124 |
0.04963 |
0.3262 |
ct_290 |
ptsN_1 |
-8.82 |
0.054773 |
1 -- 15 |
18 -- 32 |
PTS fructose transporter subunit IIA |
|
______________1______________16\n______________|______________|\n___________5'-____G__________GAUGC...UUA-3'\n______________GAGG_UAUUUUGUGG\n______________||:|_||||:::|||\n______________CUUC_AUAAGGUACC\n3'-UUU...UCAGU____G__________GCAAU...GAA-5'\n_____________|_______________|\n_____________33______________17\n |
9 -- 15 |
18 -- 24 |
-16.4794 kcal/mol |
2.69105 kcal/mol |
4.96566 kcal/mol |
1 16@LB@ | |@LB@ 5'- G GAUGC...UUA-3'@LB@ GAGG UAUUUUGUGG@LB@ ||:| ||||:::|||@LB@ CUUC AUAAGGUACC@LB@3'-UUU...UCAGU G GCAAU...GAA-5'@LB@ | |@LB@ 33 17@LB@@LB@@LB@Energy -8.82 kcal/mol@LB@Hybridization Energy -16.4794 kcal/mol@LB@Unfolding Energy - mRNA 2.69105 kcal/mol@LB@Unfolding Energy - sRNA 4.96566 kcal/mol@LB@@LB@Position - mRNA 1 -- 15@LB@Position - sRNA 18 -- 32@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 18 -- 24@LB@ |
153 |
0.06453 |
0.3424 |
ct_729 |
serS |
-6.28 |
0.205305 |
1 -- 23 |
3 -- 33 |
serine--tRNA ligase |
|
______________1______________________________24\n______________|______________________________|\n___________5'-____C_G_____U__________________CCUCA...UGG-3'\n______________AGAA_C_AUUCC_UG________AUGCCAAC\n______________||||_|_|||||_||________||:|||||\n______________UCUU_G_UAAGG_AC________UAUGGUUG\n3'-UUU...CUCAG____C_A_____U__CGCAAUCU________AA-5'\n_____________|_______________________________|\n_____________34______________________________2\n |
17 -- 23 |
3 -- 9 |
-16.9997 kcal/mol |
2.1318 kcal/mol |
8.59196 kcal/mol |
1 24@LB@ | |@LB@ 5'- C G U CCUCA...UGG-3'@LB@ AGAA C AUUCC UG AUGCCAAC@LB@ |||| | ||||| || ||:|||||@LB@ UCUU G UAAGG AC UAUGGUUG@LB@3'-UUU...CUCAG C A U CGCAAUCU AA-5'@LB@ | |@LB@ 34 2@LB@@LB@@LB@Energy -6.28 kcal/mol@LB@Hybridization Energy -16.9997 kcal/mol@LB@Unfolding Energy - mRNA 2.1318 kcal/mol@LB@Unfolding Energy - sRNA 8.59196 kcal/mol@LB@@LB@Position - mRNA 1 -- 23@LB@Position - sRNA 3 -- 33@LB@Position Seed - mRNA 17 -- 23@LB@Position Seed - sRNA 3 -- 9@LB@ |
173 |
0.07335 |
0.3448 |
ct_543 |
hisS |
-6.45 |
0.189015 |
1 -- 7 |
82 -- 88 |
histidine--tRNA ligase |
|
______________1______8\n______________|______|\n___________5'-_______GUAUU...AGC-3'\n______________AUGCGGC\n______________||:||||\n______________UAUGCCG\n3'-UUU...GCCUC_______AUUGA...GAA-5'\n_____________|_______|\n_____________89______81\n |
1 -- 7 |
82 -- 88 |
-9.9342 kcal/mol |
2.38776 kcal/mol |
1.09753 kcal/mol |
1 8@LB@ | |@LB@ 5'- GUAUU...AGC-3'@LB@ AUGCGGC@LB@ ||:||||@LB@ UAUGCCG@LB@3'-UUU...GCCUC AUUGA...GAA-5'@LB@ | |@LB@ 89 81@LB@@LB@@LB@Energy -6.45 kcal/mol@LB@Hybridization Energy -9.9342 kcal/mol@LB@Unfolding Energy - mRNA 2.38776 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 1 -- 7@LB@Position - sRNA 82 -- 88@LB@Position Seed - mRNA 1 -- 7@LB@Position Seed - sRNA 82 -- 88@LB@ |
111 |
0.04436 |
0.3262 |
ct_405 |
ribC |
-3.97 |
0.532190 |
3 -- 10 |
49 -- 56 |
riboflavin synthase |
|
_____________2________11\n_____________|________|\n_________5'-AA________CUUGU...AUG-3'\n______________UCCUGUGU\n______________:|||||||\n______________GGGACACA\n3'-UUU...AAGGG________UGUUU...GAA-5'\n_____________|________|\n_____________57_______48\n |
4 -- 10 |
