157 |
0.0414 |
0.7058 |
lmo0010 |
N/A |
-15.41 |
0.081879 |
188 -- 219 |
167 -- 203 |
mevalonate kinase |
|
_____________187_____220\n_____________|_______|\n5'-AUC...AUGCG_______UGCAG...UAG-3'\n______________GAGAACA\n______________||:||||\n______________CUUUUGU\n3'-GUU...ACUUA_______UUAUU...GGA-5'\n_____________|_______|\n_____________204_____166\n |
241 -- 247 |
155 -- 161 |
-5.76961 kcal/mol |
0.621388 kcal/mol |
0.528569 kcal/mol |
187 220@LB@ | |@LB@5'-AUC...AUGCG UGCAG...UAG-3'@LB@ GAGAACA@LB@ ||:||||@LB@ CUUUUGU@LB@3'-GUU...ACUUA UUAUU...GGA-5'@LB@ | |@LB@ 204 166@LB@@LB@@LB@Energy -15.41 kcal/mol@LB@Hybridization Energy -5.76961 kcal/mol@LB@Unfolding Energy - mRNA 0.621388 kcal/mol@LB@Unfolding Energy - sRNA 0.528569 kcal/mol@LB@@LB@Position - mRNA 188 -- 219@LB@Position - sRNA 167 -- 203@LB@Position Seed - mRNA 241 -- 247@LB@Position Seed - sRNA 155 -- 161@LB@ |
69 |
0.01791 |
0.6733 |
lmo0011 |
N/A |
-18.87 |
0.017267 |
48 -- 93 |
161 -- 209 |
mevalonate diphosphate decarboxylase |
|
_____________47_________94\n_____________|__________|\n5'-AGU...CGGUA__________CAUUA...CCU-3'\n______________GAGGUGGAUG\n______________|||:||:|||\n______________CUCUACUUAC\n3'-GUU...GGUUA__________UUUUG...GGA-5'\n_____________|__________|\n_____________210________160\n |
87 -- 93 |
161 -- 167 |
-12.2828 kcal/mol |
3.75931 kcal/mol |
0.812237 kcal/mol |
47 94@LB@ | |@LB@5'-AGU...CGGUA CAUUA...CCU-3'@LB@ GAGGUGGAUG@LB@ |||:||:|||@LB@ CUCUACUUAC@LB@3'-GUU...GGUUA UUUUG...GGA-5'@LB@ | |@LB@ 210 160@LB@@LB@@LB@Energy -18.87 kcal/mol@LB@Hybridization Energy -12.2828 kcal/mol@LB@Unfolding Energy - mRNA 3.75931 kcal/mol@LB@Unfolding Energy - sRNA 0.812237 kcal/mol@LB@@LB@Position - mRNA 48 -- 93@LB@Position - sRNA 161 -- 209@LB@Position Seed - mRNA 87 -- 93@LB@Position Seed - sRNA 161 -- 167@LB@ |
29 |
0.005638 |
0.5232 |
lmo0014 |
qoxB |
-19.61 |
0.012062 |
164 -- 215 |
168 -- 211 |
AA3-600 quinol oxidase subunit I |
|
_____________163____________216\n_____________|______________|\n5'-CGG...CGCGA_____A________AAAUG...CUU-3'\n______________AGAUG_AAUGAAGA\n______________|||||_||||||:|\n______________UCUAC_UUACUUUU\n3'-GUU...GUUAC______________GUUUA...GGA-5'\n_____________|______________|\n_____________212____________167\n |
111 -- 117 |
157 -- 163 |
-11.9482 kcal/mol |
0.56531 kcal/mol |
0.884237 kcal/mol |
163 216@LB@ | |@LB@5'-CGG...CGCGA A AAAUG...CUU-3'@LB@ AGAUG AAUGAAGA@LB@ ||||| ||||||:|@LB@ UCUAC UUACUUUU@LB@3'-GUU...GUUAC GUUUA...GGA-5'@LB@ | |@LB@ 212 167@LB@@LB@@LB@Energy -19.61 kcal/mol@LB@Hybridization Energy -11.9482 kcal/mol@LB@Unfolding Energy - mRNA 0.56531 kcal/mol@LB@Unfolding Energy - sRNA 0.884237 kcal/mol@LB@@LB@Position - mRNA 164 -- 215@LB@Position - sRNA 168 -- 211@LB@Position Seed - mRNA 111 -- 117@LB@Position Seed - sRNA 157 -- 163@LB@ |
