| 178 |
0.009929 |
0.1875 |
b1278 |
pgpB |
-11.49 |
0.084643 |
145 -- 171 |
10 -- 41 |
phosphatidylglycerophosphatase B |
|
_____________144______________________________172\n_____________|________________________________|\n5'-GUU...AAUUU_______AA_____________CA________AUUGU...AAC-3'\n______________UUCCUGG_____CUGGCGUUUU____GUUAUG\n______________|||||||_____||:||:||||____||||||\n______________AAGGACC_____GAUCGUAAAA____CAAUAC\n3'-UUU...CCACC_______AUGUC__________UACC______AAAAA...UCG-5'\n_____________|________________________________|\n_____________42_______________________________9\n |
157 -- 163 |
20 -- 26 |
-25.137 kcal/mol |
9.03979 kcal/mol |
4.60294 kcal/mol |
144 172@LB@ | |@LB@5'-GUU...AAUUU AA CA AUUGU...AAC-3'@LB@ UUCCUGG CUGGCGUUUU GUUAUG@LB@ ||||||| ||:||:|||| ||||||@LB@ AAGGACC GAUCGUAAAA CAAUAC@LB@3'-UUU...CCACC AUGUC UACC AAAAA...UCG-5'@LB@ | |@LB@ 42 9@LB@@LB@@LB@Energy -11.49 kcal/mol@LB@Hybridization Energy -25.137 kcal/mol@LB@Unfolding Energy - mRNA 9.03979 kcal/mol@LB@Unfolding Energy - sRNA 4.60294 kcal/mol@LB@@LB@Position - mRNA 145 -- 171@LB@Position - sRNA 10 -- 41@LB@Position Seed - mRNA 157 -- 163@LB@Position Seed - sRNA 20 -- 26@LB@ |
| 29 |
0.0004753 |
0.05348 |
b3412 |
bioH |
-14.38 |
0.016792 |
146 -- 163 |
23 -- 40 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________145________________164\n_____________|__________________|\n5'-GGC...CAUAA___C_____U________AUGUU...ACG-3'\n______________UCC_GGUAC_GUUAGCAU\n______________|||_|||||_|:||||||\n______________AGG_CCAUG_CGAUCGUA\n3'-UUU...CACCA___A_____U________AAAUA...UCG-5'\n_____________|__________________|\n_____________41_________________22\n |
157 -- 163 |
23 -- 29 |
-23.5076 kcal/mol |
4.57199 kcal/mol |
4.55554 kcal/mol |
145 164@LB@ | |@LB@5'-GGC...CAUAA C U AUGUU...ACG-3'@LB@ UCC GGUAC GUUAGCAU@LB@ ||| ||||| |:||||||@LB@ AGG CCAUG CGAUCGUA@LB@3'-UUU...CACCA A U AAAUA...UCG-5'@LB@ | |@LB@ 41 22@LB@@LB@@LB@Energy -14.38 kcal/mol@LB@Hybridization Energy -23.5076 kcal/mol@LB@Unfolding Energy - mRNA 4.57199 kcal/mol@LB@Unfolding Energy - sRNA 4.55554 kcal/mol@LB@@LB@Position - mRNA 146 -- 163@LB@Position - sRNA 23 -- 40@LB@Position Seed - mRNA 157 -- 163@LB@Position Seed - sRNA 23 -- 29@LB@ |
| 98 |
0.003416 |
0.1172 |
b2024 |
hisA |
-13.42 |
0.030138 |
147 -- 168 |
25 -- 49 |
N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase |
|
_____________146_______________________169\n_____________|_________________________|\n5'-CAG...CACCC____C_____________C______GCUAA...CGC-3'\n______________GGAG___GUU_CUGGUGC_GCUGGU\n______________||||___|||_|||||:|_|||:|:\n______________CCUC___CAA_GACCAUG_CGAUCG\n3'-UUU...CGAUU____CAC___G_______U______UAAAA...UCG-5'\n_____________|_________________________|\n_____________50________________________24\n |
155 -- 161 |
32 -- 38 |
-27.4512 kcal/mol |
9.47045 kcal/mol |
4.5577 kcal/mol |
