190 |
0.005086 |
0.123 |
pa0591 |
N/A |
-15.37 |
0.007942 |
156 -- 173 |
100 -- 120 |
protein ApaG |
|
_____________155___________________174\n_____________|_____________________|\n5'-UCA...CAGGC_____________________ACACU...CGG-3'\n______________AAUCGU___UAGUCUGAUGAG\n______________||:|||___|||:||||||||\n______________UUGGCA___AUCGGACUACUC\n3'-UUU...AGUUU______CUA____________CUCUA...GUU-5'\n_____________|_____________________|\n_____________121___________________99\n |
167 -- 173 |
100 -- 106 |
-22.6098 kcal/mol |
4.99015 kcal/mol |
2.24919 kcal/mol |
155 174@LB@ | |@LB@5'-UCA...CAGGC ACACU...CGG-3'@LB@ AAUCGU UAGUCUGAUGAG@LB@ ||:||| |||:||||||||@LB@ UUGGCA AUCGGACUACUC@LB@3'-UUU...AGUUU CUA CUCUA...GUU-5'@LB@ | |@LB@ 121 99@LB@@LB@@LB@Energy -15.37 kcal/mol@LB@Hybridization Energy -22.6098 kcal/mol@LB@Unfolding Energy - mRNA 4.99015 kcal/mol@LB@Unfolding Energy - sRNA 2.24919 kcal/mol@LB@@LB@Position - mRNA 156 -- 173@LB@Position - sRNA 100 -- 120@LB@Position Seed - mRNA 167 -- 173@LB@Position Seed - sRNA 100 -- 106@LB@ |
14 |
1.283e-05 |
0.004211 |
pa2953 |
N/A |
-15.00 |
0.010274 |
173 -- 195 |
95 -- 119 |
electron transfer flavoprotein-ubiquinone oxidoreductase |
|
_____________172________________________196\n_____________|__________________________|\n5'-CGG...CAGAU_____________U___GU_______CGAUA...CCG-3'\n______________ACCGUGA___GCC_UGA__AGGAGAU\n______________|||||||___|||_|||__|||||||\n______________UGGCACU___CGG_ACU__UCCUCUA\n3'-UUU...GUUUU_______AAU_______AC_______UUAGA...GUU-5'\n_____________|__________________________|\n_____________120________________________94\n |
189 -- 195 |
95 -- 101 |
-27.294 kcal/mol |
6.46266 kcal/mol |
5.83995 kcal/mol |
172 196@LB@ | |@LB@5'-CGG...CAGAU U GU CGAUA...CCG-3'@LB@ ACCGUGA GCC UGA AGGAGAU@LB@ ||||||| ||| ||| |||||||@LB@ UGGCACU CGG ACU UCCUCUA@LB@3'-UUU...GUUUU AAU AC UUAGA...GUU-5'@LB@ | |@LB@ 120 94@LB@@LB@@LB@Energy -15.00 kcal/mol@LB@Hybridization Energy -27.294 kcal/mol@LB@Unfolding Energy - mRNA 6.46266 kcal/mol@LB@Unfolding Energy - sRNA 5.83995 kcal/mol@LB@@LB@Position - mRNA 173 -- 195@LB@Position - sRNA 95 -- 119@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 95 -- 101@LB@ |
147 |
0.003398 |
0.1053 |
pa4657 |
N/A |
-14.94 |
0.010704 |
152 -- 169 |
105 -- 123 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________151_________________170\n_____________|___________________|\n5'-UCU...GUACA_____________C_____UCCAG...AGG-3'\n______________AGAAACC_UGAUU_GCCUG\n______________|:|||||_|||||_|||||\n______________UUUUUGG_ACUAA_CGGAC\n3'-UUU...CCCAG_______C_____U_____UACUC...GUU-5'\n_____________|___________________|\n_____________124_________________104\n |
152 -- 158 |
117 -- 123 |
-19.6832 kcal/mol |
2.50735 kcal/mol |
2.24275 kcal/mol |
