| 95 |
0.02474 |
0.6733 |
lmo2446 |
N/A |
-18.44 |
0.021161 |
178 -- 278 |
95 -- 188 |
glycosidase |
|
_____________177____________________279\n_____________|______________________|\n5'-UGA...AGGAA___________GC_A_______GAAAA...ACG-3'\n______________AGUGAGAUGAA__G_AGAACGA\n______________|:|||||||||__|_|:|||:|\n______________UUACUCUACUU__C_UUUUGUU\n3'-GUU...GCCGG___________A__________UAUUA...GGA-5'\n_____________|______________________|\n_____________189____________________94\n |
210 -- 216 |
154 -- 160 |
-17.9823 kcal/mol |
4.45349 kcal/mol |
0.959215 kcal/mol |
177 279@LB@ | |@LB@5'-UGA...AGGAA GC A GAAAA...ACG-3'@LB@ AGUGAGAUGAA G AGAACGA@LB@ |:||||||||| | |:|||:|@LB@ UUACUCUACUU C UUUUGUU@LB@3'-GUU...GCCGG A UAUUA...GGA-5'@LB@ | |@LB@ 189 94@LB@@LB@@LB@Energy -18.44 kcal/mol@LB@Hybridization Energy -17.9823 kcal/mol@LB@Unfolding Energy - mRNA 4.45349 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 178 -- 278@LB@Position - sRNA 95 -- 188@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 154 -- 160@LB@ |
| 103 |
0.02634 |
0.6733 |
lmo2183 |
N/A |
-17.72 |
0.029644 |
120 -- 189 |
95 -- 172 |
ferrichrome ABC transporter permease |
|
_____________119_______________190\n_____________|_________________|\n5'-AGA...UGUGU____UU___________UUAUU...UCC-3'\n______________AUGA__UGGAUGAAAAU\n______________||||__||:|||||||:\n______________UACU__ACUUACUUUUG\n3'-GUU...CCGGU____CU___________UUUAU...GGA-5'\n_____________|_________________|\n_____________173_______________94\n |
130 -- 136 |
156 -- 162 |
-14.4355 kcal/mol |
3.54286 kcal/mol |
0.922045 kcal/mol |
119 190@LB@ | |@LB@5'-AGA...UGUGU UU UUAUU...UCC-3'@LB@ AUGA UGGAUGAAAAU@LB@ |||| ||:|||||||:@LB@ UACU ACUUACUUUUG@LB@3'-GUU...CCGGU CU UUUAU...GGA-5'@LB@ | |@LB@ 173 94@LB@@LB@@LB@Energy -17.72 kcal/mol@LB@Hybridization Energy -14.4355 kcal/mol@LB@Unfolding Energy - mRNA 3.54286 kcal/mol@LB@Unfolding Energy - sRNA 0.922045 kcal/mol@LB@@LB@Position - mRNA 120 -- 189@LB@Position - sRNA 95 -- 172@LB@Position Seed - mRNA 130 -- 136@LB@Position Seed - sRNA 156 -- 162@LB@ |
| 120 |
0.03214 |
0.6968 |
lmo0368 |
N/A |
-17.05 |
0.040150 |
163 -- 213 |
95 -- 164 |
|
|
_____________162______________________________________________214\n_____________|________________________________________________|\n5'-UGC...AAUGA_____A_____AA_______AGGGA___G______G_______A____AUUUG...UUC-3'\n______________AAGCA___GUC__UGAUUAG_____GCC_AUUUUA_UGGAAGA_UGGG\n______________||:||___|||__|||:|||_____|||_|||:||_|||||||_|||:\n______________UUUGU___CAG__ACUGAUC_____CGG_UAAGAU_ACCUUCU_ACCU\n3'-GUU...ACAGA_____CUA____________AA_____________A____________AUGUG...GGA-5'\n_____________|________________________________________________|\n_____________165______________________________________________94\n |
202 -- 208 |
99 -- 105 |
-32.1999 kcal/mol |
10.9316 kcal/mol |
9.49359 kcal/mol |
