73 |
0.002141 |
0.09621 |
b0740 |
tolB |
-11.17 |
0.098836 |
117 -- 150 |
8 -- 46 |
periplasmic protein |
|
_____________116______________________________________151\n_____________|________________________________________|\n5'-UCC...GCCAC______________GUUUUGU___________________AACAU...CCG-3'\n______________GG_GGUU_CUGGUA_______GUAUUUUA___GUU_UGUU\n______________||_||||_||||||_______|:||||||___|||_||||\n______________CC_CCAA_GACCAU_______CGUAAAAU___CAA_ACAA\n3'-UUU...UUCCU__A____G______GUCGAU_________ACC___U____AAAGUCG-5'\n_____________|________________________________________|\n_____________47_______________________________________7\n |
137 -- 143 |
19 -- 25 |
-23.6895 kcal/mol |
7.90884 kcal/mol |
4.60831 kcal/mol |
116 151@LB@ | |@LB@5'-UCC...GCCAC GUUUUGU AACAU...CCG-3'@LB@ GG GGUU CUGGUA GUAUUUUA GUU UGUU@LB@ || |||| |||||| |:|||||| ||| ||||@LB@ CC CCAA GACCAU CGUAAAAU CAA ACAA@LB@3'-UUU...UUCCU A G GUCGAU ACC U AAAGUCG-5'@LB@ | |@LB@ 47 7@LB@@LB@@LB@Energy -11.17 kcal/mol@LB@Hybridization Energy -23.6895 kcal/mol@LB@Unfolding Energy - mRNA 7.90884 kcal/mol@LB@Unfolding Energy - sRNA 4.60831 kcal/mol@LB@@LB@Position - mRNA 117 -- 150@LB@Position - sRNA 8 -- 46@LB@Position Seed - mRNA 137 -- 143@LB@Position Seed - sRNA 19 -- 25@LB@ |
136 |
0.005909 |
0.146 |
b1291 |
sapD |
-11.34 |
0.091029 |
118 -- 151 |
12 -- 36 |
antimicrobial peptide ABC transporter ATPase |
|
_____________117________________________________152\n_____________|__________________________________|\n5'-AUC...UGCCA________AAUUAUGAU______G____U_____ACCUC...GUG-3'\n______________GGUGCGGC_________UAGCGU_UUGU_GGUUA\n______________|||:|:||_________||||:|_||:|_|||||\n______________CCAUGUCG_________AUCGUA_AAUA_CCAAU\n3'-UUU...AAGGA_______________________A____C_____ACAAA...UCG-5'\n_____________|__________________________________|\n_____________37_________________________________11\n |
119 -- 125 |
29 -- 35 |
-24.3443 kcal/mol |
11.5428 kcal/mol |
1.45699 kcal/mol |
117 152@LB@ | |@LB@5'-AUC...UGCCA AAUUAUGAU G U ACCUC...GUG-3'@LB@ GGUGCGGC UAGCGU UUGU GGUUA@LB@ |||:|:|| ||||:| ||:| |||||@LB@ CCAUGUCG AUCGUA AAUA CCAAU@LB@3'-UUU...AAGGA A C ACAAA...UCG-5'@LB@ | |@LB@ 37 11@LB@@LB@@LB@Energy -11.34 kcal/mol@LB@Hybridization Energy -24.3443 kcal/mol@LB@Unfolding Energy - mRNA 11.5428 kcal/mol@LB@Unfolding Energy - sRNA 1.45699 kcal/mol@LB@@LB@Position - mRNA 118 -- 151@LB@Position - sRNA 12 -- 36@LB@Position Seed - mRNA 119 -- 125@LB@Position Seed - sRNA 29 -- 35@LB@ |
41 |
0.0008276 |
0.06626 |
b1218 |
chaC |
-8.54 |
0.293650 |
119 -- 139 |
24 -- 45 |
cation transport regulator |
|
_____________118____________________140\n_____________|______________________|\n5'-AUA...CGUUA________AAAAUG________AAAAU...CGC-3'\n______________GUGGUUUC______AGC_AGUA\n______________||||||:|______|||_||:|\n______________CACCAAGG______UCG_UCGU\n3'-UUU...UCCUC________ACCAUG___A____AAAAU...UCG-5'\n_____________|______________________|\n_____________46_____________________23\n |
120 -- 126 |