44 |
0.01013 |
0.599 |
lmo0022 |
N/A |
-16.20 |
0.058356 |
176 -- 261 |
150 -- 213 |
PTS fructose transporter subunit IIB |
|
_____________175________________262\n_____________|__________________|\n5'-CCG...GUGAU_______A___A______UGAUG...UCA-3'\n______________GAUGGGG_GGA_GAGGAC\n______________:|||:|:_|:|_||::||\n______________UUACUCU_CUU_CUUUUG\n3'-GUU...GCCGG_______A___A______UUUAU...GGA-5'\n_____________|__________________|\n_____________214________________149\n |
181 -- 187 |
167 -- 173 |
-14.383 kcal/mol |
2.57794 kcal/mol |
0.941471 kcal/mol |
175 262@LB@ | |@LB@5'-CCG...GUGAU A A UGAUG...UCA-3'@LB@ GAUGGGG GGA GAGGAC@LB@ :|||:|: |:| ||::||@LB@ UUACUCU CUU CUUUUG@LB@3'-GUU...GCCGG A A UUUAU...GGA-5'@LB@ | |@LB@ 214 149@LB@@LB@@LB@Energy -16.20 kcal/mol@LB@Hybridization Energy -14.383 kcal/mol@LB@Unfolding Energy - mRNA 2.57794 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 176 -- 261@LB@Position - sRNA 150 -- 213@LB@Position Seed - mRNA 181 -- 187@LB@Position Seed - sRNA 167 -- 173@LB@ |
65 |
0.01641 |
0.6733 |
lmo0040 |
N/A |
-17.01 |
0.040772 |
52 -- 100 |
171 -- 220 |
agmatine deiminase |
|
_____________51______________101\n_____________|_______________|\n5'-GUC...AAUAG____A__________GGGAC...CUG-3'\n______________GAGG_GAAUGAGGAU\n______________|||:_||||||::|:\n______________CUCU_CUUACUUUUG\n3'-GUU...GGUUA____A__________UUUAU...GGA-5'\n_____________|_______________|\n_____________221_____________170\n |
196 -- 202 |
156 -- 162 |
-15.5399 kcal/mol |
0.994344 kcal/mol |
0.916023 kcal/mol |
51 101@LB@ | |@LB@5'-GUC...AAUAG A GGGAC...CUG-3'@LB@ GAGG GAAUGAGGAU@LB@ |||: ||||||::|:@LB@ CUCU CUUACUUUUG@LB@3'-GUU...GGUUA A UUUAU...GGA-5'@LB@ | |@LB@ 221 170@LB@@LB@@LB@Energy -17.01 kcal/mol@LB@Hybridization Energy -15.5399 kcal/mol@LB@Unfolding Energy - mRNA 0.994344 kcal/mol@LB@Unfolding Energy - sRNA 0.916023 kcal/mol@LB@@LB@Position - mRNA 52 -- 100@LB@Position - sRNA 171 -- 220@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 156 -- 162@LB@ |
110 |
0.02752 |
0.6733 |
lmo0057 |
N/A |
-17.32 |
0.035592 |
178 -- 213 |
150 -- 185 |
|
|
_____________177_________________214\n_____________|___________________|\n5'-AAA...GCGGG_______CA__________AAGUA...AAG-3'\n______________AGUGGGA__UGAAUGAAGA\n______________|:||:||__||||||||:|\n______________UUACUCU__ACUUACUUUU\n3'-GUU...GCCGG___________________GUUUA...GGA-5'\n_____________|___________________|\n_____________186_________________149\n |
201 -- 207 |
