151 |
0.03043 |
0.6177 |
b3081 |
fadH |
-8.56 |
0.080347 |
290 -- 297 |
43 -- 50 |
2 4-dienoyl-CoA reductase NADH and FMN-linked |
|
_____________289______298\n_____________|________|\n5'-UGG...GGGCU________ACC-3'\n______________GGAGGAAU\n______________:|||||||\n______________UCUCCUUA\n3'-UUU...CAGUU________AAGUA...ACA-5'\n_____________|________|\n_____________51_______42\n |
291 -- 297 |
43 -- 49 |
-10.5858 kcal/mol |
1.17616 kcal/mol |
0.845564 kcal/mol |
289 298@LB@ | |@LB@5'-UGG...GGGCU ACC-3'@LB@ GGAGGAAU@LB@ :|||||||@LB@ UCUCCUUA@LB@3'-UUU...CAGUU AAGUA...ACA-5'@LB@ | |@LB@ 51 42@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -10.5858 kcal/mol@LB@Unfolding Energy - mRNA 1.17616 kcal/mol@LB@Unfolding Energy - sRNA 0.845564 kcal/mol@LB@@LB@Position - mRNA 290 -- 297@LB@Position - sRNA 43 -- 50@LB@Position Seed - mRNA 291 -- 297@LB@Position Seed - sRNA 43 -- 49@LB@ |
155 |
0.03087 |
0.6177 |
b1003 |
yccJ |
-9.03 |
0.064630 |
130 -- 145 |
43 -- 56 |
uncharacterized protein |
|
_____________129______________146\n_____________|________________|\n5'-CCU...UUGCU_____UC_________AUGUC...GGU-3'\n______________CGUUA__AAGGGGAAU\n______________|||:|__|||:|||||\n______________GCAGU__UUCUCCUUA\n3'-UUU...ACCGG________________AAGUA...ACA-5'\n_____________|________________|\n_____________57_______________42\n |
139 -- 145 |
43 -- 49 |
-13.8314 kcal/mol |
3.84343 kcal/mol |
0.953958 kcal/mol |
129 146@LB@ | |@LB@5'-CCU...UUGCU UC AUGUC...GGU-3'@LB@ CGUUA AAGGGGAAU@LB@ |||:| |||:|||||@LB@ GCAGU UUCUCCUUA@LB@3'-UUU...ACCGG AAGUA...ACA-5'@LB@ | |@LB@ 57 42@LB@@LB@@LB@Energy -9.03 kcal/mol@LB@Hybridization Energy -13.8314 kcal/mol@LB@Unfolding Energy - mRNA 3.84343 kcal/mol@LB@Unfolding Energy - sRNA 0.953958 kcal/mol@LB@@LB@Position - mRNA 130 -- 145@LB@Position - sRNA 43 -- 56@LB@Position Seed - mRNA 139 -- 145@LB@Position Seed - sRNA 43 -- 49@LB@ |
156 |
0.03128 |
0.6177 |
b4512 |
ybdD |
-7.87 |
0.110479 |
26 -- 38 |
43 -- 55 |
DUF466 family protein |
|
_____________25____________39\n_____________|_____________|\n5'-GCA...UCAGA__G__________GUUGG...GGG-3'\n______________GU_AGGGGGGGAU\n______________||_|::|:||:||\n______________CA_UUUCUCCUUA\n3'-UUU...CCGGG__G__________AAGUA...ACA-5'\n_____________|_____________|\n_____________56____________42\n |
32 -- 38 |
43 -- 49 |
-14.3671 kcal/mol |
5.55181 kcal/mol |
0.946481 kcal/mol |
25 39@LB@ | |@LB@5'-GCA...UCAGA G GUUGG...GGG-3'@LB@ GU AGGGGGGGAU@LB@ || |::|:||:||@LB@ CA UUUCUCCUUA@LB@3'-UUU...CCGGG G AAGUA...ACA-5'@LB@ | |@LB@ 56 42@LB@@LB@@LB@Energy -7.87 kcal/mol@LB@Hybridization Energy -14.3671 kcal/mol@LB@Unfolding Energy - mRNA 5.55181 kcal/mol@LB@Unfolding Energy - sRNA 0.946481 kcal/mol@LB@@LB@Position - mRNA 26 -- 38@LB@Position - sRNA 43 -- 55@LB@Position Seed - mRNA 32 -- 38@LB@Position Seed - sRNA 43 -- 49@LB@ |
173 |
0.03478 |
0.6177 |
b1234 |
rssA |
-4.70 |
0.418234 |
181 -- 188 |
43 -- 50 |
putative patatin-like family phospholipase |
|
_____________180______189\n_____________|________|\n5'-GAU...AUUCC________CUUGC...AAA-3'\n______________AGGGGAAU\n______________||:|||||\n______________UCUCCUUA\n3'-UUU...CAGUU________AAGUA...ACA-5'\n_____________|________|\n_____________51_______42\n |
182 -- 188 |
43 -- 49 |
-9.05148 kcal/mol |
3.5051 kcal/mol |
0.845564 kcal/mol |