162 214@LB@ | |@LB@5'-UGC...AAUGA A AA AGGGA G G A AUUUG...UUC-3'@LB@ AAGCA GUC UGAUUAG GCC AUUUUA UGGAAGA UGGG@LB@ ||:|| ||| |||:||| ||| |||:|| ||||||| |||:@LB@ UUUGU CAG ACUGAUC CGG UAAGAU ACCUUCU ACCU@LB@3'-GUU...ACAGA CUA AA A AUGUG...GGA-5'@LB@ | |@LB@ 165 94@LB@@LB@@LB@Energy -17.05 kcal/mol@LB@Hybridization Energy -32.1999 kcal/mol@LB@Unfolding Energy - mRNA 10.9316 kcal/mol@LB@Unfolding Energy - sRNA 9.49359 kcal/mol@LB@@LB@Position - mRNA 163 -- 213@LB@Position - sRNA 95 -- 164@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 99 -- 105@LB@ |
| 166 |
0.04633 |
0.7403 |
lmo1152 |
N/A |
-16.33 |
0.055198 |
97 -- 188 |
95 -- 169 |
PduB protein |
|
_____________96_______________189\n_____________|________________|\n5'-GGC...AAGUC________________AAUAA...AAG-3'\n______________AGAUGAGUGA__GCAA\n______________||||||:|||__:|||\n______________UCUACUUACU__UGUU\n3'-GUU...GUUAC__________UU____UAUUA...GGA-5'\n_____________|________________|\n_____________170______________94\n |
100 -- 106 |
160 -- 166 |
-13.7881 kcal/mol |
2.27776 kcal/mol |
0.924402 kcal/mol |
96 189@LB@ | |@LB@5'-GGC...AAGUC AAUAA...AAG-3'@LB@ AGAUGAGUGA GCAA@LB@ ||||||:||| :|||@LB@ UCUACUUACU UGUU@LB@3'-GUU...GUUAC UU UAUUA...GGA-5'@LB@ | |@LB@ 170 94@LB@@LB@@LB@Energy -16.33 kcal/mol@LB@Hybridization Energy -13.7881 kcal/mol@LB@Unfolding Energy - mRNA 2.27776 kcal/mol@LB@Unfolding Energy - sRNA 0.924402 kcal/mol@LB@@LB@Position - mRNA 97 -- 188@LB@Position - sRNA 95 -- 169@LB@Position Seed - mRNA 100 -- 106@LB@Position Seed - sRNA 160 -- 166@LB@ |
| 184 |
0.05355 |
0.7607 |
lmo2119 |
N/A |
-15.99 |
0.064071 |
3 -- 81 |
95 -- 171 |
|
|
_____________2_________________________82\n_____________|_________________________|\n_________5'-CU______U______GU__________AUUAC...CCA-3'\n______________UGGGAU_AGUGAA__GACAGAUAGU\n______________||:|||_|:||||__:|||:|||:|\n______________ACUCUA_UUACUU__UUGUUUAUUA\n3'-GUU...CGGUU______C__________________CUAAA...GGA-5'\n_____________|_________________________|\n_____________172_______________________94\n |
18 -- 24 |
152 -- 158 |
-18.6088 kcal/mol |
3.83703 kcal/mol |
5.55637 kcal/mol |
2 82@LB@ | |@LB@ 5'-CU U GU AUUAC...CCA-3'@LB@ UGGGAU AGUGAA GACAGAUAGU@LB@ ||:||| |:|||| :|||:|||:|@LB@ ACUCUA UUACUU UUGUUUAUUA@LB@3'-GUU...CGGUU C CUAAA...GGA-5'@LB@ | |@LB@ 172 94@LB@@LB@@LB@Energy -15.99 kcal/mol@LB@Hybridization Energy -18.6088 kcal/mol@LB@Unfolding Energy - mRNA 3.83703 kcal/mol@LB@Unfolding Energy - sRNA 5.55637 kcal/mol@LB@@LB@Position - mRNA 3 -- 81@LB@Position - sRNA 95 -- 171@LB@Position Seed - mRNA 18 -- 24@LB@Position Seed - sRNA 152 -- 158@LB@ |
| 193 |
0.05586 |
0.7607 |
lmo1772 |
purC |
-15.19 |
0.089756 |
256 -- 291 |
97 -- 135 |
phosphoribosylaminoimidazole-succinocarboxamide synthase |
|
_____________255_____________________________________292\n_____________|_______________________________________|\n5'-UUA...AGAAG____________U__GU______UAUAA______C____CGACA...CGC-3'\n______________AAGCAGGUGUCU_GC__GUUGCU________GGA_GAUG\n______________||:|||:|||||_:|__|||||:________|||_||||\n______________UUUGUCUACAGA_UG__CAACGG________CCU_CUAC\n3'-GUU...ACAGA____________C__AU______UAAGAUAA___U____CUAUG...GGA-5'\n_____________|_______________________________________|\n_____________136_____________________________________96\n |
261 -- 267 |
124 -- 130 |