146 169@LB@ | |@LB@5'-CAG...CACCC C C GCUAA...CGC-3'@LB@ GGAG GUU CUGGUGC GCUGGU@LB@ |||| ||| |||||:| |||:|:@LB@ CCUC CAA GACCAUG CGAUCG@LB@3'-UUU...CGAUU CAC G U UAAAA...UCG-5'@LB@ | |@LB@ 50 24@LB@@LB@@LB@Energy -13.42 kcal/mol@LB@Hybridization Energy -27.4512 kcal/mol@LB@Unfolding Energy - mRNA 9.47045 kcal/mol@LB@Unfolding Energy - sRNA 4.5577 kcal/mol@LB@@LB@Position - mRNA 147 -- 168@LB@Position - sRNA 25 -- 49@LB@Position Seed - mRNA 155 -- 161@LB@Position Seed - sRNA 32 -- 38@LB@ |
| 147 |
0.006963 |
0.1592 |
b0723 |
sdhA |
-11.23 |
0.096056 |
156 -- 186 |
10 -- 46 |
succinate dehydrogenase flavoprotein subunit |
|
_____________155_______________________________________187\n_____________|_________________________________________|\n5'-GGU...GCACU________AC_____________A_______AUUC______GUGUG...GUG-3'\n______________GGUGGUUU____________GUG_UUUAUGG____GUUGUG\n______________|||||||:____________|::_|||||||____|||:||\n______________CCACCAAG____________CGU_AAAUACC____CAAUAC\n3'-UUU...UUCCU________GACCAUGUCGAU___A_________________AAAAA...UCG-5'\n_____________|_________________________________________|\n_____________47________________________________________9\n |
170 -- 176 |
16 -- 22 |
-22.0315 kcal/mol |
6.19365 kcal/mol |
4.60552 kcal/mol |
155 187@LB@ | |@LB@5'-GGU...GCACU AC A AUUC GUGUG...GUG-3'@LB@ GGUGGUUU GUG UUUAUGG GUUGUG@LB@ |||||||: |:: ||||||| |||:||@LB@ CCACCAAG CGU AAAUACC CAAUAC@LB@3'-UUU...UUCCU GACCAUGUCGAU A AAAAA...UCG-5'@LB@ | |@LB@ 47 9@LB@@LB@@LB@Energy -11.23 kcal/mol@LB@Hybridization Energy -22.0315 kcal/mol@LB@Unfolding Energy - mRNA 6.19365 kcal/mol@LB@Unfolding Energy - sRNA 4.60552 kcal/mol@LB@@LB@Position - mRNA 156 -- 186@LB@Position - sRNA 10 -- 46@LB@Position Seed - mRNA 170 -- 176@LB@Position Seed - sRNA 16 -- 22@LB@ |
| 115 |
0.004814 |
0.1404 |
b2743 |
pcm |
-10.63 |
0.126788 |
157 -- 183 |
29 -- 48 |
L-isoaspartate protein carboxylmethyltransferase type II |
|
_____________156_________________________184\n_____________|___________________________|\n5'-AUC...CGCAA__U_______CAGA_____UAA_____GUGGG...AAA-3'\n______________GA_GUGGUUU____CUGGU___ACAGC\n______________||_||||||:____|||||___|||||\n______________CU_CACCAAG____GACCA___UGUCG\n3'-UUU...GAUUC__C________________________AUCGU...UCG-5'\n_____________|___________________________|\n_____________49__________________________28\n |
160 -- 166 |
39 -- 45 |
-22.1612 kcal/mol |
7.2267 kcal/mol |
4.30129 kcal/mol |
156 184@LB@ | |@LB@5'-AUC...CGCAA U CAGA UAA GUGGG...AAA-3'@LB@ GA GUGGUUU CUGGU ACAGC@LB@ || ||||||: ||||| |||||@LB@ CU CACCAAG GACCA UGUCG@LB@3'-UUU...GAUUC C AUCGU...UCG-5'@LB@ | |@LB@ 49 28@LB@@LB@@LB@Energy -10.63 kcal/mol@LB@Hybridization Energy -22.1612 kcal/mol@LB@Unfolding Energy - mRNA 7.2267 kcal/mol@LB@Unfolding Energy - sRNA 4.30129 kcal/mol@LB@@LB@Position - mRNA 157 -- 183@LB@Position - sRNA 29 -- 48@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 39 -- 45@LB@ |
| 122 |
0.005134 |
0.1413 |
b0437 |
clpP |