151 170@LB@ | |@LB@5'-UCU...GUACA C UCCAG...AGG-3'@LB@ AGAAACC UGAUU GCCUG@LB@ |:||||| ||||| |||||@LB@ UUUUUGG ACUAA CGGAC@LB@3'-UUU...CCCAG C U UACUC...GUU-5'@LB@ | |@LB@ 124 104@LB@@LB@@LB@Energy -14.94 kcal/mol@LB@Hybridization Energy -19.6832 kcal/mol@LB@Unfolding Energy - mRNA 2.50735 kcal/mol@LB@Unfolding Energy - sRNA 2.24275 kcal/mol@LB@@LB@Position - mRNA 152 -- 169@LB@Position - sRNA 105 -- 123@LB@Position Seed - mRNA 152 -- 158@LB@Position Seed - sRNA 117 -- 123@LB@ |
34 |
0.0001037 |
0.01388 |
pa0494 |
N/A |
-14.76 |
0.012046 |
49 -- 92 |
75 -- 117 |
acetyl-CoA carboxylase biotin carboxylase subunit |
|
_____________48_______________________________________________93\n_____________|________________________________________________|\n5'-CGA...GGCAG______C__G_____C________________C__UUU_____AG___AGGCC...CGG-3'\n______________CGUGAU_GG_CUGAU___GAGGUGA__UGAAG_AG___UCCGA__UGC\n______________||||||_:|_|||||___|||:|:|__|||||_||___|||||__|||\n______________GCACUA_UC_GACUA___CUCUAUU__ACUUC_UC___AGGCU__ACG\n3'-UUU...UUUUG______A__G_____CUC_______AG________________G____CACCC...GUU-5'\n_____________|________________________________________________|\n_____________118______________________________________________74\n |
65 -- 71 |
93 -- 99 |
-39.1416 kcal/mol |
12.2169 kcal/mol |
12.1721 kcal/mol |
48 93@LB@ | |@LB@5'-CGA...GGCAG C G C C UUU AG AGGCC...CGG-3'@LB@ CGUGAU GG CUGAU GAGGUGA UGAAG AG UCCGA UGC@LB@ |||||| :| ||||| |||:|:| ||||| || ||||| |||@LB@ GCACUA UC GACUA CUCUAUU ACUUC UC AGGCU ACG@LB@3'-UUU...UUUUG A G CUC AG G CACCC...GUU-5'@LB@ | |@LB@ 118 74@LB@@LB@@LB@Energy -14.76 kcal/mol@LB@Hybridization Energy -39.1416 kcal/mol@LB@Unfolding Energy - mRNA 12.2169 kcal/mol@LB@Unfolding Energy - sRNA 12.1721 kcal/mol@LB@@LB@Position - mRNA 49 -- 92@LB@Position - sRNA 75 -- 117@LB@Position Seed - mRNA 65 -- 71@LB@Position Seed - sRNA 93 -- 99@LB@ |
11 |
1.195e-05 |
0.004211 |
pa3638 |
N/A |
-14.67 |
0.012752 |
102 -- 115 |
100 -- 120 |
tRNA(Ile)-lysidine synthase |
|
_____________101___________________116\n_____________|_____________________|\n5'-GCG...GUUAC_____________________CUACG...CCA-3'\n______________GACC_______GCCUGAUGAG\n______________:|||_______||||||||||\n______________UUGG_______CGGACUACUC\n3'-UUU...AGUUU____CACUAAU__________CUCUA...GUU-5'\n_____________|_____________________|\n_____________121___________________99\n |
109 -- 115 |
100 -- 106 |
-19.8992 kcal/mol |
2.98005 kcal/mol |
2.24919 kcal/mol |
101 116@LB@ | |@LB@5'-GCG...GUUAC CUACG...CCA-3'@LB@ GACC GCCUGAUGAG@LB@ :||| ||||||||||@LB@ UUGG CGGACUACUC@LB@3'-UUU...AGUUU CACUAAU CUCUA...GUU-5'@LB@ | |@LB@ 121 99@LB@@LB@@LB@Energy -14.67 kcal/mol@LB@Hybridization Energy -19.8992 kcal/mol@LB@Unfolding Energy - mRNA 2.98005 kcal/mol@LB@Unfolding Energy - sRNA 2.24919 kcal/mol@LB@@LB@Position - mRNA 102 -- 115@LB@Position - sRNA 100 -- 120@LB@Position Seed - mRNA 109 -- 115@LB@Position Seed - sRNA 100 -- 106@LB@ |
19 |
3.906e-05 |
0.009449 |
pa0443 |
N/A |
-14.62 |
0.013168 |
152 -- 204 |
75 -- 119 |
transporter |
|