180 189@LB@ | |@LB@5'-GAU...AUUCC CUUGC...AAA-3'@LB@ AGGGGAAU@LB@ ||:|||||@LB@ UCUCCUUA@LB@3'-UUU...CAGUU AAGUA...ACA-5'@LB@ | |@LB@ 51 42@LB@@LB@@LB@Energy -4.70 kcal/mol@LB@Hybridization Energy -9.05148 kcal/mol@LB@Unfolding Energy - mRNA 3.5051 kcal/mol@LB@Unfolding Energy - sRNA 0.845564 kcal/mol@LB@@LB@Position - mRNA 181 -- 188@LB@Position - sRNA 43 -- 50@LB@Position Seed - mRNA 182 -- 188@LB@Position Seed - sRNA 43 -- 49@LB@ |
181 |
0.03769 |
0.6177 |
b0912 |
ihfB |
-7.34 |
0.140491 |
192 -- 199 |
43 -- 50 |
integration host factor (IHF) DNA-binding protein beta subunit |
|
_____________191______200\n_____________|________|\n5'-ACG...GAACC________CAUGA...UGG-3'\n______________GGAGGAAU\n______________:|||||||\n______________UCUCCUUA\n3'-UUU...CAGUU________AAGUA...ACA-5'\n_____________|________|\n_____________51_______42\n |
193 -- 199 |
43 -- 49 |
-10.3812 kcal/mol |
2.20002 kcal/mol |
0.845564 kcal/mol |
191 200@LB@ | |@LB@5'-ACG...GAACC CAUGA...UGG-3'@LB@ GGAGGAAU@LB@ :|||||||@LB@ UCUCCUUA@LB@3'-UUU...CAGUU AAGUA...ACA-5'@LB@ | |@LB@ 51 42@LB@@LB@@LB@Energy -7.34 kcal/mol@LB@Hybridization Energy -10.3812 kcal/mol@LB@Unfolding Energy - mRNA 2.20002 kcal/mol@LB@Unfolding Energy - sRNA 0.845564 kcal/mol@LB@@LB@Position - mRNA 192 -- 199@LB@Position - sRNA 43 -- 50@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 43 -- 49@LB@ |
197 |
0.04129 |
0.6177 |
b1205 |
ychH |
-8.72 |
0.074776 |
153 -- 162 |
43 -- 52 |
DUF2583 family putative inner membrane protein |
|
_____________152________163\n_____________|__________|\n5'-CAA...AUAAG__________AUUCC...UAC-3'\n______________GAAGAGGGGU\n______________:||||||::|\n______________UUUCUCCUUA\n3'-UUU...GGCAG__________AAGUA...ACA-5'\n_____________|__________|\n_____________53_________42\n |
156 -- 162 |
43 -- 49 |
-11.7568 kcal/mol |
2.17132 kcal/mol |
0.865937 kcal/mol |
152 163@LB@ | |@LB@5'-CAA...AUAAG AUUCC...UAC-3'@LB@ GAAGAGGGGU@LB@ :||||||::|@LB@ UUUCUCCUUA@LB@3'-UUU...GGCAG AAGUA...ACA-5'@LB@ | |@LB@ 53 42@LB@@LB@@LB@Energy -8.72 kcal/mol@LB@Hybridization Energy -11.7568 kcal/mol@LB@Unfolding Energy - mRNA 2.17132 kcal/mol@LB@Unfolding Energy - sRNA 0.865937 kcal/mol@LB@@LB@Position - mRNA 153 -- 162@LB@Position - sRNA 43 -- 52@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 43 -- 49@LB@ |
8 |
0.001474 |
0.5928 |
b1048 |
opgG |
-11.67 |
0.018726 |
159 -- 168 |
44 -- 53 |
OPG biosynthetic periplasmic beta-1 6 branching glycosyltransferase |
|
_____________158________169\n_____________|__________|\n5'-ACA...GCACA__________AGUGC...AAU-3'\n______________CAAAGGGGGA\n______________|||||:||:|\n______________GUUUCUCCUU\n3'-UUU...GGGCA__________AAAGU...ACA-5'\n_____________|__________|\n_____________54_________43\n |
162 -- 168 |
44 -- 50 |
-12.9473 kcal/mol |
0.352192 kcal/mol |
0.927997 kcal/mol |
158 169@LB@ | |@LB@5'-ACA...GCACA AGUGC...AAU-3'@LB@ CAAAGGGGGA@LB@ |||||:||:|@LB@ GUUUCUCCUU@LB@3'-UUU...GGGCA AAAGU...ACA-5'@LB@ | |@LB@ 54 43@LB@@LB@@LB@Energy -11.67 kcal/mol@LB@Hybridization Energy -12.9473 kcal/mol@LB@Unfolding Energy - mRNA 0.352192 kcal/mol@LB@Unfolding Energy - sRNA 0.927997 kcal/mol@LB@@LB@Position - mRNA 159 -- 168@LB@Position - sRNA 44 -- 53@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 44 -- 50@LB@ |
9 |
0.001801 |
0.593 |
b1276 |
acnA |
