGU_UUGU__UGUUGG___UCGGUUUUCG\n3'-UUU...UCCCA__________________A_____CUU___________________A____UU_U________G____AG______CAU__________GGUAG...UCA-5'\n_____________|_________________________________________________________________________________________|\n_____________126_______________________________________________________________________________________44\n |
209 -- 215 |
76 -- 82 |
-59.1156 kcal/mol |
19.0244 kcal/mol |
31.7466 kcal/mol |
154 244@LB@ | |@LB@5'-UGU...AAUGA GCU GU C CAAU AGAAUUU G U A G U UUGUC...GUG-3'@LB@ AGUC UCGCU AUCG GGUCU UUGCGGG UUAA UGCG C UGACAGCA AACA AUAACC GGCUAAAAGU@LB@ |||| ||||| |:|| ||||| |:||:|: ::|| |||: | ::|||:|| |||| |:|||| :||:|||||:@LB@ UCAG AGCGA UGGC CCAGA AGCGUCU GGUU ACGU G GUUGUUGU UUGU UGUUGG UCGGUUUUCG@LB@3'-UUU...UCCCA A CUU A UU U G AG CAU GGUAG...UCA-5'@LB@ | |@LB@ 126 44@LB@@LB@@LB@Energy -14.56 kcal/mol@LB@Hybridization Energy -59.1156 kcal/mol@LB@Unfolding Energy - mRNA 19.0244 kcal/mol@LB@Unfolding Energy - sRNA 31.7466 kcal/mol@LB@@LB@Position - mRNA 155 -- 243@LB@Position - sRNA 45 -- 125@LB@Position Seed - mRNA 209 -- 215@LB@Position Seed - sRNA 76 -- 82@LB@ |
4 |
5.758e-05 |
0.04123 |
stm3564 |
livK |
-17.90 |
0.039430 |
157 -- 215 |
37 -- 90 |
leucine ABC transporter subunit substrate-binding protein LivK |
|
_____________156______________________216\n_____________|________________________|\n5'-UUU...GCAAA_____A__________________AUGGG...CGA-3'\n______________AAACA_AAC_AUAUAACAUCACGA\n______________|||||_|||_|:|:||||||||:|\n______________UUUGU_UUG_UGUGUUGUAGUGUU\n3'-UUU...UAACG_____G___U______________GGCAU...UCA-5'\n_____________|________________________|\n_____________91_______________________36\n |
178 -- 184 |
65 -- 71 |
-21.8749 kcal/mol |
0.694231 kcal/mol |
6.38817 kcal/mol |
156 216@LB@ | |@LB@5'-UUU...GCAAA A AUGGG...CGA-3'@LB@ AAACA AAC AUAUAACAUCACGA@LB@ ||||| ||| |:|:||||||||:|@LB@ UUUGU UUG UGUGUUGUAGUGUU@LB@3'-UUU...UAACG G U GGCAU...UCA-5'@LB@ | |@LB@ 91 36@LB@@LB@@LB@Energy -17.90 kcal/mol@LB@Hybridization Energy -21.8749 kcal/mol@LB@Unfolding Energy - mRNA 0.694231 kcal/mol@LB@Unfolding Energy - sRNA 6.38817 kcal/mol@LB@@LB@Position - mRNA 157 -- 215@LB@Position - sRNA 37 -- 90@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 65 -- 71@LB@ |
6 |
7.515e-05 |
0.04123 |
stm0665 |
gltI |
-17.87 |
0.039793 |
157 -- 199 |
35 -- 81 |
glutamate/aspartate transporter |
|
_____________156__________________200\n_____________|____________________|\n5'-CGA...UGCAG____UA______U_______GCUAU...CUG-3'\n______________GCAA__ACAACA_CACAAUA\n______________||||__||||||_|||||:|\n______________CGUU__UGUUGU_GUGUUGU\n3'-UUU...GUUAA____UG______U_______AGUGU...UCA-5'\n_____________|____________________|\n_____________82___________________34\n |
170 -- 176 |
71 -- 77 |
-19.9204 kcal/mol |
1.29616 kcal/mol |
3.80671 kcal/mol |
156 200@LB@ | |@LB@5'-CGA...UGCAG UA U GCUAU...CUG-3'@LB@ GCAA ACAACA CACAAUA@LB@ |||| |||||| |||||:|@LB@ CGUU UGUUGU GUGUUGU@LB@3'-UUU...GUUAA UG U AGUGU...UCA-5'@LB@ | |@LB@ 82 34@LB@@LB@@LB@Energy -17.87 kcal/mol@LB@Hybridization Energy -19.9204 kcal/mol@LB@Unfolding Energy - mRNA 1.29616 kcal/mol@LB@Unfolding Energy - sRNA 3.80671 kcal/mol@LB@@LB@Position - mRNA 157 -- 199@LB@Position - sRNA 35 -- 81@LB@Position Seed - mRNA 170 -- 176@LB@Position Seed - sRNA 71 -- 77@LB@ |