_____________151______________________________________________________205\n_____________|________________________________________________________|\n5'-UUG...CGGCC____C________C______C_______CUAAAAGAAU_________G__CA____AACAG...UCG-3'\n______________AUCG__AUUAGCC_GAUGAG_GA_AUAA__________UCUGGAGAG_CC___UGC\n______________|:||__|||||||_||||||_||_||||__________||||:||||_||___|||\n______________UGGC__UAAUCGG_CUACUC_CU_UAUU__________AGACUUCUC_GG___ACG\n3'-UUU...GUUUU____AC_______A_________C_______________________A__CUG___CACCC...GUU-5'\n_____________|________________________________________________________|\n_____________120______________________________________________________74\n |
190 -- 196 |
84 -- 90 |
-39.3471 kcal/mol |
12.5408 kcal/mol |
12.1884 kcal/mol |
151 205@LB@ | |@LB@5'-UUG...CGGCC C C C CUAAAAGAAU G CA AACAG...UCG-3'@LB@ AUCG AUUAGCC GAUGAG GA AUAA UCUGGAGAG CC UGC@LB@ |:|| ||||||| |||||| || |||| ||||:|||| || |||@LB@ UGGC UAAUCGG CUACUC CU UAUU AGACUUCUC GG ACG@LB@3'-UUU...GUUUU AC A C A CUG CACCC...GUU-5'@LB@ | |@LB@ 120 74@LB@@LB@@LB@Energy -14.62 kcal/mol@LB@Hybridization Energy -39.3471 kcal/mol@LB@Unfolding Energy - mRNA 12.5408 kcal/mol@LB@Unfolding Energy - sRNA 12.1884 kcal/mol@LB@@LB@Position - mRNA 152 -- 204@LB@Position - sRNA 75 -- 119@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 84 -- 90@LB@ |
58 |
0.0005047 |
0.0395 |
pa4066 |
N/A |
-14.62 |
0.013175 |
166 -- 238 |
44 -- 118 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________165______________________________________________________________________________________239\n_____________|________________________________________________________________________________________|\n5'-AUC...AUGGC____C___CC_________CCC_______U__C__________AU______CUCCC__ACC_______C___________________CCUGC...UGA-3'\n______________CUGU_GAU__GCCU_AUGA___GGAGAUA_UC________CCG__GCUGCG_____UG___GUC_CUC____UGCUGGCU___UUCGC\n______________|:||_|||__||||_||||___|||||||_||________|||__:|||||_____||___|||_|||____|:|:||||___:||||\n______________GGCA_CUA__CGGA_UACU___CCUCUAU_AG________GGC__UGACGC_____AC___CAG_GAG____AUGGCCGA___GAGCG\n3'-UUU...UUUUU________AU____C______________U__ACUUCUCA__________________C_____A___UCGA________CUA_____CUGGU...GUU-5'\n_____________|________________________________________________________________________________________|\n_____________119______________________________________________________________________________________43\n |
227 -- 233 |
52 -- 58 |
-54.201 kcal/mol |
16.2747 kcal/mol |
23.3102 kcal/mol |
165 239@LB@ | |@LB@5'-AUC...AUGGC C CC CCC U C AU CUCCC ACC C CCUGC...UGA-3'@LB@ CUGU GAU GCCU AUGA GGAGAUA UC CCG GCUGCG UG GUC CUC UGCUGGCU UUCGC@LB@ |:|| ||| |||| |||| ||||||| || ||| :||||| || ||| ||| |:|:|||| :||||@LB@ GGCA CUA CGGA UACU CCUCUAU AG GGC UGACGC AC CAG GAG AUGGCCGA GAGCG@LB@3'-UUU...UUUUU AU C U ACUUCUCA C A UCGA CUA CUGGU...GUU-5'@LB@ | |@LB@ 119 43@LB@@LB@@LB@Energy -14.62 kcal/mol@LB@Hybridization Energy -54.201 kcal/mol@LB@Unfolding Energy - mRNA 16.2747 kcal/mol@LB@Unfolding Energy - sRNA 23.3102 kcal/mol@LB@@LB@Position - mRNA 166 -- 238@LB@Position - sRNA 44 -- 118@LB@Position Seed - mRNA 227 -- 233@LB@Position Seed - sRNA 52 -- 58@LB@ |
