| 151 |
0.01116 |
0.2504 |
b0903 |
pflB |
-10.70 |
0.211701 |
140 -- 166 |
4 -- 34 |
formate C-acetyltransferase 1 anaerobic; pyruvate formate-lyase 1 |
|
_____________139_____________________________167\n_____________|_______________________________|\n5'-CAC...GACCA____U______U__________UAC______AAAUA...ACU-3'\n______________CCAU__AAUGG___UGUCGAAG____GCAGU\n______________|||:__|||||___::||:|||____|||||\n______________GGUG__UUACC___GUAGUUUC____CGUCA\n3'-UUU...CCCGA____UU_____CCU________UUUU_____CCG-5'\n_____________|_______________________________|\n_____________35______________________________3\n |
152 -- 158 |
13 -- 19 |
-21.5315 kcal/mol |
6.56187 kcal/mol |
4.26884 kcal/mol |
139 167@LB@ | |@LB@5'-CAC...GACCA U U UAC AAAUA...ACU-3'@LB@ CCAU AAUGG UGUCGAAG GCAGU@LB@ |||: ||||| ::||:||| |||||@LB@ GGUG UUACC GUAGUUUC CGUCA@LB@3'-UUU...CCCGA UU CCU UUUU CCG-5'@LB@ | |@LB@ 35 3@LB@@LB@@LB@Energy -10.70 kcal/mol@LB@Hybridization Energy -21.5315 kcal/mol@LB@Unfolding Energy - mRNA 6.56187 kcal/mol@LB@Unfolding Energy - sRNA 4.26884 kcal/mol@LB@@LB@Position - mRNA 140 -- 166@LB@Position - sRNA 4 -- 34@LB@Position Seed - mRNA 152 -- 158@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 26 |
0.001009 |
0.1361 |
b3731 |
atpC |
-14.21 |
0.042680 |
144 -- 160 |
2 -- 20 |
F1 sector of membrane-bound ATP synthase epsilon subunit |
|
_____________143_________________161\n_____________|___________________|\n5'-UCC...GGUUC______________U____AAAAA...UGG-3'\n______________CAUCGAAGA__AGC_GUGG\n______________||||:||||__|||_||||\n______________GUAGUUUCU__UCG_CACC\n3'-UUU...CCCCU_________UU___U____G-5'\n_____________|___________________|\n_____________21__________________1\n |
146 -- 152 |
12 -- 18 |
-19.7705 kcal/mol |
4.1055 kcal/mol |
1.45839 kcal/mol |
143 161@LB@ | |@LB@5'-UCC...GGUUC U AAAAA...UGG-3'@LB@ CAUCGAAGA AGC GUGG@LB@ ||||:|||| ||| ||||@LB@ GUAGUUUCU UCG CACC@LB@3'-UUU...CCCCU UU U G-5'@LB@ | |@LB@ 21 1@LB@@LB@@LB@Energy -14.21 kcal/mol@LB@Hybridization Energy -19.7705 kcal/mol@LB@Unfolding Energy - mRNA 4.1055 kcal/mol@LB@Unfolding Energy - sRNA 1.45839 kcal/mol@LB@@LB@Position - mRNA 144 -- 160@LB@Position - sRNA 2 -- 20@LB@Position Seed - mRNA 146 -- 152@LB@Position Seed - sRNA 12 -- 18@LB@ |
| 16 |
0.0006527 |
0.1243 |
b2563 |
acpS |
-16.60 |
0.010715 |
145 -- 164 |
1 -- 23 |
holo-[acyl-carrier-protein] synthase 1 |
|
_____________144_____________________165\n_____________|_______________________|\n5'-GCC...UGACC______G_____U__________AGAAA...GCG-3'\n______________GGAC_U_AAAGA___GCGGUGGC\n______________||||_|_|||||___||:|||||\n______________CCUG_A_UUUCU___CGUCACCG\n3'-UUU...UUACC____U_G_____UUU________-5'\n_____________|______________________|\n_____________24_____________________1\n |
158 -- 164 |
