| 136 |
0.006805 |
0.1774 |
stm2812 |
N/A |
-16.76 |
0.060981 |
84 -- 153 |
36 -- 90 |
MFS transporter |
|
_____________83_____________________________________________154\n_____________|______________________________________________|\n5'-GGC...AUCCG__C________CUCUCCUCAAAGC______UU_______UC_____UCCCC...UGC-3'\n______________GC_AACGCAAU_____________GCACGA__CAUCACG__ACCGU\n______________||_|||:|||:_____________:|||:|__||||||:__|||||\n______________CG_UUGUGUUG_____________UGUGUU__GUAGUGU__UGGCA\n3'-UUU...GUUAA__U________U__________________________________UUCGG...UCA-5'\n_____________|______________________________________________|\n_____________91_____________________________________________35\n |
116 -- 122 |
66 -- 72 |
-26.7431 kcal/mol |
6.46375 kcal/mol |
9.42239 kcal/mol |
83 154@LB@ | |@LB@5'-GGC...AUCCG C CUCUCCUCAAAGC UU UC UCCCC...UGC-3'@LB@ GC AACGCAAU GCACGA CAUCACG ACCGU@LB@ || |||:|||: :|||:| ||||||: |||||@LB@ CG UUGUGUUG UGUGUU GUAGUGU UGGCA@LB@3'-UUU...GUUAA U U UUCGG...UCA-5'@LB@ | |@LB@ 91 35@LB@@LB@@LB@Energy -16.76 kcal/mol@LB@Hybridization Energy -26.7431 kcal/mol@LB@Unfolding Energy - mRNA 6.46375 kcal/mol@LB@Unfolding Energy - sRNA 9.42239 kcal/mol@LB@@LB@Position - mRNA 84 -- 153@LB@Position - sRNA 36 -- 90@LB@Position Seed - mRNA 116 -- 122@LB@Position Seed - sRNA 66 -- 72@LB@ |
| 165 |
0.008886 |
0.1918 |
stm0281 |
N/A |
-13.47 |
0.204933 |
267 -- 289 |
36 -- 56 |
type VI secretion system-associated protein |
|
_____________266______________________________________________290\n_____________|________________________________________________|\n5'-UGA...UAAUU____A_____A______A__UAU___C_____UGACC_C_______G_AGUGA...ACC-3'\n______________ACGG_ACGGG_UAAAUG_AU___GAG_UGGAA_____G_GUAGUCU_G\n______________||:|_||:||_||||||_|:___:||_||:||_____|_|||||||_|\n______________UGUC_UGUCC_AUUUAC_UG___UUC_ACUUU_____C_CAUCAGA_C\n3'-UUU...AUACC__________C______A__UCC_________UUC___________G_GAUGG...UCA-5'\n_____________|________________________________________________|\n_____________57_______________________________________________35\n |
219 -- 225 |
121 -- 127 |
-29.4304 kcal/mol |
8.43831 kcal/mol |
11.9516 kcal/mol |
266 290@LB@ | |@LB@5'-UGA...UAAUU A A A UAU C UGACC C G AGUGA...ACC-3'@LB@ ACGG ACGGG UAAAUG AU GAG UGGAA G GUAGUCU G@LB@ ||:| ||:|| |||||| |: :|| ||:|| | ||||||| |@LB@ UGUC UGUCC AUUUAC UG UUC ACUUU C CAUCAGA C@LB@3'-UUU...AUACC C A UCC UUC G GAUGG...UCA-5'@LB@ | |@LB@ 57 35@LB@@LB@@LB@Energy -13.47 kcal/mol@LB@Hybridization Energy -29.4304 kcal/mol@LB@Unfolding Energy - mRNA 8.43831 kcal/mol@LB@Unfolding Energy - sRNA 11.9516 kcal/mol@LB@@LB@Position - mRNA 267 -- 289@LB@Position - sRNA 36 -- 56@LB@Position Seed - mRNA 219 -- 225@LB@Position Seed - sRNA 121 -- 127@LB@ |
| 198 |
0.01098 |
0.197 |
stm2803 |
N/A |
-14.51 |
0.140962 |
192 -- 262 |
36 -- 101 |
DNA-binding transcriptional regulator |
|
_____________191___________________________263\n_____________|_____________________________|\n5'-GCU...AAAAA________UA___C_____UAU_______UCGCU...CGC-3'\n______________GCAGACCA__UGC__GCGC___CAGCACA\n______________||||||||__|||__:|:|___||:||||\n______________CGUCUGGU__ACG__UGUG___GUUGUGU\n3'-UUU...CUUAG________UA___UU____UU________UGUAG...UCA-5'\n_____________|_____________________________|\n_____________102___________________________35\n |
213 -- 219 |