171 |
0.004404 |
0.117 |
pa3327 |
N/A |
-14.55 |
0.013827 |
159 -- 238 |
39 -- 118 |
non-ribosomal peptide synthetase |
|
_____________158_______________________________________________________________________________________239\n_____________|_________________________________________________________________________________________|\n5'-AUU...GGUGC________C___GA__C__U___UUG___________GA____A_G_A___UUC_____G_UC___________A_______CCU____ACGGG...GCU-3'\n______________CCGUG_UU_GCC__AU_GA_GGA______UUGAAGAG__CG_C_G_G_UGG___GUUUC_C__GCUUGCC_GCU____UCGC___ACCA\n______________|||||_||_|||__||_||_|||______:|||||||__||_|_|_|_|||___||:||_|__||||:||_|||____||||___||||\n______________GGCAC_AA_CGG__UA_CU_CCU______GACUUCUC__GC_G_C_C_ACC___CAGAG_G__CGAAUGG_CGA____AGCG___UGGU\n3'-UUU...UUUUU_____U__U___AC_________CUAUUA________AG__U_A_G_____________A_U________C___CUAG____C______CAACU...GUU-5'\n_____________|_________________________________________________________________________________________|\n_____________119_______________________________________________________________________________________38\n |
217 -- 223 |
56 -- 62 |
-61.1953 kcal/mol |
23.2465 kcal/mol |
23.4063 kcal/mol |
158 239@LB@ | |@LB@5'-AUU...GGUGC C GA C U UUG GA A G A UUC G UC A CCU ACGGG...GCU-3'@LB@ CCGUG UU GCC AU GA GGA UUGAAGAG CG C G G UGG GUUUC C GCUUGCC GCU UCGC ACCA@LB@ ||||| || ||| || || ||| :||||||| || | | | ||| ||:|| | ||||:|| ||| |||| ||||@LB@ GGCAC AA CGG UA CU CCU GACUUCUC GC G C C ACC CAGAG G CGAAUGG CGA AGCG UGGU@LB@3'-UUU...UUUUU U U AC CUAUUA AG U A G A U C CUAG C CAACU...GUU-5'@LB@ | |@LB@ 119 38@LB@@LB@@LB@Energy -14.55 kcal/mol@LB@Hybridization Energy -61.1953 kcal/mol@LB@Unfolding Energy - mRNA 23.2465 kcal/mol@LB@Unfolding Energy - sRNA 23.4063 kcal/mol@LB@@LB@Position - mRNA 159 -- 238@LB@Position - sRNA 39 -- 118@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 56 -- 62@LB@ |
172 |
0.004404 |
0.117 |
pa3327 |
N/A |
-14.55 |
0.013827 |
159 -- 238 |
39 -- 118 |
non-ribosomal peptide synthetase |
|
_____________158_______________________________________________________________________________________239\n_____________|_________________________________________________________________________________________|\n5'-AUU...GGUGC________C___GA__C__U___UUG___________GA____A_G_A___UUC_____G_UC___________A_______CCU____ACGGG...GCU-3'\n______________CCGUG_UU_GCC__AU_GA_GGA______UUGAAGAG__CG_C_G_G_UGG___GUUUC_C__GCUUGCC_GCU____UCGC___ACCA\n______________|||||_||_|||__||_||_|||______:|||||||__||_|_|_|_|||___||:||_|__||||:||_|||____||||___||||\n______________GGCAC_AA_CGG__UA_CU_CCU______GACUUCUC__GC_G_C_C_ACC___CAGAG_G__CGAAUGG_CGA____AGCG___UGGU\n3'-UUU...UUUUU_____U__U___AC_________CUAUUA________AG__U_A_G_____________A_U________C___CUAG____C______CAACU...GUU-5'\n_____________|_________________________________________________________________________________________|\n_____________119_______________________________________________________________________________________38\n |
217 -- 223 |
