81 |
0.004478 |
0.1855 |
b3327 |
gspF |
-8.77 |
0.233220 |
243 -- 251 |
26 -- 34 |
general secretory pathway component cryptic |
|
_____________242_______252\n_____________|_________|\n5'-AUG...AAAAA_________AUCAU...AAG-3'\n______________UUGCAAGGG\n______________||:||||||\n______________AAUGUUCCC\n3'-UUU...UACUC_________GUGUC...GUG-5'\n_____________|_________|\n_____________35________25\n |
245 -- 251 |
26 -- 32 |
-12.3281 kcal/mol |
0.874927 kcal/mol |
2.67841 kcal/mol |
242 252@LB@ | |@LB@5'-AUG...AAAAA AUCAU...AAG-3'@LB@ UUGCAAGGG@LB@ ||:||||||@LB@ AAUGUUCCC@LB@3'-UUU...UACUC GUGUC...GUG-5'@LB@ | |@LB@ 35 25@LB@@LB@@LB@Energy -8.77 kcal/mol@LB@Hybridization Energy -12.3281 kcal/mol@LB@Unfolding Energy - mRNA 0.874927 kcal/mol@LB@Unfolding Energy - sRNA 2.67841 kcal/mol@LB@@LB@Position - mRNA 243 -- 251@LB@Position - sRNA 26 -- 34@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 26 -- 32@LB@ |
82 |
0.004565 |
0.1855 |
b4144 |
yjeI |
-10.12 |
0.132253 |
163 -- 240 |
1 -- 93 |
DUF4156 family lipoprotein |
|
_____________162_____________________________________________________________________________________________________241\n_____________|_______________________________________________________________________________________________________|\n5'-GCA...GACGA_____________U_________UUGAUUAU_______AACA_____A_______A________________UUA____G_______________U_______UACUG...GCA-3'\n______________CGCGAGUG__GCG_CCAGC_UCA________GGGGAAU______UGC__CGUAAA______________UAC____GCA_GG_AUUG____UCGG_GCCGCGC\n______________|||||:|:__|||_|||:|_:||________|||:|||______|||__||||||______________|||____|||_:|_|:||____||:|_|||||:|\n______________GCGCUUAU__CGC_GGUUG_GGU________CCCUUUA______ACG__GCAUUU______________AUG____CGU_UC_UGAC____AGUC_CGGCGUG\n3'-UUU...CCCAC________GA_________U__________________GAACCG___CG______AAUAAUACUACUCA___UUCC___G__G____AAAA____________-5'\n_____________|______________________________________________________________________________________________________|\n_____________94_____________________________________________________________________________________________________1\n |
234 -- 240 |
1 -- 7 |
-61.0049 kcal/mol |
21.8834 kcal/mol |
29.0051 kcal/mol |
162 241@LB@ | |@LB@5'-GCA...GACGA U UUGAUUAU AACA A A UUA G U UACUG...GCA-3'@LB@ CGCGAGUG GCG CCAGC UCA GGGGAAU UGC CGUAAA UAC GCA GG AUUG UCGG GCCGCGC@LB@ |||||:|: ||| |||:| :|| |||:||| ||| |||||| ||| ||| :| |:|| ||:| |||||:|@LB@ GCGCUUAU CGC GGUUG GGU CCCUUUA ACG GCAUUU AUG CGU UC UGAC AGUC CGGCGUG@LB@3'-UUU...CCCAC GA U GAACCG CG AAUAAUACUACUCA UUCC G G AAAA -5'@LB@ | |@LB@ 94 1@LB@@LB@@LB@Energy -10.12 kcal/mol@LB@Hybridization Energy -61.0049 kcal/mol@LB@Unfolding Energy - mRNA 21.8834 kcal/mol@LB@Unfolding Energy - sRNA 29.0051 kcal/mol@LB@@LB@Position - mRNA 163 -- 240@LB@Position - sRNA 1 -- 93@LB@Position Seed - mRNA 234 -- 240@LB@Position Seed - sRNA 1 -- 7@LB@ |