74 -- 80 |
-31.0005 kcal/mol |
8.41541 kcal/mol |
13.1066 kcal/mol |
191 263@LB@ | |@LB@5'-GCU...AAAAA UA C UAU UCGCU...CGC-3'@LB@ GCAGACCA UGC GCGC CAGCACA@LB@ |||||||| ||| :|:| ||:||||@LB@ CGUCUGGU ACG UGUG GUUGUGU@LB@3'-UUU...CUUAG UA UU UU UGUAG...UCA-5'@LB@ | |@LB@ 102 35@LB@@LB@@LB@Energy -14.51 kcal/mol@LB@Hybridization Energy -31.0005 kcal/mol@LB@Unfolding Energy - mRNA 8.41541 kcal/mol@LB@Unfolding Energy - sRNA 13.1066 kcal/mol@LB@@LB@Position - mRNA 192 -- 262@LB@Position - sRNA 36 -- 101@LB@Position Seed - mRNA 213 -- 219@LB@Position Seed - sRNA 74 -- 80@LB@ |
| 128 |
0.006467 |
0.1774 |
stm3907 |
N/A |
-18.55 |
0.030594 |
118 -- 173 |
37 -- 89 |
|
|
_____________117__________________________174\n_____________|____________________________|\n5'-UCA...AAAAA____________ACCAGU______G___AAAAC...UUU-3'\n______________CAGACGCAACAA______CAGCAU_AUA\n______________||:||:||||||______||:|||_|:|\n______________GUUUGUGUUGUU______GUUGUA_UGU\n3'-UUU...UUAAC____________GU__________G___UGGCA...UCA-5'\n_____________|____________________________|\n_____________90___________________________36\n |
123 -- 129 |
78 -- 84 |
-22.8944 kcal/mol |
3.16008 kcal/mol |
6.30461 kcal/mol |
117 174@LB@ | |@LB@5'-UCA...AAAAA ACCAGU G AAAAC...UUU-3'@LB@ CAGACGCAACAA CAGCAU AUA@LB@ ||:||:|||||| ||:||| |:|@LB@ GUUUGUGUUGUU GUUGUA UGU@LB@3'-UUU...UUAAC GU G UGGCA...UCA-5'@LB@ | |@LB@ 90 36@LB@@LB@@LB@Energy -18.55 kcal/mol@LB@Hybridization Energy -22.8944 kcal/mol@LB@Unfolding Energy - mRNA 3.16008 kcal/mol@LB@Unfolding Energy - sRNA 6.30461 kcal/mol@LB@@LB@Position - mRNA 118 -- 173@LB@Position - sRNA 37 -- 89@LB@Position Seed - mRNA 123 -- 129@LB@Position Seed - sRNA 78 -- 84@LB@ |
| 58 |
0.002307 |
0.14 |
stm2234 |
N/A |
-13.92 |
0.174542 |
131 -- 196 |
38 -- 89 |
phage tail protein |
stm2705 stm2233 |
_____________130______197\n_____________|________|\n5'-CUG...UACAC________AUCCA...CAG-3'\n______________CAGACAGG\n______________||||||||\n______________GUCUGUCC\n3'-UUU...UACCU________CAUUU...UCA-5'\n_____________|________|\n_____________90_______37\n |
132 -- 138 |
153 -- 159 |
-13.9425 kcal/mol |
2.61206 kcal/mol |
2.72972 kcal/mol |
130 197@LB@ | |@LB@5'-CUG...UACAC AUCCA...CAG-3'@LB@ CAGACAGG@LB@ ||||||||@LB@ GUCUGUCC@LB@3'-UUU...UACCU CAUUU...UCA-5'@LB@ | |@LB@ 90 37@LB@@LB@@LB@Energy -13.92 kcal/mol@LB@Hybridization Energy -13.9425 kcal/mol@LB@Unfolding Energy - mRNA 2.61206 kcal/mol@LB@Unfolding Energy - sRNA 2.72972 kcal/mol@LB@@LB@Position - mRNA 131 -- 196@LB@Position - sRNA 38 -- 89@LB@Position Seed - mRNA 132 -- 138@LB@Position Seed - sRNA 153 -- 159@LB@ |
| 109 |
0.005328 |
0.1728 |
stm3082 |
N/A |
-12.60 |
0.275269 |
106 -- 154 |
38 -- 90 |
galactonate oxidoreductase |
|
_____________105________________________155\n_____________|__________________________|\n5'-AAU...ACAAC______UUUUUA_______UU_____GGCCU...CGG-3'\n______________GCAGAC______AACAACA__CAGCA\n______________|||:||______|||||||__||:||\n______________CGUUUG______UUGUUGU__GUUGU\n3'-UUU...GUUAA______UG__________________AGUGU...UCA-5'\n_____________|__________________________|\n_____________91_________________________37\n |
118 -- 124 |