1 -- 7 |
-25.7246 kcal/mol |
7.54829 kcal/mol |
1.57928 kcal/mol |
144 165@LB@ | |@LB@5'-GCC...UGACC G U AGAAA...GCG-3'@LB@ GGAC U AAAGA GCGGUGGC@LB@ |||| | ||||| ||:|||||@LB@ CCUG A UUUCU CGUCACCG@LB@3'-UUU...UUACC U G UUU -5'@LB@ | |@LB@ 24 1@LB@@LB@@LB@Energy -16.60 kcal/mol@LB@Hybridization Energy -25.7246 kcal/mol@LB@Unfolding Energy - mRNA 7.54829 kcal/mol@LB@Unfolding Energy - sRNA 1.57928 kcal/mol@LB@@LB@Position - mRNA 145 -- 164@LB@Position - sRNA 1 -- 23@LB@Position Seed - mRNA 158 -- 164@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 102 |
0.006464 |
0.2224 |
b3785 |
wzzE |
-10.51 |
0.228012 |
146 -- 168 |
1 -- 22 |
Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
|
_____________145_____________________169\n_____________|_______________________|\n5'-GCU...ACGCA___UG__U_____UC________AGCCC...UUA-3'\n______________GAC__CG_AGAAA__GUGGUGGC\n______________|||__|:_|||||__|::|||||\n______________CUG__GU_UCUUU__CGUCACCG\n3'-UUU...UACCC___UA__U_____U_________-5'\n_____________|______________________|\n_____________23_____________________1\n |
162 -- 168 |
1 -- 7 |
-19.8866 kcal/mol |
7.83936 kcal/mol |
1.54023 kcal/mol |
145 169@LB@ | |@LB@5'-GCU...ACGCA UG U UC AGCCC...UUA-3'@LB@ GAC CG AGAAA GUGGUGGC@LB@ ||| |: ||||| |::|||||@LB@ CUG GU UCUUU CGUCACCG@LB@3'-UUU...UACCC UA U U -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -10.51 kcal/mol@LB@Hybridization Energy -19.8866 kcal/mol@LB@Unfolding Energy - mRNA 7.83936 kcal/mol@LB@Unfolding Energy - sRNA 1.54023 kcal/mol@LB@@LB@Position - mRNA 146 -- 168@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 101 |
0.006298 |
0.2188 |
b3549 |
tag |
-14.94 |
0.028658 |
147 -- 165 |
3 -- 21 |
3-methyl-adenine DNA glycosylase I constitutive |
|
_____________146__________________166\n_____________|____________________|\n5'-GCA...CCGAU_________________C__AAAUU...AAA-3'\n______________GCGUC_AAGAAAAGCGG_UG\n______________:|:||_|||||||||:|_||\n______________UGUAG_UUCUUUUCGUC_AC\n3'-UUU...ACCCC_____U______________CG-5'\n_____________|____________________|\n_____________22___________________2\n |
156 -- 162 |
5 -- 11 |
-20.7072 kcal/mol |
4.25403 kcal/mol |
1.5107 kcal/mol |
146 166@LB@ | |@LB@5'-GCA...CCGAU C AAAUU...AAA-3'@LB@ GCGUC AAGAAAAGCGG UG@LB@ :|:|| |||||||||:| ||@LB@ UGUAG UUCUUUUCGUC AC@LB@3'-UUU...ACCCC U CG-5'@LB@ | |@LB@ 22 2@LB@@LB@@LB@Energy -14.94 kcal/mol@LB@Hybridization Energy -20.7072 kcal/mol@LB@Unfolding Energy - mRNA 4.25403 kcal/mol@LB@Unfolding Energy - sRNA 1.5107 kcal/mol@LB@@LB@Position - mRNA 147 -- 165@LB@Position - sRNA 3 -- 21@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 5 -- 11@LB@ |