-11.97 |
0.066798 |
162 -- 180 |
3 -- 36 |
proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases |
|
_____________161________________________________181\n_____________|__________________________________|\n5'-CCA...CAAUC________A_________________________AUUUU...UCU-3'\n______________GGUACAGC_GGU_______________UUUUUCA\n______________||||||||_:|:_______________|||||||\n______________CCAUGUCG_UCG_______________AAAAAGU\n3'-UUU...AAGGA________A___UAAAAUACCCAAUAC_______CG-5'\n_____________|__________________________________|\n_____________37_________________________________2\n |
174 -- 180 |
3 -- 9 |
-16.9285 kcal/mol |
3.46571 kcal/mol |
1.49503 kcal/mol |
161 181@LB@ | |@LB@5'-CCA...CAAUC A AUUUU...UCU-3'@LB@ GGUACAGC GGU UUUUUCA@LB@ |||||||| :|: |||||||@LB@ CCAUGUCG UCG AAAAAGU@LB@3'-UUU...AAGGA A UAAAAUACCCAAUAC CG-5'@LB@ | |@LB@ 37 2@LB@@LB@@LB@Energy -11.97 kcal/mol@LB@Hybridization Energy -16.9285 kcal/mol@LB@Unfolding Energy - mRNA 3.46571 kcal/mol@LB@Unfolding Energy - sRNA 1.49503 kcal/mol@LB@@LB@Position - mRNA 162 -- 180@LB@Position - sRNA 3 -- 36@LB@Position Seed - mRNA 174 -- 180@LB@Position Seed - sRNA 3 -- 9@LB@ |
| 110 |
0.004262 |
0.1302 |
b1871 |
cmoB |
-11.44 |
0.086999 |
165 -- 182 |
22 -- 44 |
tRNA (cmo5U34)-carboxymethyltransferase carboxy-SAM-dependent |
|
_____________164______________________183\n_____________|________________________|\n5'-CAC...AACUU______A_________________AAAAG...AGC-3'\n______________UGGUUC_CUGG______UGGCAUU\n______________||||||_||||______|:|||||\n______________ACCAAG_GACC______AUCGUAA\n3'-UUU...CCUCC___________AUGUCG_______AAUAC...UCG-5'\n_____________|________________________|\n_____________45_______________________21\n |
176 -- 182 |
22 -- 28 |
-20.1895 kcal/mol |
4.19283 kcal/mol |
4.55859 kcal/mol |
164 183@LB@ | |@LB@5'-CAC...AACUU A AAAAG...AGC-3'@LB@ UGGUUC CUGG UGGCAUU@LB@ |||||| |||| |:|||||@LB@ ACCAAG GACC AUCGUAA@LB@3'-UUU...CCUCC AUGUCG AAUAC...UCG-5'@LB@ | |@LB@ 45 21@LB@@LB@@LB@Energy -11.44 kcal/mol@LB@Hybridization Energy -20.1895 kcal/mol@LB@Unfolding Energy - mRNA 4.19283 kcal/mol@LB@Unfolding Energy - sRNA 4.55859 kcal/mol@LB@@LB@Position - mRNA 165 -- 182@LB@Position - sRNA 22 -- 44@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 141 |
0.006623 |
0.1579 |
b1992 |
cobS |
-16.13 |
0.004945 |
167 -- 192 |
24 -- 49 |
cobalamin synthase |
|
_____________166_________________________193\n_____________|___________________________|\n5'-GAG...AGUAU__CU_________G_____UGG_____AAAAU...GUA-3'\n______________GG__GGUGGUUUC_GGUAU____AGUA\n______________||__|||||||:|_||||:____||:|\n______________CC__CCACCAAGG_CCAUG____UCGU\n3'-UUU...CGAUU__U__________A_____UCGA____AAAAU...UCG-5'\n_____________|___________________________|\n_____________50__________________________23\n |
173 -- 179 |
38 -- 44 |
-26.3933 kcal/mol |
5.70356 kcal/mol |
4.5591 kcal/mol |