76 -- 82 |
-16.9817 kcal/mol |
2.50135 kcal/mol |
3.80671 kcal/mol |
105 155@LB@ | |@LB@5'-AAU...ACAAC UUUUUA UU GGCCU...CGG-3'@LB@ GCAGAC AACAACA CAGCA@LB@ |||:|| ||||||| ||:||@LB@ CGUUUG UUGUUGU GUUGU@LB@3'-UUU...GUUAA UG AGUGU...UCA-5'@LB@ | |@LB@ 91 37@LB@@LB@@LB@Energy -12.60 kcal/mol@LB@Hybridization Energy -16.9817 kcal/mol@LB@Unfolding Energy - mRNA 2.50135 kcal/mol@LB@Unfolding Energy - sRNA 3.80671 kcal/mol@LB@@LB@Position - mRNA 106 -- 154@LB@Position - sRNA 38 -- 90@LB@Position Seed - mRNA 118 -- 124@LB@Position Seed - sRNA 76 -- 82@LB@ |
| 140 |
0.007169 |
0.182 |
stm3126 |
N/A |
-18.02 |
0.037639 |
66 -- 114 |
39 -- 91 |
putative amino acid transporter |
|
_____________65_______________________________115\n_____________|________________________________|\n5'-AUU...GCGCA______G______U___________UU_____UAUCC...UGA-3'\n______________UGCGGG_ACGGCG_CACAACGUUAU__ACCGU\n______________|||:::_||::|:_||||||:|:|:__|||||\n______________ACGUUU_UGUUGU_GUGUUGUAGUG__UGGCA\n3'-UUU...GGUUA______G______U___________U______UUCGG...UCA-5'\n_____________|________________________________|\n_____________92_______________________________38\n |
82 -- 88 |
69 -- 75 |
-33.8851 kcal/mol |
10.4253 kcal/mol |
9.42541 kcal/mol |
65 115@LB@ | |@LB@5'-AUU...GCGCA G U UU UAUCC...UGA-3'@LB@ UGCGGG ACGGCG CACAACGUUAU ACCGU@LB@ |||::: ||::|: ||||||:|:|: |||||@LB@ ACGUUU UGUUGU GUGUUGUAGUG UGGCA@LB@3'-UUU...GGUUA G U U UUCGG...UCA-5'@LB@ | |@LB@ 92 38@LB@@LB@@LB@Energy -18.02 kcal/mol@LB@Hybridization Energy -33.8851 kcal/mol@LB@Unfolding Energy - mRNA 10.4253 kcal/mol@LB@Unfolding Energy - sRNA 9.42541 kcal/mol@LB@@LB@Position - mRNA 66 -- 114@LB@Position - sRNA 39 -- 91@LB@Position Seed - mRNA 82 -- 88@LB@Position Seed - sRNA 69 -- 75@LB@ |
| 176 |
0.009613 |
0.1945 |
stm3378 |
N/A |
-14.56 |
0.138793 |
155 -- 243 |
45 -- 125 |
sulfoxide reductase heme-binding subunit YedZ |
|
_____________154_______________________________________________________________________________________244\n_____________|_________________________________________________________________________________________|\n5'-UGU...AAUGA____GCU_____GU____C_____CAAU_______AGAAUUU____G____U___________A____G_______U____________UUGUC...GUG-3'\n______________AGUC___UCGCU__AUCG_GGUCU____UUGCGGG_______UUAA_UGCG__C_UGACAGCA_AACA__AUAACC___GGCUAAAAGU\n______________||||___|||||__|:||_|||||____|:||:|:_______::||_|||:__|_::|||:||_||||__|:||||___:||:|||||:\n______________UCAG___AGCGA__UGGC_CCAGA____AGCGUCU_______GGUU_ACGU__G_GUUGUUGU_UUGU__UGUUGG___UCGGUUUUCG\n3'-UUU...UCCCA__________________A_____CUU___________________A____UU_U________G____AG______CAU__________GGUAG...UCA-5'\n_____________|_________________________________________________________________________________________|\n_____________126_______________________________________________________________________________________44\n |
209 -- 215 |
76 -- 82 |
-59.1156 kcal/mol |
19.0244 kcal/mol |
31.7466 kcal/mol |