83 |
0.004611 |
0.1855 |
b1593 |
ynfK |
-13.15 |
0.034145 |
276 -- 295 |
66 -- 83 |
putative dethiobiotin synthetase |
|
_____________275__________________296\n_____________|____________________|\n5'-CAC...UACAA________CUC_________AACGG-3'\n______________GCGUUAGC___CCAGGGAAA\n______________|||::|:|___|||||||||\n______________CGCGGUUG___GGUCCCUUU\n3'-UUU...UAUGA________U___________AGAAC...GUG-5'\n_____________|____________________|\n_____________84___________________65\n |
289 -- 295 |
66 -- 72 |
-26.3491 kcal/mol |
5.84339 kcal/mol |
7.35847 kcal/mol |
275 296@LB@ | |@LB@5'-CAC...UACAA CUC AACGG-3'@LB@ GCGUUAGC CCAGGGAAA@LB@ |||::|:| |||||||||@LB@ CGCGGUUG GGUCCCUUU@LB@3'-UUU...UAUGA U AGAAC...GUG-5'@LB@ | |@LB@ 84 65@LB@@LB@@LB@Energy -13.15 kcal/mol@LB@Hybridization Energy -26.3491 kcal/mol@LB@Unfolding Energy - mRNA 5.84339 kcal/mol@LB@Unfolding Energy - sRNA 7.35847 kcal/mol@LB@@LB@Position - mRNA 276 -- 295@LB@Position - sRNA 66 -- 83@LB@Position Seed - mRNA 289 -- 295@LB@Position Seed - sRNA 66 -- 72@LB@ |
84 |
0.004676 |
0.1855 |
b0526 |
cysS |
-14.43 |
0.019007 |
256 -- 269 |
64 -- 77 |
cysteinyl-tRNA synthetase |
|
_____________255____________270\n_____________|______________|\n5'-GCC...UAUUC______________GGCAU...ACG-3'\n______________ACGCCGGGGAAGUC\n______________||:||:|||||:||\n______________UGUGGUCCCUUUAG\n3'-UUU...GCGGU______________AACCG...GUG-5'\n_____________|______________|\n_____________78_____________63\n |
263 -- 269 |
64 -- 70 |
-23.2043 kcal/mol |
4.03864 kcal/mol |
4.72709 kcal/mol |
255 270@LB@ | |@LB@5'-GCC...UAUUC GGCAU...ACG-3'@LB@ ACGCCGGGGAAGUC@LB@ ||:||:|||||:||@LB@ UGUGGUCCCUUUAG@LB@3'-UUU...GCGGU AACCG...GUG-5'@LB@ | |@LB@ 78 63@LB@@LB@@LB@Energy -14.43 kcal/mol@LB@Hybridization Energy -23.2043 kcal/mol@LB@Unfolding Energy - mRNA 4.03864 kcal/mol@LB@Unfolding Energy - sRNA 4.72709 kcal/mol@LB@@LB@Position - mRNA 256 -- 269@LB@Position - sRNA 64 -- 77@LB@Position Seed - mRNA 263 -- 269@LB@Position Seed - sRNA 64 -- 70@LB@ |
85 |
0.004761 |
0.1855 |
b2077 |
iceT |
-11.46 |
0.073016 |
53 -- 74 |
64 -- 86 |
putative citrate/iron-citrate/zinc-citrate efflux transporter |
|
_____________52______________________75\n_____________|_______________________|\n5'-CGG...UCGGA______G_______CU_______ACCAU...UUC-3'\n______________GCUGCG_CAAC_CC__GGGGAUC\n______________:|||||_||||_||__||::|||\n______________UGACGC_GUUG_GG__CCUUUAG\n3'-UUU...GCUUA______G____U__UC_______AACCG...GUG-5'\n_____________|_______________________|\n_____________87______________________63\n |
68 -- 74 |
64 -- 70 |
-29.0378 kcal/mol |
10.1908 kcal/mol |
7.38435 kcal/mol |