| 76 |
0.004413 |
0.2038 |
b3211 |
yhcC |
-9.63 |
0.312909 |
148 -- 162 |
49 -- 62 |
putative Fe-S oxidoreductase Radical SAM superfamily protein |
|
_____________147_____________163\n_____________|_______________|\n5'-UGC...CGAAU______AA_______AGGCU...GCC-3'\n______________UGAGCU__AAAUGGC\n______________|||:|:__|||||||\n______________ACUUGG__UUUACCG\n3'-UUU...UUGGA______C________CCCCA...CCG-5'\n_____________|_______________|\n_____________63______________48\n |
156 -- 162 |
49 -- 55 |
-15.5959 kcal/mol |
2.00852 kcal/mol |
3.95968 kcal/mol |
147 163@LB@ | |@LB@5'-UGC...CGAAU AA AGGCU...GCC-3'@LB@ UGAGCU AAAUGGC@LB@ |||:|: |||||||@LB@ ACUUGG UUUACCG@LB@3'-UUU...UUGGA C CCCCA...CCG-5'@LB@ | |@LB@ 63 48@LB@@LB@@LB@Energy -9.63 kcal/mol@LB@Hybridization Energy -15.5959 kcal/mol@LB@Unfolding Energy - mRNA 2.00852 kcal/mol@LB@Unfolding Energy - sRNA 3.95968 kcal/mol@LB@@LB@Position - mRNA 148 -- 162@LB@Position - sRNA 49 -- 62@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 49 -- 55@LB@ |
| 109 |
0.007372 |
0.2348 |
b3701 |
dnaN |
-13.44 |
0.063163 |
149 -- 162 |
9 -- 22 |
DNA polymerase III beta subunit |
|
_____________148____________163\n_____________|______________|\n5'-GGC...GCCAC______________UUUUU...UGC-3'\n______________GAUAUCAAAGAAGA\n______________||:|||||||||:|\n______________CUGUAGUUUCUUUU\n3'-UUU...UACCC______________CGUCACCG-5'\n_____________|______________|\n_____________23_____________8\n |
156 -- 162 |
9 -- 15 |
-16.0152 kcal/mol |
2.0875 kcal/mol |
0.488786 kcal/mol |
148 163@LB@ | |@LB@5'-GGC...GCCAC UUUUU...UGC-3'@LB@ GAUAUCAAAGAAGA@LB@ ||:|||||||||:|@LB@ CUGUAGUUUCUUUU@LB@3'-UUU...UACCC CGUCACCG-5'@LB@ | |@LB@ 23 8@LB@@LB@@LB@Energy -13.44 kcal/mol@LB@Hybridization Energy -16.0152 kcal/mol@LB@Unfolding Energy - mRNA 2.0875 kcal/mol@LB@Unfolding Energy - sRNA 0.488786 kcal/mol@LB@@LB@Position - mRNA 149 -- 162@LB@Position - sRNA 9 -- 22@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 9 -- 15@LB@ |
| 160 |
0.0118 |
0.2504 |
b0078 |
ilvH |
-13.58 |
0.059018 |
151 -- 175 |
1 -- 25 |
acetolactate synthase 3 small subunit valine-sensitive |
|
_____________150_______________________176\n_____________|_________________________|\n5'-GCC...UUCGC_______GAAU___UGAAAU_____UAAGC...UGA-3'\n______________GGGGGCG____GGA______GUGGU\n______________||||:|:____:||______||||:\n______________CCCCUGU____UCU______CACCG\n3'-UUU...UUUUA_______AGUU___UUUCGU_____-5'\n_____________|________________________|\n_____________26_______________________1\n |
151 -- 157 |
19 -- 25 |
-21.9405 kcal/mol |
5.84786 kcal/mol |
2.51748 kcal/mol |