49 -- 55 |
-11.4476 kcal/mol |
0.227857 kcal/mol |
7.24525 kcal/mol |
2 11@LB@ | |@LB@ 5'-AA CUUGU...AUG-3'@LB@ UCCUGUGU@LB@ :|||||||@LB@ GGGACACA@LB@3'-UUU...AAGGG UGUUU...GAA-5'@LB@ | |@LB@ 57 48@LB@@LB@@LB@Energy -3.97 kcal/mol@LB@Hybridization Energy -11.4476 kcal/mol@LB@Unfolding Energy - mRNA 0.227857 kcal/mol@LB@Unfolding Energy - sRNA 7.24525 kcal/mol@LB@@LB@Position - mRNA 3 -- 10@LB@Position - sRNA 49 -- 56@LB@Position Seed - mRNA 4 -- 10@LB@Position Seed - sRNA 49 -- 55@LB@ |
45 |
0.01671 |
0.29 |
ct_469 |
N/A |
-9.81 |
0.031394 |
4 -- 20 |
17 -- 35 |
|
|
_____________3___________________21\n_____________|___________________|\n________5'-AUU___________________AACCU...UCU-3'\n______________UCAGAAGCU_UUUC_UGGU\n______________|||||||||_||:|_|||:\n______________AGUCUUCGA_AAGG_ACCG\n3'-UUU...AUCUC_________U____U____CAAUC...GAA-5'\n_____________|___________________|\n_____________36__________________16\n |
6 -- 12 |
27 -- 33 |
-19.4129 kcal/mol |
4.62874 kcal/mol |
4.9781 kcal/mol |
3 21@LB@ | |@LB@ 5'-AUU AACCU...UCU-3'@LB@ UCAGAAGCU UUUC UGGU@LB@ ||||||||| ||:| |||:@LB@ AGUCUUCGA AAGG ACCG@LB@3'-UUU...AUCUC U U CAAUC...GAA-5'@LB@ | |@LB@ 36 16@LB@@LB@@LB@Energy -9.81 kcal/mol@LB@Hybridization Energy -19.4129 kcal/mol@LB@Unfolding Energy - mRNA 4.62874 kcal/mol@LB@Unfolding Energy - sRNA 4.9781 kcal/mol@LB@@LB@Position - mRNA 4 -- 20@LB@Position - sRNA 17 -- 35@LB@Position Seed - mRNA 6 -- 12@LB@Position Seed - sRNA 27 -- 33@LB@ |
58 |
0.02303 |
0.29 |
ct_184 |
N/A |
-4.35 |
0.465673 |
5 -- 18 |
18 -- 35 |
Holliday junction resolvase |
|
_____________4__________________19\n_____________|__________________|\n_______5'-ACGU_______AA_________AUUAA...UGC-3'\n______________UUAGAAG______CAUGG\n______________|:|||||______|||||\n______________AGUCUUC______GUACC\n3'-UUU...AUCUC_______GAUAAG_____GCAAU...GAA-5'\n_____________|__________________|\n_____________36_________________17\n |
5 -- 11 |
29 -- 35 |
-12.193 kcal/mol |
2.86148 kcal/mol |
4.97803 kcal/mol |
4 19@LB@ | |@LB@ 5'-ACGU AA AUUAA...UGC-3'@LB@ UUAGAAG CAUGG@LB@ |:||||| |||||@LB@ AGUCUUC GUACC@LB@3'-UUU...AUCUC GAUAAG GCAAU...GAA-5'@LB@ | |@LB@ 36 17@LB@@LB@@LB@Energy -4.35 kcal/mol@LB@Hybridization Energy -12.193 kcal/mol@LB@Unfolding Energy - mRNA 2.86148 kcal/mol@LB@Unfolding Energy - sRNA 4.97803 kcal/mol@LB@@LB@Position - mRNA 5 -- 18@LB@Position - sRNA 18 -- 35@LB@Position Seed - mRNA 5 -- 11@LB@Position Seed - sRNA 29 -- 35@LB@ |
158 |
0.06677 |
0.3424 |
ct_770 |
fabF |
-2.81 |
0.742017 |
6 -- 13 |
26 -- 33 |
3-oxoacyl-ACP synthase |
|
_____________5________14\n_____________|________|\n______5'-UAUAG________AAAAA...GUG-3'\n______________AGGAGUUA\n______________||:||:||\n______________UCUUCGAU\n3'-UUU...CUCAG________AAGGU...GAA-5'\n_____________|________|\n_____________34_______25\n |
7 -- 13 |
26 -- 32 |
-8.27201 kcal/mol |
0.759487 kcal/mol |
4.69868 kcal/mol |
5 14@LB@ | |@LB@ 5'-UAUAG AAAAA...GUG-3'@LB@ AGGAGUUA@LB@ ||:||:||@LB@ UCUUCGAU@LB@3'-UUU...CUCAG AAGGU...GAA-5'@LB@ | |@LB@ 34 25@LB@@LB@@LB@Energy -2.81 kcal/mol@LB@Hybridization Energy -8.27201 kcal/mol@LB@Unfolding Energy - mRNA 0.759487 kcal/mol@LB@Unfolding Energy - sRNA 4.69868 kcal/mol@LB@@LB@Position - mRNA 6 -- 13@LB@Position - sRNA 26 -- 33@LB@Position Seed - mRNA 7 -- 13@LB@Position Seed - sRNA 26 -- 32@LB@ |