52 75@LB@ | |@LB@5'-CGG...UCGGA G CU ACCAU...UUC-3'@LB@ GCUGCG CAAC CC GGGGAUC@LB@ :||||| |||| || ||::|||@LB@ UGACGC GUUG GG CCUUUAG@LB@3'-UUU...GCUUA G U UC AACCG...GUG-5'@LB@ | |@LB@ 87 63@LB@@LB@@LB@Energy -11.46 kcal/mol@LB@Hybridization Energy -29.0378 kcal/mol@LB@Unfolding Energy - mRNA 10.1908 kcal/mol@LB@Unfolding Energy - sRNA 7.38435 kcal/mol@LB@@LB@Position - mRNA 53 -- 74@LB@Position - sRNA 64 -- 86@LB@Position Seed - mRNA 68 -- 74@LB@Position Seed - sRNA 64 -- 70@LB@ |
86 |
0.004777 |
0.1855 |
b3157 |
yhbT |
-11.83 |
0.061936 |
277 -- 294 |
70 -- 85 |
SCP-2 sterol transfer family protein |
|
_____________276________________295\n_____________|__________________|\n5'-CUG...GCCAU________AA________UUCUUG-3'\n______________UUGCGCUA__ACGCCAGG\n______________:|||||:|__||:|||||\n______________GACGCGGU__UGUGGUCC\n3'-UUU...CUUAU__________________CUUUA...GUG-5'\n_____________|__________________|\n_____________86_________________69\n |
288 -- 294 |
70 -- 76 |
-24.8001 kcal/mol |
5.69349 kcal/mol |
7.27689 kcal/mol |
276 295@LB@ | |@LB@5'-CUG...GCCAU AA UUCUUG-3'@LB@ UUGCGCUA ACGCCAGG@LB@ :|||||:| ||:|||||@LB@ GACGCGGU UGUGGUCC@LB@3'-UUU...CUUAU CUUUA...GUG-5'@LB@ | |@LB@ 86 69@LB@@LB@@LB@Energy -11.83 kcal/mol@LB@Hybridization Energy -24.8001 kcal/mol@LB@Unfolding Energy - mRNA 5.69349 kcal/mol@LB@Unfolding Energy - sRNA 7.27689 kcal/mol@LB@@LB@Position - mRNA 277 -- 294@LB@Position - sRNA 70 -- 85@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 70 -- 76@LB@ |
87 |
0.004792 |
0.1855 |
b0476 |
aes |
-9.71 |
0.157345 |
34 -- 55 |
56 -- 76 |
acetyl esterase |
|
_____________33______________________56\n_____________|_______________________|\n5'-CGU...ACGUU______________CA_______UUUUA...CAA-3'\n______________UACC_GGGAAAUUU__UGGUUGU\n______________:|||_|||||||:|__|||:||:\n______________GUGG_CCCUUUAGA__ACCGACG\n3'-UUU...CGGUU____U__________________CGGCA...GUG-5'\n_____________|_______________________|\n_____________77______________________55\n |
49 -- 55 |
56 -- 62 |
-24.1621 kcal/mol |
6.04137 kcal/mol |
8.40711 kcal/mol |
33 56@LB@ | |@LB@5'-CGU...ACGUU CA UUUUA...CAA-3'@LB@ UACC GGGAAAUUU UGGUUGU@LB@ :||| |||||||:| |||:||:@LB@ GUGG CCCUUUAGA ACCGACG@LB@3'-UUU...CGGUU U CGGCA...GUG-5'@LB@ | |@LB@ 77 55@LB@@LB@@LB@Energy -9.71 kcal/mol@LB@Hybridization Energy -24.1621 kcal/mol@LB@Unfolding Energy - mRNA 6.04137 kcal/mol@LB@Unfolding Energy - sRNA 8.40711 kcal/mol@LB@@LB@Position - mRNA 34 -- 55@LB@Position - sRNA 56 -- 76@LB@Position Seed - mRNA 49 -- 55@LB@Position Seed - sRNA 56 -- 62@LB@ |
88 |
0.004799 |
0.1855 |
b2213 |
ada |
-9.32 |
0.185618 |
222 -- 245 |
63 -- 86 |
fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase |
|
_____________221________________________246\n_____________|__________________________|\n5'-GGA...GCUUA____A__A__________C_______GUCUU...CCA-3'\n______________ACUG_CG_UCAACGCUGG___AAUCU\n______________||||_||_:||||:|::|___|||||\n______________UGAC_GC_GGUUGUGGUC___UUAGA\n3'-UUU...GCUUA__________________CCU_____ACCGA...GUG-5'\n_____________|__________________________|\n_____________87_________________________62\n |
233 -- 239 |