157 -- 163 |
-16.939 kcal/mol |
2.5385 kcal/mol |
0.930085 kcal/mol |
177 214@LB@ | |@LB@5'-AAA...GCGGG CA AAGUA...AAG-3'@LB@ AGUGGGA UGAAUGAAGA@LB@ |:||:|| ||||||||:|@LB@ UUACUCU ACUUACUUUU@LB@3'-GUU...GCCGG GUUUA...GGA-5'@LB@ | |@LB@ 186 149@LB@@LB@@LB@Energy -17.32 kcal/mol@LB@Hybridization Energy -16.939 kcal/mol@LB@Unfolding Energy - mRNA 2.5385 kcal/mol@LB@Unfolding Energy - sRNA 0.930085 kcal/mol@LB@@LB@Position - mRNA 178 -- 213@LB@Position - sRNA 150 -- 185@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |
115 |
0.03087 |
0.6968 |
lmo0059 |
N/A |
-17.38 |
0.034592 |
142 -- 189 |
155 -- 211 |
|
|
_____________141_______________________________________________190\n_____________|_________________________________________________|\n5'-AAG...UUAGC____G_____UU___U________________UUUU_____A_______GGGAG...CAU-3'\n______________AGGC__GGAU__AUG_GGCUGCGCG__CAAUG____UGAAU_GAAAGCG\n______________||||__:||:__|||_::||:|:||__|||||____|||||_||||:|:\n______________UCCG__UCUG__UAC_UUGAUGUGC__GUUAC____ACUUA_CUUUUGU\n3'-GUU...CCUAC____UA___________________CG_____UCU______________UUAUU...GGA-5'\n_____________|_________________________________________________|\n_____________212_______________________________________________154\n |
183 -- 189 |
155 -- 161 |
-35.3318 kcal/mol |
12.9952 kcal/mol |
13.976 kcal/mol |
141 190@LB@ | |@LB@5'-AAG...UUAGC G UU U UUUU A GGGAG...CAU-3'@LB@ AGGC GGAU AUG GGCUGCGCG CAAUG UGAAU GAAAGCG@LB@ |||| :||: ||| ::||:|:|| ||||| ||||| ||||:|:@LB@ UCCG UCUG UAC UUGAUGUGC GUUAC ACUUA CUUUUGU@LB@3'-GUU...CCUAC UA CG UCU UUAUU...GGA-5'@LB@ | |@LB@ 212 154@LB@@LB@@LB@Energy -17.38 kcal/mol@LB@Hybridization Energy -35.3318 kcal/mol@LB@Unfolding Energy - mRNA 12.9952 kcal/mol@LB@Unfolding Energy - sRNA 13.976 kcal/mol@LB@@LB@Position - mRNA 142 -- 189@LB@Position - sRNA 155 -- 211@LB@Position Seed - mRNA 183 -- 189@LB@Position Seed - sRNA 155 -- 161@LB@ |
54 |
0.01218 |
0.6043 |
lmo0065 |
N/A |
-17.22 |
0.037093 |
77 -- 100 |
146 -- 171 |
lmo0065 |
|
_____________76_________________________101\n_____________|__________________________|\n5'-GUA...GCAUU____________________U_____UGGUA...CUA-3'\n______________UGAGAUG___GAAGACAAAU_AAUGA\n______________|||||||___|||:||||||_|||||\n______________ACUCUAC___CUUUUGUUUA_UUACU\n3'-GUU...CGGUU_______UUA________________AAAAC...GGA-5'\n_____________|__________________________|\n_____________172________________________145\n |
87 -- 93 |
152 -- 158 |
-20.9762 kcal/mol |
2.94176 kcal/mol |
5.93625 kcal/mol |