-33.6761 kcal/mol |
9.14329 kcal/mol |
9.45249 kcal/mol |
255 292@LB@ | |@LB@5'-UUA...AGAAG U GU UAUAA C CGACA...CGC-3'@LB@ AAGCAGGUGUCU GC GUUGCU GGA GAUG@LB@ ||:|||:||||| :| |||||: ||| ||||@LB@ UUUGUCUACAGA UG CAACGG CCU CUAC@LB@3'-GUU...ACAGA C AU UAAGAUAA U CUAUG...GGA-5'@LB@ | |@LB@ 136 96@LB@@LB@@LB@Energy -15.19 kcal/mol@LB@Hybridization Energy -33.6761 kcal/mol@LB@Unfolding Energy - mRNA 9.14329 kcal/mol@LB@Unfolding Energy - sRNA 9.45249 kcal/mol@LB@@LB@Position - mRNA 256 -- 291@LB@Position - sRNA 97 -- 135@LB@Position Seed - mRNA 261 -- 267@LB@Position Seed - sRNA 124 -- 130@LB@ |
| 170 |
0.04745 |
0.7511 |
lmo2203 |
N/A |
-15.31 |
0.085499 |
133 -- 190 |
99 -- 165 |
N-acetylmuramoyl-L-alanine amidase |
|
_____________132___________________________________191\n_____________|_____________________________________|\n5'-AUA...AGGUU_________________A________AA_________ACUAA...CAG-3'\n______________AACAGA_____GAC_AG__GCCAUUU__AUUGGGGGA\n______________||||||_____|||_||__||||||:__|||||::||\n______________UUGUCU_____CUG_UC__CGGUAAG__UAACCUUCU\n3'-GUU...CAGAU______ACAGA___A__AA_______A__________ACCUA...GGA-5'\n_____________|_____________________________________|\n_____________166___________________________________98\n |
184 -- 190 |
99 -- 105 |
-25.8209 kcal/mol |
4.57897 kcal/mol |
9.42764 kcal/mol |
132 191@LB@ | |@LB@5'-AUA...AGGUU A AA ACUAA...CAG-3'@LB@ AACAGA GAC AG GCCAUUU AUUGGGGGA@LB@ |||||| ||| || ||||||: |||||::||@LB@ UUGUCU CUG UC CGGUAAG UAACCUUCU@LB@3'-GUU...CAGAU ACAGA A AA A ACCUA...GGA-5'@LB@ | |@LB@ 166 98@LB@@LB@@LB@Energy -15.31 kcal/mol@LB@Hybridization Energy -25.8209 kcal/mol@LB@Unfolding Energy - mRNA 4.57897 kcal/mol@LB@Unfolding Energy - sRNA 9.42764 kcal/mol@LB@@LB@Position - mRNA 133 -- 190@LB@Position - sRNA 99 -- 165@LB@Position Seed - mRNA 184 -- 190@LB@Position Seed - sRNA 99 -- 105@LB@ |
| 53 |
0.0118 |
0.599 |
lmo2394 |
N/A |
-15.56 |
0.076801 |
20 -- 80 |
100 -- 170 |
|
|
_____________19_____________________________________81\n_____________|______________________________________|\n5'-GGA...UUUUC________GUG___GG____________A_________AUAGU...AAA-3'\n______________GAUAGAUG___GAU________AUUUUG_UGGAGGAUG\n______________:|:|||||___||:________|||:|:_||||:||||\n______________UUGUCUAC___CUG________UAAGAU_ACCUUCUAC\n3'-GUU...CAGAU________AGA___AUCAACGG______A_________CUAUG...GGA-5'\n_____________|______________________________________|\n_____________171____________________________________99\n |
189 -- 195 |
97 -- 103 |
-26.5698 kcal/mol |
4.81204 kcal/mol |
9.44565 kcal/mol |
19 81@LB@ | |@LB@5'-GGA...UUUUC GUG GG A AUAGU...AAA-3'@LB@ GAUAGAUG GAU AUUUUG UGGAGGAUG@LB@ :|:||||| ||: |||:|: ||||:||||@LB@ UUGUCUAC CUG UAAGAU ACCUUCUAC@LB@3'-GUU...CAGAU AGA AUCAACGG A CUAUG...GGA-5'@LB@ | |@LB@ 171 99@LB@@LB@@LB@Energy -15.56 kcal/mol@LB@Hybridization Energy -26.5698 kcal/mol@LB@Unfolding Energy - mRNA 4.81204 kcal/mol@LB@Unfolding Energy - sRNA 9.44565 kcal/mol@LB@@LB@Position - mRNA 20 -- 80@LB@Position - sRNA 100 -- 170@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 97 -- 103@LB@ |
| 99 |
