lmo0788 |
-23 |
-4 |
-11 |
-5 |
4.93 |
LhrA2 |
197 |
212 |
198 |
204 |
3.03 |
-14.54 |
-22.5 |
-1.37101 |
UGCGUAACGAAAGGGAUGAG&CUCAUCCCGUUAUGCA |
((((((((....((((((((&)))))))))))))))) |
AAGCGAAGUACAAUUAACGGAUGAUAUGUGAAAUCAUAUACAUAUUAAGUAGUGCGUAACGAAAGGGAUGAGAAAAUGAUUCAUGCAGGAUUAGAUGUAGGAUCAACAACAGCAAAGGCCGUAGCACUUAAUGACCAGGGGGAUAUUUUA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0195222 |
0.9163749 |
|
985448 |
lmo0788 |
lmo0661 |
46 |
71 |
65 |
71 |
6.26 |
LhrA2 |
156 |
186 |
156 |
162 |
3.01 |
-14.51 |
-23.78 |
-1.36818 |
GAAGUACACUCUGCCUGGAUGGAAAC&GUUUUCAUUCAUCUCAUUGGCCGUGUAGUUC |
(((.(((((...((((((((((((((&))))))))))).......))).))))).))) |
AGAAAAUAGAUAAUACGAAAACCGCCCAGUGUUUGGGCGGUUUUUUAUUAUAAUAAAAGUUAGGAGAUGAGUUCAAUGAAAGUAAGCAAAUCAUUUGAAGUAUUCGCGAAAGAAGCUCCCGAAGUACACUCUGCCUGGAUGGAAACCGUA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0198308 |
0.9163749 |
|
984999 |
|
lmo2654 |
-5 |
11 |
-2 |
5 |
0.62 |
LhrA2 |
167 |
184 |
175 |
181 |
2.5 |
-14.34 |
-17.46 |
-1.35215 |
ACAACAUGGCUAGAGA&UCUCAUUGGCCGUGUAGU |
((.(((((((((((((&))))..))))))))).)) |
UCGUUGGUAAAAAAAUCACUGACAAAUUCCAGGCGUAUUGCCUGAAAAAUUGUUUUAUGGAAGGAGAAAUACAACAUGGCUAGAGAGUUCUCCUUAGAAAAGACUCGUAAUAUUGGUAUCAUGGCCCACAUUGAUGCGGGUAAAACUACC |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0216662 |
0.9474659 |
fus |
986619 |
elongation factor G |
lmo0292 |
3 |
49 |
39 |
45 |
1.83 |
LhrA2 |
155 |
203 |
159 |
165 |
7.05 |
-14.32 |
-23.2 |
-1.35026 |
GGACGAGAAAGAAAAGAAUUUAAAUGAAAACAGCGAGAAUGAAAGCA&UGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCC |
(((.(((..(((...(((((...(((........(((((((((((((&))))))))))).))........)))..)))))...)))....))).))) |
UUUUCAUCGUUUUUUCAUAUUUGGGGUUUAUUAUGGAAGUAUAUAAAUGCGAAAUUUGCAGAGAGGAAGGAAGACAUGGACGAGAAAGAAAAGAAUUUAAAUGAAAACAGCGAGAAUGAAAGCACGCCGAAAAGAGAGGUCGAGGAUACU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0218921 |
0.9474659 |
|
987455 |
heat-shock protein htrA serine protease |
lmo0066 |
-22 |
6 |
-3 |
4 |
8.22 |
LhrA2 |
158 |
199 |
160 |
166 |
6.89 |
-14.3 |
-29.41 |
-1.34838 |
GAGGUAUAAGGAGGCCAGAUGAAUGAAA&UUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUC |
((((((((....((((((((((((((((&)))))))))))....)))))..............)))))))) |
AAACCAUGGUUGAUGCAGACAGAGAUAUUGCUGAAAAAAUUAUCGCAGCUUUAGAGGUAUAAGGAGGCCAGAUGAAUGAAAGAAGUCAACUACCGAGAAGACGACUGGCGUGAAGCCAAAAGUGCCCUCGCUCCAUUUGCCGCAGCGAAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0221203 |
0.9474659 |
|
986392 |
toxin |
lmo2106 |
-29 |
22 |
-29 |
-23 |
8.45 |
LhrA2 |
159 |
207 |
201 |
207 |
7.26 |
-14.28 |
-29.99 |
-1.34649 |