71 -- 77 |
-21.7615 kcal/mol |
5.05104 kcal/mol |
7.38602 kcal/mol |
221 246@LB@ | |@LB@5'-GGA...GCUUA A A C GUCUU...CCA-3'@LB@ ACUG CG UCAACGCUGG AAUCU@LB@ |||| || :||||:|::| |||||@LB@ UGAC GC GGUUGUGGUC UUAGA@LB@3'-UUU...GCUUA CCU ACCGA...GUG-5'@LB@ | |@LB@ 87 62@LB@@LB@@LB@Energy -9.32 kcal/mol@LB@Hybridization Energy -21.7615 kcal/mol@LB@Unfolding Energy - mRNA 5.05104 kcal/mol@LB@Unfolding Energy - sRNA 7.38602 kcal/mol@LB@@LB@Position - mRNA 222 -- 245@LB@Position - sRNA 63 -- 86@LB@Position Seed - mRNA 233 -- 239@LB@Position Seed - sRNA 71 -- 77@LB@ |
89 |
0.004811 |
0.1855 |
b4336 |
yjiN |
-13.14 |
0.034257 |
120 -- 134 |
70 -- 84 |
zinc-type alcohol dehydrogenase-like protein |
|
_____________119_____________135\n_____________|_______________|\n5'-GGU...UCGCG_______________CAGCC...CCA-3'\n______________UGCGCCAGCAUCAGG\n______________|||||||:||:||||\n______________ACGCGGUUGUGGUCC\n3'-UUU...UUAUG_______________CUUUA...GUG-5'\n_____________|_______________|\n_____________85______________69\n |
128 -- 134 |
70 -- 76 |
-28.7852 kcal/mol |
8.39668 kcal/mol |
7.24859 kcal/mol |
119 135@LB@ | |@LB@5'-GGU...UCGCG CAGCC...CCA-3'@LB@ UGCGCCAGCAUCAGG@LB@ |||||||:||:||||@LB@ ACGCGGUUGUGGUCC@LB@3'-UUU...UUAUG CUUUA...GUG-5'@LB@ | |@LB@ 85 69@LB@@LB@@LB@Energy -13.14 kcal/mol@LB@Hybridization Energy -28.7852 kcal/mol@LB@Unfolding Energy - mRNA 8.39668 kcal/mol@LB@Unfolding Energy - sRNA 7.24859 kcal/mol@LB@@LB@Position - mRNA 120 -- 134@LB@Position - sRNA 70 -- 84@LB@Position Seed - mRNA 128 -- 134@LB@Position Seed - sRNA 70 -- 76@LB@ |
90 |
0.004828 |
0.1855 |
b2149 |
mglA |
-7.32 |
0.409352 |
216 -- 239 |
61 -- 86 |
methyl-galactoside ABC transporter ATPase |
|
_____________215________________________240\n_____________|__________________________|\n5'-CGA...CAACG___C____CU__________UA____UUGGA...AUU-3'\n______________ACU_CGUC____CCGGGGAA__CUUG\n______________|||_||:|____||:|||||__||||\n______________UGA_GCGG____GGUCCCUU__GAAC\n3'-UUU...GCUUA___C____UUGU________UA____CGACG...GUG-5'\n_____________|__________________________|\n_____________87_________________________60\n |
227 -- 233 |
67 -- 73 |
-23.5814 kcal/mol |
8.829 kcal/mol |
7.43637 kcal/mol |
215 240@LB@ | |@LB@5'-CGA...CAACG C CU UA UUGGA...AUU-3'@LB@ ACU CGUC CCGGGGAA CUUG@LB@ ||| ||:| ||:||||| ||||@LB@ UGA GCGG GGUCCCUU GAAC@LB@3'-UUU...GCUUA C UUGU UA CGACG...GUG-5'@LB@ | |@LB@ 87 60@LB@@LB@@LB@Energy -7.32 kcal/mol@LB@Hybridization Energy -23.5814 kcal/mol@LB@Unfolding Energy - mRNA 8.829 kcal/mol@LB@Unfolding Energy - sRNA 7.43637 kcal/mol@LB@@LB@Position - mRNA 216 -- 239@LB@Position - sRNA 61 -- 86@LB@Position Seed - mRNA 227 -- 233@LB@Position Seed - sRNA 67 -- 73@LB@ |