-10.22 |
0.037037 |
184 -- 198 |
44 -- 55 |
aconitate hydratase 1; aconitase A |
|
_____________183_____________199\n_____________|_______________|\n5'-CUU...ACCCU____UUA________CUAUG...GCG-3'\n______________GUCA___AGGAGGAG\n______________||||___|:|||||:\n______________CAGU___UUCUCCUU\n3'-UUU...CCGGG_______________AAAGU...ACA-5'\n_____________|_______________|\n_____________56______________43\n |
192 -- 198 |
44 -- 50 |
-13.3918 kcal/mol |
2.22696 kcal/mol |
0.941432 kcal/mol |
183 199@LB@ | |@LB@5'-CUU...ACCCU UUA CUAUG...GCG-3'@LB@ GUCA AGGAGGAG@LB@ |||| |:|||||:@LB@ CAGU UUCUCCUU@LB@3'-UUU...CCGGG AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -10.22 kcal/mol@LB@Hybridization Energy -13.3918 kcal/mol@LB@Unfolding Energy - mRNA 2.22696 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 184 -- 198@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 44 -- 50@LB@ |
11 |
0.002274 |
0.593 |
b1476 |
fdnI |
-10.73 |
0.029150 |
152 -- 175 |
44 -- 69 |
formate dehydrogenase-N cytochrome B556 (gamma) subunit nitrate-inducible |
|
_____________151________________________176\n_____________|__________________________|\n5'-CGU...ACUAC____G______________UA_____GUGGA...UUU-3'\n______________AUCG_UAUUGGCCCG__AA__AGGAA\n______________||||_||||||||||__||__|||||\n______________UAGC_AUAACCGGGC__UU__UCCUU\n3'-UUU...GGUUA____G__________AG__UC_____AAAGU...ACA-5'\n_____________|__________________________|\n_____________70_________________________43\n |
160 -- 166 |
55 -- 61 |
-29.2423 kcal/mol |
7.20098 kcal/mol |
11.3099 kcal/mol |
151 176@LB@ | |@LB@5'-CGU...ACUAC G UA GUGGA...UUU-3'@LB@ AUCG UAUUGGCCCG AA AGGAA@LB@ |||| |||||||||| || |||||@LB@ UAGC AUAACCGGGC UU UCCUU@LB@3'-UUU...GGUUA G AG UC AAAGU...ACA-5'@LB@ | |@LB@ 70 43@LB@@LB@@LB@Energy -10.73 kcal/mol@LB@Hybridization Energy -29.2423 kcal/mol@LB@Unfolding Energy - mRNA 7.20098 kcal/mol@LB@Unfolding Energy - sRNA 11.3099 kcal/mol@LB@@LB@Position - mRNA 152 -- 175@LB@Position - sRNA 44 -- 69@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 55 -- 61@LB@ |
13 |
0.003065 |
0.593 |
b4529 |
ydbJ |
-10.82 |
0.027981 |
161 -- 194 |
44 -- 78 |
DUF333 family putative lipoprotein |
|
_____________160___________________________________195\n_____________|_____________________________________|\n5'-GCA...UAUUU________________________AA__UC_______GAAAA...GUU-3'\n______________AUGG_CGGUGUCGU__UUGGCUUG__GA__AGAGGAA\n______________||||_|::|:|||:__|||||::|__:|__|||||||\n______________UACC_GUUAUAGCG__AACCGGGC__UU__UCUCCUU\n_____3'-UUUUUU____G_________AU________AG___________AAAGU...ACA-5'\n_____________|_____________________________________|\n_____________79____________________________________43\n |
188 -- 194 |
44 -- 50 |
-34.9495 kcal/mol |
10.5981 kcal/mol |
13.5333 kcal/mol |
160 195@LB@ | |@LB@5'-GCA...UAUUU AA UC GAAAA...GUU-3'@LB@ AUGG CGGUGUCGU UUGGCUUG GA AGAGGAA@LB@ |||| |::|:|||: |||||::| :| |||||||@LB@ UACC GUUAUAGCG AACCGGGC UU UCUCCUU@LB@ 3'-UUUUUU G AU AG AAAGU...ACA-5'@LB@ | |@LB@ 79 43@LB@@LB@@LB@Energy -10.82 kcal/mol@LB@Hybridization Energy -34.9495 kcal/mol@LB@Unfolding Energy - mRNA 10.5981 kcal/mol@LB@Unfolding Energy - sRNA 13.5333 kcal/mol@LB@@LB@Position - mRNA 161 -- 194@LB@Position - sRNA 44 -- 78@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 44 -- 50@LB@ |