154 244@LB@ | |@LB@5'-UGU...AAUGA GCU GU C CAAU AGAAUUU G U A G U UUGUC...GUG-3'@LB@ AGUC UCGCU AUCG GGUCU UUGCGGG UUAA UGCG C UGACAGCA AACA AUAACC GGCUAAAAGU@LB@ |||| ||||| |:|| ||||| |:||:|: ::|| |||: | ::|||:|| |||| |:|||| :||:|||||:@LB@ UCAG AGCGA UGGC CCAGA AGCGUCU GGUU ACGU G GUUGUUGU UUGU UGUUGG UCGGUUUUCG@LB@3'-UUU...UCCCA A CUU A UU U G AG CAU GGUAG...UCA-5'@LB@ | |@LB@ 126 44@LB@@LB@@LB@Energy -14.56 kcal/mol@LB@Hybridization Energy -59.1156 kcal/mol@LB@Unfolding Energy - mRNA 19.0244 kcal/mol@LB@Unfolding Energy - sRNA 31.7466 kcal/mol@LB@@LB@Position - mRNA 155 -- 243@LB@Position - sRNA 45 -- 125@LB@Position Seed - mRNA 209 -- 215@LB@Position Seed - sRNA 76 -- 82@LB@ |
| 188 |
0.01049 |
0.1967 |
stm0290 |
N/A |
-13.50 |
0.202376 |
129 -- 157 |
48 -- 69 |
|
|
_____________128____________________________________________________158\n_____________|______________________________________________________|\n5'-UGC...UUCUC______C___CAUACCGCA____________________________UC_____UGAAA...GAA-3'\n______________AUGGAU_GAC__________UACAGGA________AGGGU_GUUUUG__CUGCC\n______________|||||:_|||__________|||||||________|||||_||:|:|__||:||\n______________UACCUG_CUG__________AUGUCCU________UCCCA_CAGAGC__GAUGG\n3'-UUU...AGUGA______U___UCCCAUUUAC_______UCACUUUU_____U_____________CACCA...UCA-5'\n_____________|______________________________________________________|\n_____________70_____________________________________________________47\n |
220 -- 226 |
139 -- 145 |
-35.7606 kcal/mol |
12.8035 kcal/mol |
12.8046 kcal/mol |
128 158@LB@ | |@LB@5'-UGC...UUCUC C CAUACCGCA UC UGAAA...GAA-3'@LB@ AUGGAU GAC UACAGGA AGGGU GUUUUG CUGCC@LB@ |||||: ||| ||||||| ||||| ||:|:| ||:||@LB@ UACCUG CUG AUGUCCU UCCCA CAGAGC GAUGG@LB@3'-UUU...AGUGA U UCCCAUUUAC UCACUUUU U CACCA...UCA-5'@LB@ | |@LB@ 70 47@LB@@LB@@LB@Energy -13.50 kcal/mol@LB@Hybridization Energy -35.7606 kcal/mol@LB@Unfolding Energy - mRNA 12.8035 kcal/mol@LB@Unfolding Energy - sRNA 12.8046 kcal/mol@LB@@LB@Position - mRNA 129 -- 157@LB@Position - sRNA 48 -- 69@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 139 -- 145@LB@ |
| 17 |
0.0003055 |
0.06194 |
stm2694 |
N/A |
-22.95 |
0.005498 |
261 -- 295 |
52 -- 90 |
Fels-2 prophage protein |
|
_____________260_____________________________________296\n_____________|_______________________________________|\n5'-ACG...UAUCA_____________A_G____________AGU________UAUAA-3'\n______________GC___UACGACAA_A_AACGUUACAACC____GCCAAAA\n______________||___:||:||||_|_|||:|:||||||____|||||||\n______________CG___GUGUUGUU_U_UUGUAGUGUUGG____CGGUUUU\n3'-UUU...GUUAA__UUU________G_G____________CAUU_______CGGGU...UCA-5'\n_____________|_______________________________________|\n_____________91______________________________________51\n |
289 -- 295 |
52 -- 58 |
-35.4487 kcal/mol |
2.51857 kcal/mol |
14.0353 kcal/mol |
260 296@LB@ | |@LB@5'-ACG...UAUCA A G AGU UAUAA-3'@LB@ GC UACGACAA A AACGUUACAACC GCCAAAA@LB@ || :||:|||| | |||:|:|||||| |||||||@LB@ CG GUGUUGUU U UUGUAGUGUUGG CGGUUUU@LB@3'-UUU...GUUAA UUU G G CAUU CGGGU...UCA-5'@LB@ | |@LB@ 91 51@LB@@LB@@LB@Energy -22.95 kcal/mol@LB@Hybridization Energy -35.4487 kcal/mol@LB@Unfolding Energy - mRNA 2.51857 kcal/mol@LB@Unfolding Energy - sRNA 14.0353 kcal/mol@LB@@LB@Position - mRNA 261 -- 295@LB@Position - sRNA 52 -- 90@LB@Position Seed - mRNA 289 -- 295@LB@Position Seed - sRNA 52 -- 58@LB@ |