48 |
0.001762 |
0.1291 |
stm4523 |
yjiW |
-20.55 |
0.014078 |
157 -- 299 |
40 -- 186 |
endoribonuclease SymE |
|
_____________156____________________________________________________________________________________________300\n_____________|______________________________________________________________________________________________|\n5'-GUG...AUUUU____AA___CCA__A__A_______CCAUUCU__________CG______UC__GAAGUCUCCC___________C______CUU_________UAUGC...AUU-3'\n______________AGGG__UAG___UC_UG_CUACCGU_______AUUGCAGAUC___UGCGA__CA__________CAACAA_AUAA_CGUCAC___ACCGUGAGU\n______________||||__|||___||_:|_|||||||_______||:|||||:|___|||:|__||__________||||||_|:||_|:||||___|||||:||:\n______________UCCC__AUC___AG_GC_GAUGGCA_______UAGCGUCUGG___ACGUU__GU__________GUUGUU_UGUU_GUAGUG___UGGCAUUCG\n3'-UUU...CUUUU______________A__________CCAGACU__________UUA_____U___________________G___________U___________GUUUU...UCA-5'\n_____________|______________________________________________________________________________________________|\n_____________187____________________________________________________________________________________________39\n |
222 -- 228 |
95 -- 101 |
-59.8396 kcal/mol |
18.2388 kcal/mol |
27.0823 kcal/mol |
156 300@LB@ | |@LB@5'-GUG...AUUUU AA CCA A A CCAUUCU CG UC GAAGUCUCCC C CUU UAUGC...AUU-3'@LB@ AGGG UAG UC UG CUACCGU AUUGCAGAUC UGCGA CA CAACAA AUAA CGUCAC ACCGUGAGU@LB@ |||| ||| || :| ||||||| ||:|||||:| |||:| || |||||| |:|| |:|||| |||||:||:@LB@ UCCC AUC AG GC GAUGGCA UAGCGUCUGG ACGUU GU GUUGUU UGUU GUAGUG UGGCAUUCG@LB@3'-UUU...CUUUU A CCAGACU UUA U G U GUUUU...UCA-5'@LB@ | |@LB@ 187 39@LB@@LB@@LB@Energy -20.55 kcal/mol@LB@Hybridization Energy -59.8396 kcal/mol@LB@Unfolding Energy - mRNA 18.2388 kcal/mol@LB@Unfolding Energy - sRNA 27.0823 kcal/mol@LB@@LB@Position - mRNA 157 -- 299@LB@Position - sRNA 40 -- 186@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 95 -- 101@LB@ |
10 |
0.0001468 |
0.05229 |
stm0680 |
asnB |
-17.15 |
0.052408 |
158 -- 224 |
32 -- 90 |
asparagine synthetase B |
|
_____________157________________________225\n_____________|__________________________|\n5'-CAU...GUCAA_________AAAAGU___________GAUUA...CGG-3'\n______________GCAAAUACA______ACGACGCAACA\n______________|||||:|||______||:||:|||||\n______________CGUUUGUGU______UGUUGUGUUGU\n3'-UUU...GUUAA__________________________AGUGU...UCA-5'\n_____________|__________________________|\n_____________91_________________________31\n |
177 -- 183 |
71 -- 77 |
-23.872 kcal/mol |
3.8402 kcal/mol |
3.80671 kcal/mol |
157 225@LB@ | |@LB@5'-CAU...GUCAA AAAAGU GAUUA...CGG-3'@LB@ GCAAAUACA ACGACGCAACA@LB@ |||||:||| ||:||:|||||@LB@ CGUUUGUGU UGUUGUGUUGU@LB@3'-UUU...GUUAA AGUGU...UCA-5'@LB@ | |@LB@ 91 31@LB@@LB@@LB@Energy -17.15 kcal/mol@LB@Hybridization Energy -23.872 kcal/mol@LB@Unfolding Energy - mRNA 3.8402 kcal/mol@LB@Unfolding Energy - sRNA 3.80671 kcal/mol@LB@@LB@Position - mRNA 158 -- 224@LB@Position - sRNA 32 -- 90@LB@Position Seed - mRNA 177 -- 183@LB@Position Seed - sRNA 71 -- 77@LB@ |
15 |
0.000269 |
0.06194 |
stm3630 |
dppA |
-21.81 |
0.008578 |
158 -- 199 |
51 -- 92 |
ABC transporter substrate-binding protein |
|
