b3118 |
-30 |
-14 |
-30 |
-24 |
6.52 |
ChiX |
42 |
57 |
51 |
57 |
2.73 |
-8.84 |
-18.09 |
-0.936297 |
CCGUCAAUGAGGUAAUU&AAUUCCUCUUUGACGG |
(((((((.((((.((((&)))))))).))))))) |
AGUGGUCGCACAUAUCCUGUUCAUUUCAUUUUGAUACACUUCAUGCCGUCAAUGAGGUAAUUAACGUAGGUCGUUAUGAGCACUAUUCUUCUUCCGAAAACGCAGCACCUGGUAGUCUUUCAGGAAGUCAUUAGAAGUGGUUCUAUCGGC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.031151 |
0.8602904 |
tdcA |
947494 |
DNA-binding transcriptional activator TdcA |
b0847 |
24 |
53 |
46 |
52 |
5.92 |
ChiX |
26 |
55 |
27 |
33 |
1.18 |
-10.7 |
-17.8 |
-1.1333 |
GUUAAAUGGGAAUUACAUUCUGUUAUUAUU&AAUAAUAAAAAAAUGAAAUUCCUCUUUGAC |
((((((..((((((.((((...((((((((&))))))))...)))).))))))..)))))) |
GAAUUCUGGUAAAAAACAUUAUCGUAAAUUACCAUUUCUUUCAACAGCUUACUAGUAAACAAGAAGUUAGCCUCCGUGAAUAUAAACGUCGCCGAAUUGUUAAAUGGGAAUUACAUUCUGUUAUUAUUUGUGGUCCUCGCGCUUGGGCUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0125842 |
0.8602904 |
ybjL |
945474 |
putative transport protein YbjL |
b2545 |
-15 |
-1 |
-9 |
-3 |
4.14 |
ChiX |
41 |
55 |
43 |
49 |
0.94 |
-10 |
-15.08 |
-1.05916 |
GUUAAUGAGGGAUUU&AAAUUCCUCUUUGAC |
(((((.(((((((((&))))))))).))))) |
GAAACGCUAAACCUUAACGCCCCUGGCGCGGGUGCGGCAGGGAUGAAAAUUAAUCGUAUUGUUAAUGAGGGAUUUAUGAAAACGAUGCUGGCAGCUUAUUUACCAGGAAAUUCGACCGUCGAUCUGCGGGAAGUUGCGGUGCCGACGCCG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0176637 |
0.8602904 |
yphC |
947019 |
putative zinc-binding dehydrogenase YphC |
b1003 |
-71 |
-56 |
-64 |
-58 |
3.2 |
ChiX |
43 |
56 |
45 |
51 |
0.95 |
-9.72 |
-13.87 |
-1.0295 |
CGUUAUCAAGGGGAAU&AUUCCUCUUUGACG |
(((((..(((((((((&)))))))))))))) |
UGCUCGUUAUCAAGGGGAAUAUGUCGCAGGUCUGGCAGUUAAACUUAACGGCUAAUCUUCAACAGGAGGAUACGCAUGCCAACUCAAGAAGCGAAAGCUCAUCACGUCGGUGAAUGGGCAUCUCUGCGCAAUACGUCGCCGGAAAUAGCC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0202444 |
0.8602904 |
yccJ |
948930 |
PF13993 family protein YccJ |
b1071 |
-17 |
-6 |
-12 |
-6 |
4.12 |
ChiX |
43 |
54 |
43 |
49 |
0.94 |
-8.34 |
-13.4 |
-0.883339 |
UCAAUGAGGAAU&AUUCCUCUUUGA |
((((.(((((((&))))))).)))) |
GCUGUUAAAGAUUACCCGUCCCUUGCCGAUAAAUAAGCAACACAUGAUAAAAGCGCCCUCAAUGAGGAAUAAACCAUGAGUAUUGAUCGCACUUCGCCUCUGAAGCCUGUAAGCACCGUUCAACCGCGCGAAACCACUGACGCGCCGGUA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0398471 |
0.8602904 |
flgM |
946684 |
anti-sigma factor for FliA (sigma(28)) |