56 -- 62 |
-61.1953 kcal/mol |
23.2465 kcal/mol |
23.4063 kcal/mol |
158 239@LB@ | |@LB@5'-AUU...GGUGC C GA C U UUG GA A G A UUC G UC A CCU ACGGG...GCU-3'@LB@ CCGUG UU GCC AU GA GGA UUGAAGAG CG C G G UGG GUUUC C GCUUGCC GCU UCGC ACCA@LB@ ||||| || ||| || || ||| :||||||| || | | | ||| ||:|| | ||||:|| ||| |||| ||||@LB@ GGCAC AA CGG UA CU CCU GACUUCUC GC G C C ACC CAGAG G CGAAUGG CGA AGCG UGGU@LB@3'-UUU...UUUUU U U AC CUAUUA AG U A G A U C CUAG C CAACU...GUU-5'@LB@ | |@LB@ 119 38@LB@@LB@@LB@Energy -14.55 kcal/mol@LB@Hybridization Energy -61.1953 kcal/mol@LB@Unfolding Energy - mRNA 23.2465 kcal/mol@LB@Unfolding Energy - sRNA 23.4063 kcal/mol@LB@@LB@Position - mRNA 159 -- 238@LB@Position - sRNA 39 -- 118@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 56 -- 62@LB@ |
173 |
0.004404 |
0.117 |
pa3327 |
N/A |
-14.55 |
0.013827 |
159 -- 238 |
39 -- 118 |
non-ribosomal peptide synthetase |
|
_____________158_______________________________________________________________________________________239\n_____________|_________________________________________________________________________________________|\n5'-AUU...GGUGC________C___GA__C__U___UUG___________GA____A_G_A___UUC_____G_UC___________A_______CCU____ACGGG...GCU-3'\n______________CCGUG_UU_GCC__AU_GA_GGA______UUGAAGAG__CG_C_G_G_UGG___GUUUC_C__GCUUGCC_GCU____UCGC___ACCA\n______________|||||_||_|||__||_||_|||______:|||||||__||_|_|_|_|||___||:||_|__||||:||_|||____||||___||||\n______________GGCAC_AA_CGG__UA_CU_CCU______GACUUCUC__GC_G_C_C_ACC___CAGAG_G__CGAAUGG_CGA____AGCG___UGGU\n3'-UUU...UUUUU_____U__U___AC_________CUAUUA________AG__U_A_G_____________A_U________C___CUAG____C______CAACU...GUU-5'\n_____________|_________________________________________________________________________________________|\n_____________119_______________________________________________________________________________________38\n |
217 -- 223 |
56 -- 62 |
-61.1953 kcal/mol |
23.2465 kcal/mol |
23.4063 kcal/mol |
158 239@LB@ | |@LB@5'-AUU...GGUGC C GA C U UUG GA A G A UUC G UC A CCU ACGGG...GCU-3'@LB@ CCGUG UU GCC AU GA GGA UUGAAGAG CG C G G UGG GUUUC C GCUUGCC GCU UCGC ACCA@LB@ ||||| || ||| || || ||| :||||||| || | | | ||| ||:|| | ||||:|| ||| |||| ||||@LB@ GGCAC AA CGG UA CU CCU GACUUCUC GC G C C ACC CAGAG G CGAAUGG CGA AGCG UGGU@LB@3'-UUU...UUUUU U U AC CUAUUA AG U A G A U C CUAG C CAACU...GUU-5'@LB@ | |@LB@ 119 38@LB@@LB@@LB@Energy -14.55 kcal/mol@LB@Hybridization Energy -61.1953 kcal/mol@LB@Unfolding Energy - mRNA 23.2465 kcal/mol@LB@Unfolding Energy - sRNA 23.4063 kcal/mol@LB@@LB@Position - mRNA 159 -- 238@LB@Position - sRNA 39 -- 118@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 56 -- 62@LB@ |