| 51 |
0.001644 |
0.1212 |
bsu29870 |
ytzB |
-11.72 |
0.152375 |
23 -- 59 |
33 -- 85 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________22__________________________________________60\n_____________|___________________________________________|\n5'-CUG...AUUGC___________________________________________AAAAG...AAG-3'\n______________UUAACAGGAU_UUGGC__UGUU__________UCUGUAUAAUG\n______________|:|||||||:_|||:|__|||:__________||::|||||||\n______________AGUUGUCCUG_AACUG__ACAG__________AGGUAUAUUAC\n3'-AUU...GAAGU__________U_____UA____GCGUCGUUCA___________AACAG...CAA-5'\n_____________|___________________________________________|\n_____________86__________________________________________32\n |
163 -- 169 |
118 -- 124 |
-27.3559 kcal/mol |
7.06665 kcal/mol |
10.6143 kcal/mol |
22 60@LB@ | |@LB@5'-CUG...AUUGC AAAAG...AAG-3'@LB@ UUAACAGGAU UUGGC UGUU UCUGUAUAAUG@LB@ |:|||||||: |||:| |||: ||::|||||||@LB@ AGUUGUCCUG AACUG ACAG AGGUAUAUUAC@LB@3'-AUU...GAAGU U UA GCGUCGUUCA AACAG...CAA-5'@LB@ | |@LB@ 86 32@LB@@LB@@LB@Energy -11.72 kcal/mol@LB@Hybridization Energy -27.3559 kcal/mol@LB@Unfolding Energy - mRNA 7.06665 kcal/mol@LB@Unfolding Energy - sRNA 10.6143 kcal/mol@LB@@LB@Position - mRNA 23 -- 59@LB@Position - sRNA 33 -- 85@LB@Position Seed - mRNA 163 -- 169@LB@Position Seed - sRNA 118 -- 124@LB@ |
| 125 |
0.005817 |
0.1741 |
bsu26980 |
yraE |
-11.00 |
0.208718 |
35 -- 90 |
112 -- 185 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________34________________________________________________________91\n_____________|_________________________________________________________|\n5'-UAC...UUUGA___AG______________AA_______A____GGA_____________________AGCCA...CUG-3'\n______________ACU___UAUCGACAGG_CA_____AUUG_UCCG_______________GAUGUUGUC\n______________|||___:|||:|||||_||_____||||_||||_______________:||||||||\n______________UGA___GUAGUUGUCC_GU_____UAAC_AGGC_______________UUACAACAG\n3'-AUU...AAAAA___GAA__________U__AACUG_________GUCGUUCAAGGUAUA_________UGAAA...CAA-5'\n_____________|_________________________________________________________|\n_____________186_______________________________________________________111\n |
83 -- 89 |
113 -- 119 |
-30.5681 kcal/mol |
8.54797 kcal/mol |
10.8348 kcal/mol |
34 91@LB@ | |@LB@5'-UAC...UUUGA AG AA A GGA AGCCA...CUG-3'@LB@ ACU UAUCGACAGG CA AUUG UCCG GAUGUUGUC@LB@ ||| :|||:||||| || |||| |||| :||||||||@LB@ UGA GUAGUUGUCC GU UAAC AGGC UUACAACAG@LB@3'-AUU...AAAAA GAA U AACUG GUCGUUCAAGGUAUA UGAAA...CAA-5'@LB@ | |@LB@ 186 111@LB@@LB@@LB@Energy -11.00 kcal/mol@LB@Hybridization Energy -30.5681 kcal/mol@LB@Unfolding Energy - mRNA 8.54797 kcal/mol@LB@Unfolding Energy - sRNA 10.8348 kcal/mol@LB@@LB@Position - mRNA 35 -- 90@LB@Position - sRNA 112 -- 185@LB@Position Seed - mRNA 83 -- 89@LB@Position Seed - sRNA 113 -- 119@LB@ |
| 40 |
0.001293 |
0.1206 |
bsu13810 |
ykvS |
-11.02 |
0.206841 |
41 -- 57 |
31 -- 45 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________40________________58\n_____________|_________________|\n5'-UGU...CAAAA_______CCU_______CUAUU...CGA-3'\n______________AUUCCCC___UUUCUUU\n______________|||||||___|||||||\n______________UAAGGGG___AAAGAAA\n3'-AUU...GAGAA_______U_________CUUUA...CAA-5'\n_____________|_________________|\n_____________46________________30\n |