166 193@LB@ | |@LB@5'-GAG...AGUAU CU G UGG AAAAU...GUA-3'@LB@ GG GGUGGUUUC GGUAU AGUA@LB@ || |||||||:| ||||: ||:|@LB@ CC CCACCAAGG CCAUG UCGU@LB@3'-UUU...CGAUU U A UCGA AAAAU...UCG-5'@LB@ | |@LB@ 50 23@LB@@LB@@LB@Energy -16.13 kcal/mol@LB@Hybridization Energy -26.3933 kcal/mol@LB@Unfolding Energy - mRNA 5.70356 kcal/mol@LB@Unfolding Energy - sRNA 4.5591 kcal/mol@LB@@LB@Position - mRNA 167 -- 192@LB@Position - sRNA 24 -- 49@LB@Position Seed - mRNA 173 -- 179@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 176 |
0.009679 |
0.1848 |
b4348 |
hsdS |
-12.85 |
0.041875 |
168 -- 192 |
15 -- 42 |
specificity determinant for hsdM and hsdR |
|
_____________167__________________________193\n_____________|____________________________|\n5'-CUG...CGUCA___G____A____A________G_____GUGAA...UAA-3'\n______________GUU_CUGG___AG__AGCGUUU_GUGGG\n______________|||_||||___||__|||:|||_:||||\n______________CAA_GACC___UC__UCGUAAA_UACCC\n3'-UUU...UCCAC___G____AUG__GA_______A_____AAUAC...UCG-5'\n_____________|____________________________|\n_____________43___________________________14\n |
180 -- 186 |
21 -- 27 |
-24.8178 kcal/mol |
7.40251 kcal/mol |
4.57031 kcal/mol |
167 193@LB@ | |@LB@5'-CUG...CGUCA G A A G GUGAA...UAA-3'@LB@ GUU CUGG AG AGCGUUU GUGGG@LB@ ||| |||| || |||:||| :||||@LB@ CAA GACC UC UCGUAAA UACCC@LB@3'-UUU...UCCAC G AUG GA A AAUAC...UCG-5'@LB@ | |@LB@ 43 14@LB@@LB@@LB@Energy -12.85 kcal/mol@LB@Hybridization Energy -24.8178 kcal/mol@LB@Unfolding Energy - mRNA 7.40251 kcal/mol@LB@Unfolding Energy - sRNA 4.57031 kcal/mol@LB@@LB@Position - mRNA 168 -- 192@LB@Position - sRNA 15 -- 42@LB@Position Seed - mRNA 180 -- 186@LB@Position Seed - sRNA 21 -- 27@LB@ |
| 104 |
0.003825 |
0.1236 |
b0081 |
mraZ |
-12.90 |
0.040525 |
169 -- 210 |
15 -- 49 |
RsmH methytransferase inhibitor |
|
_____________168________________________________________211\n_____________|__________________________________________|\n5'-GAU...AUUGU____CAAA____GAAUAAGG____A_________GUUCC___GAGCA...AAA-3'\n______________GGGG____GUGG________GGUG_GGCUGGCAU_____GGG\n______________||:|____||||________|||:_:|||:||||_____|||\n______________CCUC____CACC________CCAU_UCGAUCGUA_____CCC\n3'-UUU...CGAUU____________AAGGA_______G_________AAAUA___AAUAC...UCG-5'\n_____________|__________________________________________|\n_____________50_________________________________________14\n |
196 -- 202 |
23 -- 29 |
-32.8076 kcal/mol |
15.3299 kcal/mol |
4.57366 kcal/mol |
168 211@LB@ | |@LB@5'-GAU...AUUGU CAAA GAAUAAGG A GUUCC GAGCA...AAA-3'@LB@ GGGG GUGG GGUG GGCUGGCAU GGG@LB@ ||:| |||| |||: :|||:|||| |||@LB@ CCUC CACC CCAU UCGAUCGUA CCC@LB@3'-UUU...CGAUU AAGGA G AAAUA AAUAC...UCG-5'@LB@ | |@LB@ 50 14@LB@@LB@@LB@Energy -12.90 kcal/mol@LB@Hybridization Energy -32.8076 kcal/mol@LB@Unfolding Energy - mRNA 15.3299 kcal/mol@LB@Unfolding Energy - sRNA 4.57366 kcal/mol@LB@@LB@Position - mRNA 169 -- 210@LB@Position - sRNA 15 -- 49@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 23 -- 29@LB@ |