_____________157_____________________________________200\n_____________|_______________________________________|\n5'-AUU...AGCCU______AGG___A__________________________AGAAG...AUU-3'\n______________UUGCAA___GCA_AACAACAU_ACAUCACAAUUG_GAGC\n______________||||||___:||_|||||||:_|||||||||::|_:|||\n______________AACGUU___UGU_UUGUUGUG_UGUAGUGUUGGC_UUCG\n3'-UUU...UGGUU____________G________U____________A____GUUUU...UCA-5'\n_____________|_______________________________________|\n_____________93______________________________________50\n |
183 -- 189 |
63 -- 69 |
-36.2763 kcal/mol |
6.81868 kcal/mol |
11.5217 kcal/mol |
157 200@LB@ | |@LB@5'-AUU...AGCCU AGG A AGAAG...AUU-3'@LB@ UUGCAA GCA AACAACAU ACAUCACAAUUG GAGC@LB@ |||||| :|| |||||||: |||||||||::| :|||@LB@ AACGUU UGU UUGUUGUG UGUAGUGUUGGC UUCG@LB@3'-UUU...UGGUU G U A GUUUU...UCA-5'@LB@ | |@LB@ 93 50@LB@@LB@@LB@Energy -21.81 kcal/mol@LB@Hybridization Energy -36.2763 kcal/mol@LB@Unfolding Energy - mRNA 6.81868 kcal/mol@LB@Unfolding Energy - sRNA 11.5217 kcal/mol@LB@@LB@Position - mRNA 158 -- 199@LB@Position - sRNA 51 -- 92@LB@Position Seed - mRNA 183 -- 189@LB@Position Seed - sRNA 63 -- 69@LB@ |
89 |
0.004143 |
0.1596 |
stm2957 |
ygcA |
-15.40 |
0.101796 |
159 -- 208 |
35 -- 82 |
23S rRNA (uracil(1939)-C(5))-methyltransferase |
|
_____________158____________________________________________209\n_____________|______________________________________________|\n5'-AUA...UACUC_____AACG____GU_________UCAG___________UA_____AAUGA...GUC-3'\n______________UGCAA____GCGC__GACGACGCG____AUCAUAACCGU__AAGUC\n______________|||||____:|:|__:||:||:|:____||||:||||||__|||:|\n______________ACGUU____UGUG__UUGUUGUGU____UAGUGUUGGCA__UUCGG\n3'-UUU...GGUUA________________________UG____________________UUUUC...UCA-5'\n_____________|______________________________________________|\n_____________83_____________________________________________34\n |
250 -- 256 |
61 -- 67 |
-36.475 kcal/mol |
14.3441 kcal/mol |
11.8308 kcal/mol |
158 209@LB@ | |@LB@5'-AUA...UACUC AACG GU UCAG UA AAUGA...GUC-3'@LB@ UGCAA GCGC GACGACGCG AUCAUAACCGU AAGUC@LB@ ||||| :|:| :||:||:|: ||||:|||||| |||:|@LB@ ACGUU UGUG UUGUUGUGU UAGUGUUGGCA UUCGG@LB@3'-UUU...GGUUA UG UUUUC...UCA-5'@LB@ | |@LB@ 83 34@LB@@LB@@LB@Energy -15.40 kcal/mol@LB@Hybridization Energy -36.475 kcal/mol@LB@Unfolding Energy - mRNA 14.3441 kcal/mol@LB@Unfolding Energy - sRNA 11.8308 kcal/mol@LB@@LB@Position - mRNA 159 -- 208@LB@Position - sRNA 35 -- 82@LB@Position Seed - mRNA 250 -- 256@LB@Position Seed - sRNA 61 -- 67@LB@ |
90 |
0.004161 |
0.1596 |
stm1124 |
putA |
-17.89 |
0.039481 |
159 -- 201 |
125 -- 168 |
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase |
|
_____________158______________________________________________202\n_____________|________________________________________________|\n5'-UAA...CGCUA____U___UUA________A_C____A_____________________UGGGA...UAA-3'\n______________ACUA_UGG___GCAGAUAG_G_GAAU__ACAGG_AGU___AGAGGGUA\n______________||||_|||___:||||:||_|_:|||__|||||_|||___|:||||||\n______________UGAU_ACC___UGUCUGUC_C_UUUA__UGUCC_UCA___UUUCCCAU\n3'-UUU...AUUAG___________________C_A____CA_____U___CUU________CAGAG...UCA-5'\n_____________|________________________________________________|\n_____________169______________________________________________124\n |
195 -- 201 |
125 -- 131 |
-33.9858 kcal/mol |
7.26317 kcal/mol |
8.4265 kcal/mol |