76 101@LB@ | |@LB@5'-GUA...GCAUU U UGGUA...CUA-3'@LB@ UGAGAUG GAAGACAAAU AAUGA@LB@ ||||||| |||:|||||| |||||@LB@ ACUCUAC CUUUUGUUUA UUACU@LB@3'-GUU...CGGUU UUA AAAAC...GGA-5'@LB@ | |@LB@ 172 145@LB@@LB@@LB@Energy -17.22 kcal/mol@LB@Hybridization Energy -20.9762 kcal/mol@LB@Unfolding Energy - mRNA 2.94176 kcal/mol@LB@Unfolding Energy - sRNA 5.93625 kcal/mol@LB@@LB@Position - mRNA 77 -- 100@LB@Position - sRNA 146 -- 171@LB@Position Seed - mRNA 87 -- 93@LB@Position Seed - sRNA 152 -- 158@LB@ |
45 |
0.0103 |
0.599 |
lmo0066 |
N/A |
-17.00 |
0.040990 |
179 -- 207 |
157 -- 199 |
toxin |
|
_____________178___________208\n_____________|_____________|\n5'-AAA...AGGCC_____________AAGUC...AUU-3'\n______________AGAUGAAUGAAAG\n______________||||||||||||:\n______________UCUACUUACUUUU\n3'-GUU...GUUAC_____________GUUUA...GGA-5'\n_____________|_____________|\n_____________200___________156\n |
201 -- 207 |
157 -- 163 |
-14.7839 kcal/mol |
1.76886 kcal/mol |
0.884237 kcal/mol |
178 208@LB@ | |@LB@5'-AAA...AGGCC AAGUC...AUU-3'@LB@ AGAUGAAUGAAAG@LB@ ||||||||||||:@LB@ UCUACUUACUUUU@LB@3'-GUU...GUUAC GUUUA...GGA-5'@LB@ | |@LB@ 200 156@LB@@LB@@LB@Energy -17.00 kcal/mol@LB@Hybridization Energy -14.7839 kcal/mol@LB@Unfolding Energy - mRNA 1.76886 kcal/mol@LB@Unfolding Energy - sRNA 0.884237 kcal/mol@LB@@LB@Position - mRNA 179 -- 207@LB@Position - sRNA 157 -- 199@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |
117 |
0.03157 |
0.6968 |
lmo0079 |
N/A |
-15.68 |
0.073126 |
244 -- 277 |
156 -- 185 |
lmo0079 |
|
_____________243________________________________278\n_____________|__________________________________|\n5'-UCG...AUACC_________CAA_______ACCAG___G______UAUCC...CCG-3'\n______________AGCUACGUG___CCAAUGA_____GAA_GAAAAC\n______________|:||||::|___|||||||_____|||_||||||\n______________UUGAUGUGC___GGUUACU_____CUU_CUUUUG\n3'-GUU...UGUAC_________C_________CUA_____A______UUUAU...GGA-5'\n_____________|__________________________________|\n_____________186________________________________155\n |
256 -- 262 |
169 -- 175 |
-22.638 kcal/mol |
3.99376 kcal/mol |
9.64492 kcal/mol |
243 278@LB@ | |@LB@5'-UCG...AUACC CAA ACCAG G UAUCC...CCG-3'@LB@ AGCUACGUG CCAAUGA GAA GAAAAC@LB@ |:||||::| ||||||| ||| ||||||@LB@ UUGAUGUGC GGUUACU CUU CUUUUG@LB@3'-GUU...UGUAC C CUA A UUUAU...GGA-5'@LB@ | |@LB@ 186 155@LB@@LB@@LB@Energy -15.68 kcal/mol@LB@Hybridization Energy -22.638 kcal/mol@LB@Unfolding Energy - mRNA 3.99376 kcal/mol@LB@Unfolding Energy - sRNA 9.64492 kcal/mol@LB@@LB@Position - mRNA 244 -- 277@LB@Position - sRNA 156 -- 185@LB@Position Seed - mRNA 256 -- 262@LB@Position Seed - sRNA 169 -- 175@LB@ |