51 -- 57 |
31 -- 37 |
-15.5048 kcal/mol |
1.25691 kcal/mol |
5.1304 kcal/mol |
40 58@LB@ | |@LB@5'-UGU...CAAAA CCU CUAUU...CGA-3'@LB@ AUUCCCC UUUCUUU@LB@ ||||||| |||||||@LB@ UAAGGGG AAAGAAA@LB@3'-AUU...GAGAA U CUUUA...CAA-5'@LB@ | |@LB@ 46 30@LB@@LB@@LB@Energy -11.02 kcal/mol@LB@Hybridization Energy -15.5048 kcal/mol@LB@Unfolding Energy - mRNA 1.25691 kcal/mol@LB@Unfolding Energy - sRNA 5.1304 kcal/mol@LB@@LB@Position - mRNA 41 -- 57@LB@Position - sRNA 31 -- 45@LB@Position Seed - mRNA 51 -- 57@LB@Position Seed - sRNA 31 -- 37@LB@ |
| 167 |
0.007775 |
0.1751 |
bsu09889 |
yhzD |
-15.75 |
0.023145 |
43 -- 92 |
39 -- 89 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________42____________________________________________________93\n_____________|_____________________________________________________|\n5'-GGA...CUCCA____U_______AC______AAUU_______C___A____C____C_______UGACC...GUG-3'\n______________AAUG_CUUCGUU__GUGAUC____GUAAGCA__UG_AUCU__CUC___UUCCC\n______________||||_|||||||__|::|||____|:||:||__:|_|:|:__|||___|||||\n______________UUAC_GAAGCAA__CGUUAG____CGUUUGU__GC_UGGG__GAG___AAGGG\n3'-AUU...AUUAC____C_______________AAC________UA__A____UA___AAU_____GUAAA...CAA-5'\n_____________|_____________________________________________________|\n_____________90____________________________________________________38\n |
67 -- 73 |
62 -- 68 |
-30.4166 kcal/mol |
5.34264 kcal/mol |
10.926 kcal/mol |
42 93@LB@ | |@LB@5'-GGA...CUCCA U AC AAUU C A C C UGACC...GUG-3'@LB@ AAUG CUUCGUU GUGAUC GUAAGCA UG AUCU CUC UUCCC@LB@ |||| ||||||| |::||| |:||:|| :| |:|: ||| |||||@LB@ UUAC GAAGCAA CGUUAG CGUUUGU GC UGGG GAG AAGGG@LB@3'-AUU...AUUAC C AAC UA A UA AAU GUAAA...CAA-5'@LB@ | |@LB@ 90 38@LB@@LB@@LB@Energy -15.75 kcal/mol@LB@Hybridization Energy -30.4166 kcal/mol@LB@Unfolding Energy - mRNA 5.34264 kcal/mol@LB@Unfolding Energy - sRNA 10.926 kcal/mol@LB@@LB@Position - mRNA 43 -- 92@LB@Position - sRNA 39 -- 89@LB@Position Seed - mRNA 67 -- 73@LB@Position Seed - sRNA 62 -- 68@LB@ |
| 7 |
0.0001858 |
0.08823 |
bsu34210 |
yvfG |
-17.07 |
0.012126 |
85 -- 142 |
32 -- 86 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________84____________________________________________________________143\n_____________|_____________________________________________________________|\n5'-GAG...GUUGA______AAUAC___________C____GUU__A__________GCUCAC____________CAUUG...ACU-3'\n______________GGCUUU_____UUGUA__CUUG_UGAA___UC_UAUCCAUCUU______UCCCC_UUUCUU\n______________|||||:_____|||:|__||||_::||___||_||:||||||:______|||||_||||||\n______________CCGAAG_____AACGU__GAAC_GUUU___AG_AUGGGUAGAG______AGGGG_AAAGAA\n3'-AUU...ACUUA______C_________UA____C____GUU__C__________AAUA_______U______ACUUU...CAA-5'\n_____________|_____________________________________________________________|\n_____________87____________________________________________________________31\n |
119 -- 125 |
48 -- 54 |
-40.7387 kcal/mol |
11.2598 kcal/mol |
14.8836 kcal/mol |