0.02562 |
0.6733 |
lmo2201 |
N/A |
-18.35 |
0.022079 |
190 -- 255 |
101 -- 170 |
3-oxoacyl-ACP synthase |
|
_____________189_____________________________________________________________________256\n_____________|_______________________________________________________________________|\n5'-AAC...AUAAG________________________GAAGA__A___GUU__U______G__GCU___A___C__________ACGAU...AUG-3'\n______________GAGAUGAGU__AAAUGGAUAA_GA_____GU_GUU___AC_GGUGUU_GA___GUU__CA__CUAUUGGAA\n______________|||||||:|__|||:::||||_||_____||_||:___||_|:|||:_||___|||__||__|||||||||\n______________CUCUACUUA__UUUGUUUAUU_CU_____CA_CAG___UG_CUACAG_CU___CAA__GU__GAUAACCUU\n3'-GUU...GGUUA_________CU__________A__AAAAC______AUU__U______A__GAU___CG__AA_________CUACC...GGA-5'\n_____________|_______________________________________________________________________|\n_____________171_____________________________________________________________________100\n |
249 -- 255 |
101 -- 107 |
-41.8612 kcal/mol |
11.5076 kcal/mol |
19.339 kcal/mol |
189 256@LB@ | |@LB@5'-AAC...AUAAG GAAGA A GUU U G GCU A C ACGAU...AUG-3'@LB@ GAGAUGAGU AAAUGGAUAA GA GU GUU AC GGUGUU GA GUU CA CUAUUGGAA@LB@ |||||||:| |||:::|||| || || ||: || |:|||: || ||| || |||||||||@LB@ CUCUACUUA UUUGUUUAUU CU CA CAG UG CUACAG CU CAA GU GAUAACCUU@LB@3'-GUU...GGUUA CU A AAAAC AUU U A GAU CG AA CUACC...GGA-5'@LB@ | |@LB@ 171 100@LB@@LB@@LB@Energy -18.35 kcal/mol@LB@Hybridization Energy -41.8612 kcal/mol@LB@Unfolding Energy - mRNA 11.5076 kcal/mol@LB@Unfolding Energy - sRNA 19.339 kcal/mol@LB@@LB@Position - mRNA 190 -- 255@LB@Position - sRNA 101 -- 170@LB@Position Seed - mRNA 249 -- 255@LB@Position Seed - sRNA 101 -- 107@LB@ |
| 109 |
0.02745 |
0.6733 |
lmo0843 |
N/A |
-19.30 |
0.014041 |
79 -- 127 |
106 -- 151 |
|
|
_____________78____________________________________________________128\n_____________|_____________________________________________________|\n5'-CCG...GUCCA____C_________________________AUAAUUU__U_____________CCCUG...CUG-3'\n______________AGUG_UUUUGGUG_CU_GAC_GAUGUUUGA_______CU__UUGCCAUUUUAU\n______________|:||_||||||||_||_:||_|||||:|||_______||__||||||||:|||\n______________UUAC_AAAACCAC_GA_UUG_CUACAGACU_______GA__AACGGUAAGAUA\n3'-GUU...GUUUA____U________A__U___U__________________UC____________ACCUU...GGA-5'\n_____________|_____________________________________________________|\n_____________152___________________________________________________105\n |
118 -- 124 |
109 -- 115 |
-38.6588 kcal/mol |
9.72702 kcal/mol |
18.7291 kcal/mol |
78 128@LB@ | |@LB@5'-CCG...GUCCA C AUAAUUU U CCCUG...CUG-3'@LB@ AGUG UUUUGGUG CU GAC GAUGUUUGA CU UUGCCAUUUUAU@LB@ |:|| |||||||| || :|| |||||:||| || ||||||||:|||@LB@ UUAC AAAACCAC GA UUG CUACAGACU GA AACGGUAAGAUA@LB@3'-GUU...GUUUA U A U U UC ACCUU...GGA-5'@LB@ | |@LB@ 152 105@LB@@LB@@LB@Energy -19.30 kcal/mol@LB@Hybridization Energy -38.6588 kcal/mol@LB@Unfolding Energy - mRNA 9.72702 kcal/mol@LB@Unfolding Energy - sRNA 18.7291 kcal/mol@LB@@LB@Position - mRNA 79 -- 127@LB@Position - sRNA 106 -- 151@LB@Position Seed - mRNA 118 -- 124@LB@Position Seed - sRNA 109 -- 115@LB@ |