150 176@LB@ | |@LB@5'-GCC...UUCGC GAAU UGAAAU UAAGC...UGA-3'@LB@ GGGGGCG GGA GUGGU@LB@ ||||:|: :|| ||||:@LB@ CCCCUGU UCU CACCG@LB@3'-UUU...UUUUA AGUU UUUCGU -5'@LB@ | |@LB@ 26 1@LB@@LB@@LB@Energy -13.58 kcal/mol@LB@Hybridization Energy -21.9405 kcal/mol@LB@Unfolding Energy - mRNA 5.84786 kcal/mol@LB@Unfolding Energy - sRNA 2.51748 kcal/mol@LB@@LB@Position - mRNA 151 -- 175@LB@Position - sRNA 1 -- 25@LB@Position Seed - mRNA 151 -- 157@LB@Position Seed - sRNA 19 -- 25@LB@ |
| 112 |
0.007494 |
0.2348 |
b2529 |
iscU |
-11.51 |
0.152972 |
152 -- 183 |
2 -- 33 |
iron-sulfur cluster assembly scaffold protein |
|
_____________151______________________________184\n_____________|________________________________|\n5'-UGG...AACAG___C_______CU_____UUAAUC____UC__AAUCA...GGG-3'\n______________CAU_GAAUGGG__CAUCA______GGUA__GG\n______________||:_:||||||__|||||______:|:|__||\n______________GUG_UUUACCC__GUAGU______UCGU__CC\n3'-UUU...CCGAG___U_______CU_____UUCUUU____CA__G-5'\n_____________|________________________________|\n_____________34_______________________________1\n |
156 -- 162 |
23 -- 29 |
-21.7 kcal/mol |
7.11537 kcal/mol |
3.07861 kcal/mol |
151 184@LB@ | |@LB@5'-UGG...AACAG C CU UUAAUC UC AAUCA...GGG-3'@LB@ CAU GAAUGGG CAUCA GGUA GG@LB@ ||: :|||||| ||||| :|:| ||@LB@ GUG UUUACCC GUAGU UCGU CC@LB@3'-UUU...CCGAG U CU UUCUUU CA G-5'@LB@ | |@LB@ 34 1@LB@@LB@@LB@Energy -11.51 kcal/mol@LB@Hybridization Energy -21.7 kcal/mol@LB@Unfolding Energy - mRNA 7.11537 kcal/mol@LB@Unfolding Energy - sRNA 3.07861 kcal/mol@LB@@LB@Position - mRNA 152 -- 183@LB@Position - sRNA 2 -- 33@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 23 -- 29@LB@ |
| 153 |
0.01124 |
0.2504 |
b0414 |
ribD |
-14.78 |
0.031370 |
153 -- 170 |
1 -- 22 |
fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase |
|
_____________152____________________171\n_____________|______________________|\n5'-AAA...UCGAA____________UU________GAAGA...AAG-3'\n______________GAUAUCAAAGAA______UGGC\n______________||:|||||||||______||||\n______________CUGUAGUUUCUU______ACCG\n3'-UUU...UACCC____________UUCGUC____-5'\n_____________|_____________________|\n_____________23____________________1\n |
158 -- 164 |
11 -- 17 |
-19.3666 kcal/mol |
3.04735 kcal/mol |
1.54023 kcal/mol |
152 171@LB@ | |@LB@5'-AAA...UCGAA UU GAAGA...AAG-3'@LB@ GAUAUCAAAGAA UGGC@LB@ ||:||||||||| ||||@LB@ CUGUAGUUUCUU ACCG@LB@3'-UUU...UACCC UUCGUC -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -14.78 kcal/mol@LB@Hybridization Energy -19.3666 kcal/mol@LB@Unfolding Energy - mRNA 3.04735 kcal/mol@LB@Unfolding Energy - sRNA 1.54023 kcal/mol@LB@@LB@Position - mRNA 153 -- 170@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 158 -- 164@LB@Position Seed - sRNA 11 -- 17@LB@ |