84 143@LB@ | |@LB@5'-GAG...GUUGA AAUAC C GUU A GCUCAC CAUUG...ACU-3'@LB@ GGCUUU UUGUA CUUG UGAA UC UAUCCAUCUU UCCCC UUUCUU@LB@ |||||: |||:| |||| ::|| || ||:||||||: ||||| ||||||@LB@ CCGAAG AACGU GAAC GUUU AG AUGGGUAGAG AGGGG AAAGAA@LB@3'-AUU...ACUUA C UA C GUU C AAUA U ACUUU...CAA-5'@LB@ | |@LB@ 87 31@LB@@LB@@LB@Energy -17.07 kcal/mol@LB@Hybridization Energy -40.7387 kcal/mol@LB@Unfolding Energy - mRNA 11.2598 kcal/mol@LB@Unfolding Energy - sRNA 14.8836 kcal/mol@LB@@LB@Position - mRNA 85 -- 142@LB@Position - sRNA 32 -- 86@LB@Position Seed - mRNA 119 -- 125@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 128 |
0.005903 |
0.1741 |
bsu24110 |
yqzF |
-12.53 |
0.106013 |
93 -- 138 |
39 -- 81 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________92_______________________________________________139\n_____________|________________________________________________|\n5'-UAA...UAUUC_________AAUUU___C___CCUA___UA___CGUUUUCU_______ACAAA...UCA-3'\n______________CGUUGCAAU_____GCA_AAC____UGU__CCA________UCUCUUG\n______________|||||||||_____|||_|||____:||__|||________||||||:\n______________GCAACGUUA_____CGU_UUG____GCA__GGU________AGAGAAU\n3'-AUU...CCGAA_________GAAC________UUA____UG__________________AAGGG...CAA-5'\n_____________|________________________________________________|\n_____________82_______________________________________________38\n |
134 -- 140 |
45 -- 51 |
-26.5343 kcal/mol |
8.17713 kcal/mol |
8.56905 kcal/mol |
92 139@LB@ | |@LB@5'-UAA...UAUUC AAUUU C CCUA UA CGUUUUCU ACAAA...UCA-3'@LB@ CGUUGCAAU GCA AAC UGU CCA UCUCUUG@LB@ ||||||||| ||| ||| :|| ||| ||||||:@LB@ GCAACGUUA CGU UUG GCA GGU AGAGAAU@LB@3'-AUU...CCGAA GAAC UUA UG AAGGG...CAA-5'@LB@ | |@LB@ 82 38@LB@@LB@@LB@Energy -12.53 kcal/mol@LB@Hybridization Energy -26.5343 kcal/mol@LB@Unfolding Energy - mRNA 8.17713 kcal/mol@LB@Unfolding Energy - sRNA 8.56905 kcal/mol@LB@@LB@Position - mRNA 93 -- 138@LB@Position - sRNA 39 -- 81@LB@Position Seed - mRNA 134 -- 140@LB@Position Seed - sRNA 45 -- 51@LB@ |
| 136 |
0.006329 |
0.1741 |
bsu10210 |
yhfF |
-9.29 |
0.409483 |
117 -- 143 |
37 -- 59 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________116______________144\n_____________|________________|\n5'-AUA...GACGC_______GCA______CGCAC...CCA-3'\n______________UUCCCAU___UUUGAA\n______________|:|||||___||||||\n______________AGGGGUA___AAACUU\n3'-AUU...GAAUA_______AAG______UAAAC...CAA-5'\n_____________|________________|\n_____________60_______________36\n |
101 -- 107 |
37 -- 43 |
-14.7282 kcal/mol |
3.20386 kcal/mol |
5.02573 kcal/mol |
116 144@LB@ | |@LB@5'-AUA...GACGC GCA CGCAC...CCA-3'@LB@ UUCCCAU UUUGAA@LB@ |:||||| ||||||@LB@ AGGGGUA AAACUU@LB@3'-AUU...GAAUA AAG UAAAC...CAA-5'@LB@ | |@LB@ 60 36@LB@@LB@@LB@Energy -9.29 kcal/mol@LB@Hybridization Energy -14.7282 kcal/mol@LB@Unfolding Energy - mRNA 3.20386 kcal/mol@LB@Unfolding Energy - sRNA 5.02573 kcal/mol@LB@@LB@Position - mRNA 117 -- 143@LB@Position - sRNA 37 -- 59@LB@Position Seed - mRNA 101 -- 107@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 80 |
0.002732 |
0.1323 |
bsu14790 |
ylaI |
-9.42 |
0.391167 |
138 -- 189 |