AAUGGGAACAGCAACAUAGAGGUGAAAAAAUGUCUUUAAAGAUGAAGUGGA&UUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUU |
(((((((..((...((((((..((((.....(((.....(((((((.((((&)))))))))))....))).......))))..)))))).))..))))))) |
AUAAUGAUAGGGAUAACGUUUAAAGGAUGACAAAAUAUUGAUAAUAAAUGGGAACAGCAACAUAGAGGUGAAAAAAUGUCUUUAAAGAUGAAGUGGAUUAUAGCGAUCAGUAUUAUCAUUGUACUUUUAGUCGUGGGGUGGUUUCUUGGG |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0223506 |
0.9474659 |
|
984749 |
|
lmo2445 |
-67 |
-36 |
-44 |
-38 |
1.3 |
LhrA2 |
157 |
177 |
159 |
165 |
1.89 |
-14.24 |
-17.43 |
-1.34272 |
GGCUAUAUUGAAAGGAGUGGAAUGAAUGAAAA&UUUUCAUUCAUCUCAUUGGCC |
(((((.........(((....(((((((((((&))))))))))))))..))))) |
GAAAGGGUGGCUAUAUUGAAAGGAGUGGAAUGAAUGAAAAAAAUAAUUGGACUGACGUUUGUUGCUAUUUGUUGAAUUUUAUUUGCACCAACAAUCAAAGCACAAGCAGAUACAGUUCCGUUACCAGCGCCUAUUAUAGAGGCUUUCCCG |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0228179 |
0.9474659 |
|
987394 |
internalin |
lmo0200 |
-10 |
14 |
-10 |
-4 |
4.26 |
LhrA2 |
175 |
204 |
198 |
204 |
6.62 |
-14.21 |
-25.09 |
-1.33989 |
GGGAUGAGACAUGAACGCUCAAGC&GCCGUGUAGUUCAUGUCUAUGCCUCAUCCC |
((((((((((((((((......((&))......)))))))))......))))))) |
AACAAUUGUUGUUACUGCCUAAUGUUUUUAGGGUAUUUUAAAAAAGGGCGAUAAAAAACGAUUGGGGGAUGAGACAUGAACGCUCAAGCAGAAGAAUUCAAAAAAUAUUUAGAAACUAACGGGAUAAAACCAAAACAAUUUCAUAAAAAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0231743 |
0.9474659 |
prfA |
987031 |
listeriolysin positive regulatory protein |
lmo2566 |
-22 |
16 |
-3 |
4 |
7.18 |
LhrA2 |
155 |
186 |
164 |
170 |
3.01 |
-14.16 |
-24.35 |
-1.33518 |
GAAAAUCAUGGAGGACAUAGAGAUGAAUAUAGAAAACA&UGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUC |
(((...(((((....((..(((((((((...(((((((&))))))))))))))))..)).)))))...))) |
AUUUUAAGCCAUUUGUAUCUAAUUUUGCUGUCGGUAUGCUAUAAUAACAAAAAGAAAAUCAUGGAGGACAUAGAGAUGAAUAUAGAAAACACCUUACUAAAACAAGAUGUGUGGCGUUUUAUUGAUAAUACAACGAUUAAUCCAGCUUUC |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0237797 |
0.9474659 |
|
984810 |
lmo2566 |
lmo1454 |
-29 |
16 |
10 |
16 |
7.93 |
LhrA2 |
154 |
211 |
154 |
160 |
7.93 |
-14.13 |
-29.99 |
-1.33235 |
GCAUUUUGGAAGGAGGAAUACAGGCAGUUAUGAGUGAUAAAACAA&UUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGC |
((((...(((..((((..(((((((....((((((((.(((((((&)))))))...))).)))))..))).)))).............)))).)))....)))) |
AAUGAUGGUAUUAUUACCUAAGAGAAGCCUUUUAAUAAGGUUAGCGGCAUUUUGGAAGGAGGAAUACAGGCAGUUAUGAGUGAUAAAACAAAAAACACAAAACCAGUUGCUGAACUAAGUGUUGAGCAAGUAAAAGAAGCCCUGAUAGAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.02415 |
0.9474659 |
rpoD |
984456 |
RNA polymerase sigma factor RpoD |