120 |
0.04883 |
0.3262 |
ct_827 |
nrdA |
-5.19 |
0.334730 |
7 -- 13 |
82 -- 88 |
ribonucleoside-diphosphate reductase subunit alpha |
|
_____________6_______14\n_____________|_______|\n_____5'-UUCUAU_______AUACA...CUU-3'\n______________AUAUGGU\n______________|||:||:\n______________UAUGCCG\n3'-UUU...GCCUC_______AUUGA...GAA-5'\n_____________|_______|\n_____________89______81\n |
7 -- 13 |
82 -- 88 |
-6.89581 kcal/mol |
0.608866 kcal/mol |
1.09753 kcal/mol |
6 14@LB@ | |@LB@ 5'-UUCUAU AUACA...CUU-3'@LB@ AUAUGGU@LB@ |||:||:@LB@ UAUGCCG@LB@3'-UUU...GCCUC AUUGA...GAA-5'@LB@ | |@LB@ 89 81@LB@@LB@@LB@Energy -5.19 kcal/mol@LB@Hybridization Energy -6.89581 kcal/mol@LB@Unfolding Energy - mRNA 0.608866 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 7 -- 13@LB@Position - sRNA 82 -- 88@LB@Position Seed - mRNA 7 -- 13@LB@Position Seed - sRNA 82 -- 88@LB@ |
177 |
0.07605 |
0.3532 |
ct_428 |
ubiE |
-3.67 |
0.587989 |
9 -- 17 |
20 -- 28 |
demethylmenaquinone methyltransferase |
|
_____________8_________18\n_____________|_________|\n___5'-UUCUUCAA_________UUCAG...AUA-3'\n______________CUAUUUCAU\n______________|||||:|||\n______________GAUAAGGUA\n3'-UUU...UCUUC_________CCGCA...GAA-5'\n_____________|_________|\n_____________29________19\n |
10 -- 16 |
21 -- 27 |
-8.26525 kcal/mol |
0.050804 kcal/mol |
4.54807 kcal/mol |
8 18@LB@ | |@LB@ 5'-UUCUUCAA UUCAG...AUA-3'@LB@ CUAUUUCAU@LB@ |||||:|||@LB@ GAUAAGGUA@LB@3'-UUU...UCUUC CCGCA...GAA-5'@LB@ | |@LB@ 29 19@LB@@LB@@LB@Energy -3.67 kcal/mol@LB@Hybridization Energy -8.26525 kcal/mol@LB@Unfolding Energy - mRNA 0.050804 kcal/mol@LB@Unfolding Energy - sRNA 4.54807 kcal/mol@LB@@LB@Position - mRNA 9 -- 17@LB@Position - sRNA 20 -- 28@LB@Position Seed - mRNA 10 -- 16@LB@Position Seed - sRNA 21 -- 27@LB@ |
164 |
0.06834 |
0.3424 |
ct_716 |
N/A |
-9.26 |
0.042990 |
10 -- 57 |
2 -- 60 |
|
|
_____________9____________________________________________________________58\n_____________|____________________________________________________________|\n5'-UCA...GAGCU________UACU_____GC_________U_________GAUAUCAU______________AGGAG...UAG-3'\n______________UCUCUCCU_____CAAA__CUA___UCA_GAAGCUAUU________________CCAACU\n______________||:|:|||_____||||__|||___|||_|||||||||________________||||||\n______________AGGGGGGA_____GUUU__GAU___AGU_CUUCGAUAA________________GGUUGA\n3'-UUU...ACUGA________CACAU____GU___CUC_____________GGUACCGCAAUCUUAU______A-5'\n_____________|____________________________________________________________|\n_____________61___________________________________________________________1\n |
37 -- 43 |
24 -- 30 |
-32.8059 kcal/mol |
5.03112 kcal/mol |
18.5194 kcal/mol |
9 58@LB@ | |@LB@5'-UCA...GAGCU UACU GC U GAUAUCAU AGGAG...UAG-3'@LB@ UCUCUCCU CAAA CUA UCA GAAGCUAUU CCAACU@LB@ ||:|:||| |||| ||| ||| ||||||||| ||||||@LB@ AGGGGGGA GUUU GAU AGU CUUCGAUAA GGUUGA@LB@3'-UUU...ACUGA CACAU GU CUC GGUACCGCAAUCUUAU A-5'@LB@ | |@LB@ 61 1@LB@@LB@@LB@Energy -9.26 kcal/mol@LB@Hybridization Energy -32.8059 kcal/mol@LB@Unfolding Energy - mRNA 5.03112 kcal/mol@LB@Unfolding Energy - sRNA 18.5194 kcal/mol@LB@@LB@Position - mRNA 10 -- 57@LB@Position - sRNA 2 -- 60@LB@Position Seed - mRNA 37 -- 43@LB@Position Seed - sRNA 24 -- 30@LB@ |