118 -- 178 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________137____________________________________________________190\n_____________|______________________________________________________|\n5'-AGA...CUUUA_______C___UUUU_____GCUUC____A_________UAAUA____U_____AAAGA...AUA-3'\n______________GCUUUUU_UUA____GGACA_______UG_UCCGUGGUA_____CAUG_UAGUG\n______________:||:||:_|:|____|||||_______||_||||::|:|_____|||:_||:||\n______________UGAGAAG_AGU____CCUGU_______AC_AGGCGUCGU_____GUAU_AUUAC\n3'-AUU...AAAAA_______U___UGU______AACUGUA____________UCAAG__________AACAG...CAA-5'\n_____________|______________________________________________________|\n_____________179____________________________________________________117\n |
167 -- 173 |
133 -- 139 |
-31.618 kcal/mol |
11.7219 kcal/mol |
10.6253 kcal/mol |
137 190@LB@ | |@LB@5'-AGA...CUUUA C UUUU GCUUC A UAAUA U AAAGA...AUA-3'@LB@ GCUUUUU UUA GGACA UG UCCGUGGUA CAUG UAGUG@LB@ :||:||: |:| ||||| || ||||::|:| |||: ||:||@LB@ UGAGAAG AGU CCUGU AC AGGCGUCGU GUAU AUUAC@LB@3'-AUU...AAAAA U UGU AACUGUA UCAAG AACAG...CAA-5'@LB@ | |@LB@ 179 117@LB@@LB@@LB@Energy -9.42 kcal/mol@LB@Hybridization Energy -31.618 kcal/mol@LB@Unfolding Energy - mRNA 11.7219 kcal/mol@LB@Unfolding Energy - sRNA 10.6253 kcal/mol@LB@@LB@Position - mRNA 138 -- 189@LB@Position - sRNA 118 -- 178@LB@Position Seed - mRNA 167 -- 173@LB@Position Seed - sRNA 133 -- 139@LB@ |
| 187 |
0.008608 |
0.1751 |
bsu17960 |
yneK |
-9.96 |
0.317804 |
143 -- 172 |
155 -- 184 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________142___________173\n_____________|_____________|\n5'-AGU...AAUCU________AU___AUAUG...UAA-3'\n______________CUCUUCGU__ACA\n______________||||||:|__|||\n______________GAGAAGUA__UGU\n3'-AUU...AAAAU________GU___CCUGU...CAA-5'\n_____________|_____________|\n_____________185___________154\n |
161 -- 167 |
160 -- 166 |
-12.096 kcal/mol |
1.39305 kcal/mol |
1.41024 kcal/mol |
142 173@LB@ | |@LB@5'-AGU...AAUCU AU AUAUG...UAA-3'@LB@ CUCUUCGU ACA@LB@ ||||||:| |||@LB@ GAGAAGUA UGU@LB@3'-AUU...AAAAU GU CCUGU...CAA-5'@LB@ | |@LB@ 185 154@LB@@LB@@LB@Energy -9.96 kcal/mol@LB@Hybridization Energy -12.096 kcal/mol@LB@Unfolding Energy - mRNA 1.39305 kcal/mol@LB@Unfolding Energy - sRNA 1.41024 kcal/mol@LB@@LB@Position - mRNA 143 -- 172@LB@Position - sRNA 155 -- 184@LB@Position Seed - mRNA 161 -- 167@LB@Position Seed - sRNA 160 -- 166@LB@ |
| 137 |
0.006339 |
0.1741 |
bsu39320 |
yxiB |
-11.20 |
0.191268 |
188 -- 222 |
111 -- 147 |
Evidence 4: Homologs of previously reported genes of unknown function |
|
_____________187_________________________223\n_____________|___________________________|\n5'-UAA...GUGUU______UGCAUA___A___________AUUCG...AAA-3'\n______________GCGGCA______GUG_AAUGUUGUUAC\n______________||:|||______:|:_||||||||:||\n______________CGUCGU______UAU_UUACAACAGUG\n3'-AUU...ACAGG______UCAAGG___A___________AAAGA...CAA-5'\n_____________|___________________________|\n_____________148_________________________110\n |
216 -- 222 |
111 -- 117 |
-23.3412 kcal/mol |
7.76229 kcal/mol |
5.28835 kcal/mol |
187 223@LB@ | |@LB@5'-UAA...GUGUU UGCAUA A AUUCG...AAA-3'@LB@ GCGGCA GUG AAUGUUGUUAC@LB@ ||:||| :|: ||||||||:||@LB@ CGUCGU UAU UUACAACAGUG@LB@3'-AUU...ACAGG UCAAGG A AAAGA...CAA-5'@LB@ | |@LB@ 148 110@LB@@LB@@LB@Energy -11.20 kcal/mol@LB@Hybridization Energy -23.3412 kcal/mol@LB@Unfolding Energy - mRNA 7.76229 kcal/mol@LB@Unfolding Energy - sRNA 5.28835 kcal/mol@LB@@LB@Position - mRNA 188 -- 222@LB@Position - sRNA 111 -- 147@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 111 -- 117@LB@ |