b1345 |
-62 |
-50 |
-57 |
-51 |
1.19 |
ChiX |
42 |
53 |
43 |
49 |
0.93 |
-10.35 |
-12.47 |
-1.09623 |
CAAACGAGGGAUU&AAUUCCUCUUUG |
((((.((((((((&)))))))))))) |
GUAAGCCAGACAGCAAACGAGGGAUUAUCUGGUACAACUAUCCAAAGAUAAAUCAGUUUAUCAAAGACUCAUGAUAUGUCUAAAUUACCAACAGGUGUCGAGAUUAGAGGUAGAUACAUUCGCAUCUGGUUCAUGUUUCGAGGAAAACGA |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0149041 |
0.8602904 |
intR |
946976 |
Rac prophage putative integrase |
b2448 |
-17 |
-5 |
-11 |
-5 |
2.87 |
ChiX |
45 |
57 |
45 |
51 |
2.73 |
-10.66 |
-16.26 |
-1.12906 |
CUGUGAAGGAGGA&UCCUCUUUGACGG |
((((.((((((((&)))))))).)))) |
AAUGAAACGGUGGGAAGUGGCUUUACUGGUGAUGGUAAUGUUGGUUUGCUGUAUUGAACUGUGAAGGAGGACGCCAUGAAACUUUUAAUCGCAAUCAUCCUGAUGGUGCUGACUGGUGUUUGCUUUGCAGAUGUUGGUGAUUACAGGCUG |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0128294 |
0.8602904 |
yffQ |
946927 |
CPZ-55 prophage uncharacterized protein YffQ |
b1040 |
-16 |
-2 |
-11 |
-5 |
4.15 |
ChiX |
38 |
52 |
41 |
47 |
1.06 |
-9.19 |
-14.4 |
-0.973367 |
AAAGCGGGGUUUCAU&AUGAAAUUCCUCUUU |
((((.((((((((((&)))))))))).)))) |
UGUCAGUACUUCUGGUGCUUCUAUUUUAGAGGCAGCUGUCAGGUGUGCGAUCAAUAAAAAAAGCGGGGUUUCAUCAUGUUUAAUGAAGUCCAUAGUAUUCAUGGUCAUACAUUAUUGUUGAUCACUAAAUCUUCUUUGCAGGCGACAGCU |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0262335 |
0.8602904 |
csgD |
949119 |
DNA-binding transcriptional dual regulator CsgD |
b1476 |
-49 |
-27 |
-41 |
-35 |
5.65 |
ChiX |
45 |
69 |
55 |
61 |
11.22 |
-11.4 |
-28.27 |
-1.20744 |
AUCGGUAUUGGCCCGAAUAAGGA&UCCUCUUUGACGGGCCAAUAGCGAU |
((((.((((((((((((..((((&))))..))..)))))))))).)))) |
CUUUUGCCGGGUUGAUUUUCCACUACAUCGGUAUUGGCCCGAAUAAGGAAGUGGACGAUGACGAGGAGGAUCAUCAUGAGUAAGUCGAAAAUGAUUGUGCGCACCAAAUUUAUUGAUCGCGCCUGUCACUGGACCGUGGUGAUUUGCUUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0089906 |
0.8602904 |
fdnI |
946038 |
formate dehydrogenase N subunit gamma |
b3413 |
53 |
67 |
59 |
65 |
6.52 |
ChiX |
41 |
55 |
43 |
49 |
0.94 |
-9.41 |
-16.87 |
-0.996669 |
GUCAUUGGGGGAUUU&AAAUUCCUCUUUGAC |
((((..(((((((((&)))))))))..)))) |
UUCCCCUGACCUUUGGUCUGCCACCAGAUGUUAUUCAUCCGCUAUUGUUCUCUUUUGACUUACAAGGAUGAACAUAUGCUAACAGUACCGGGAUUAUGCUGGCUAUGCCGAAUGCCACUGGCGUUAGGUCAUUGGGGGAUUUGUUCGGUC |
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUUUUUU |
0.0235542 |
0.8602904 |
yhgH |
947915 |
DNA utilization protein YhgH |