158 202@LB@ | |@LB@5'-UAA...CGCUA U UUA A C A UGGGA...UAA-3'@LB@ ACUA UGG GCAGAUAG G GAAU ACAGG AGU AGAGGGUA@LB@ |||| ||| :||||:|| | :||| ||||| ||| |:||||||@LB@ UGAU ACC UGUCUGUC C UUUA UGUCC UCA UUUCCCAU@LB@3'-UUU...AUUAG C A CA U CUU CAGAG...UCA-5'@LB@ | |@LB@ 169 124@LB@@LB@@LB@Energy -17.89 kcal/mol@LB@Hybridization Energy -33.9858 kcal/mol@LB@Unfolding Energy - mRNA 7.26317 kcal/mol@LB@Unfolding Energy - sRNA 8.4265 kcal/mol@LB@@LB@Position - mRNA 159 -- 201@LB@Position - sRNA 125 -- 168@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 125 -- 131@LB@ |
112 |
0.005549 |
0.1728 |
stm0602 |
ybdH |
-14.01 |
0.169356 |
159 -- 193 |
39 -- 79 |
oxidoreductase |
|
_____________158_____________194\n_____________|_______________|\n5'-GCG...CCCUA_G_____________GAACC...AGC-3'\n______________A_GACAACACAACAU\n______________|_:||||||||||||\n______________U_UUGUUGUGUUGUA\n3'-UUU...GUUUG_G_____________GUGUU...UCA-5'\n_____________|_______________|\n_____________80______________38\n |
196 -- 202 |
70 -- 76 |
-18.8338 kcal/mol |
1.20586 kcal/mol |
3.77892 kcal/mol |
158 194@LB@ | |@LB@5'-GCG...CCCUA G GAACC...AGC-3'@LB@ A GACAACACAACAU@LB@ | :||||||||||||@LB@ U UUGUUGUGUUGUA@LB@3'-UUU...GUUUG G GUGUU...UCA-5'@LB@ | |@LB@ 80 38@LB@@LB@@LB@Energy -14.01 kcal/mol@LB@Hybridization Energy -18.8338 kcal/mol@LB@Unfolding Energy - mRNA 1.20586 kcal/mol@LB@Unfolding Energy - sRNA 3.77892 kcal/mol@LB@@LB@Position - mRNA 159 -- 193@LB@Position - sRNA 39 -- 79@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 70 -- 76@LB@ |
141 |
0.007251 |
0.182 |
stm2325 |
nuoE |
-19.46 |
0.021521 |
159 -- 233 |
56 -- 129 |
NADH-quinone oxidoreductase subunit E |
|
_____________158_____________________________________________________________________________234\n_____________|_______________________________________________________________________________|\n5'-AUG...UAUCU_______A___AUU____UAU___A_____________CUAAUUAU______G_________AC___A___________UUUGA...GUG-3'\n______________GGGUAGU_UCG___UUGU___GUC_GA__UGUGGACCG________GCACGA_AAU_CAACA__CAC_AACCG_AGGCU\n______________|||||||_|||___::||___|||_||__:|::||||:________:|||:|_||:_|||||__|||_|||||_|:||:\n______________CCCAUCA_AGC___GGCA___CAG_CU__GCGUCUGGU________UGUGUU_UUG_GUUGU__GUG_UUGGC_UUCGG\n3'-UUU...UUUUU_______G___GAU____C_____A__UA_________UAACGUU_______G___U_____A__________A_____UUUUC...UCA-5'\n_____________|_______________________________________________________________________________|\n_____________130_____________________________________________________________________________55\n |
159 -- 165 |
123 -- 129 |
-58.9967 kcal/mol |
15.8863 kcal/mol |
27.1281 kcal/mol |
158 234@LB@ | |@LB@5'-AUG...UAUCU A AUU UAU A CUAAUUAU G AC A UUUGA...GUG-3'@LB@ GGGUAGU UCG UUGU GUC GA UGUGGACCG GCACGA AAU CAACA CAC AACCG AGGCU@LB@ ||||||| ||| ::|| ||| || :|::||||: :|||:| ||: ||||| ||| ||||| |:||:@LB@ CCCAUCA AGC GGCA CAG CU GCGUCUGGU UGUGUU UUG GUUGU GUG UUGGC UUCGG@LB@3'-UUU...UUUUU G GAU C A UA UAACGUU G U A A UUUUC...UCA-5'@LB@ | |@LB@ 130 55@LB@@LB@@LB@Energy -19.46 kcal/mol@LB@Hybridization Energy -58.9967 kcal/mol@LB@Unfolding Energy - mRNA 15.8863 kcal/mol@LB@Unfolding Energy - sRNA 27.1281 kcal/mol@LB@@LB@Position - mRNA 159 -- 233@LB@Position - sRNA 56 -- 129@LB@Position Seed - mRNA 159 -- 165@LB@Position Seed - sRNA 123 -- 129@LB@ |