38 -- 44 |
-17.6586 kcal/mol |
4.55792 kcal/mol |
4.55794 kcal/mol |
118 140@LB@ | |@LB@5'-AUA...CGUUA AAAAUG AAAAU...CGC-3'@LB@ GUGGUUUC AGC AGUA@LB@ ||||||:| ||| ||:|@LB@ CACCAAGG UCG UCGU@LB@3'-UUU...UCCUC ACCAUG A AAAAU...UCG-5'@LB@ | |@LB@ 46 23@LB@@LB@@LB@Energy -8.54 kcal/mol@LB@Hybridization Energy -17.6586 kcal/mol@LB@Unfolding Energy - mRNA 4.55792 kcal/mol@LB@Unfolding Energy - sRNA 4.55794 kcal/mol@LB@@LB@Position - mRNA 119 -- 139@LB@Position - sRNA 24 -- 45@LB@Position Seed - mRNA 120 -- 126@LB@Position Seed - sRNA 38 -- 44@LB@ |
189 |
0.01085 |
0.1919 |
b3606 |
trmL |
-8.64 |
0.283903 |
120 -- 126 |
63 -- 69 |
tRNA Leu mC34 mU34 2'-O-methyltransferase SAM-dependent |
|
_____________119_____127\n_____________|_______|\n5'-UAG...CCUCC_______GGGCC...AAC-3'\n______________GGGGAGA\n______________:||||||\n______________UCCCUCU\n3'-UUU...CACAU_______AAUGU...UCG-5'\n_____________|_______|\n_____________70______62\n |
120 -- 126 |
63 -- 69 |
-10.8913 kcal/mol |
1.31422 kcal/mol |
0.939295 kcal/mol |
119 127@LB@ | |@LB@5'-UAG...CCUCC GGGCC...AAC-3'@LB@ GGGGAGA@LB@ :||||||@LB@ UCCCUCU@LB@3'-UUU...CACAU AAUGU...UCG-5'@LB@ | |@LB@ 70 62@LB@@LB@@LB@Energy -8.64 kcal/mol@LB@Hybridization Energy -10.8913 kcal/mol@LB@Unfolding Energy - mRNA 1.31422 kcal/mol@LB@Unfolding Energy - sRNA 0.939295 kcal/mol@LB@@LB@Position - mRNA 120 -- 126@LB@Position - sRNA 63 -- 69@LB@Position Seed - mRNA 120 -- 126@LB@Position Seed - sRNA 63 -- 69@LB@ |
139 |
0.00635 |
0.1535 |
b0800 |
ybiB |
-9.74 |
0.186276 |
120 -- 129 |
27 -- 36 |
putative family 3 glycosyltransferase |
|
_____________119________130\n_____________|__________|\n5'-GCC...CUGAA__________AAAAG...UCA-3'\n______________GGUAUAGUUA\n______________||||:||:||\n______________CCAUGUCGAU\n3'-UUU...AAGGA__________CGUAA...UCG-5'\n_____________|__________|\n_____________37_________26\n |
123 -- 129 |
27 -- 33 |
-12.0711 kcal/mol |
1.15693 kcal/mol |
1.17709 kcal/mol |
119 130@LB@ | |@LB@5'-GCC...CUGAA AAAAG...UCA-3'@LB@ GGUAUAGUUA@LB@ ||||:||:||@LB@ CCAUGUCGAU@LB@3'-UUU...AAGGA CGUAA...UCG-5'@LB@ | |@LB@ 37 26@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -12.0711 kcal/mol@LB@Unfolding Energy - mRNA 1.15693 kcal/mol@LB@Unfolding Energy - sRNA 1.17709 kcal/mol@LB@@LB@Position - mRNA 120 -- 129@LB@Position - sRNA 27 -- 36@LB@Position Seed - mRNA 123 -- 129@LB@Position Seed - sRNA 27 -- 33@LB@ |
88 |
0.002837 |
0.1082 |
b4377 |
yjjU |
-10.09 |
0.160689 |
120 -- 144 |
1 -- 33 |
putative patatin-like family phospholipase |
|
_____________119________________________________145\n_____________|__________________________________|\n5'-AGG...GUCCA____A___________C_________________GAAUA...GAC-3'\n______________GCGG_CUGGC_UUUUG_GG________UUUUAGC\n______________:|:|_||:||_||||:_||________|||:|||\n______________UGUC_GAUCG_AAAAU_CC________AAAGUCG\n3'-UUU...GACCA__________U_____A__CAAUACAA_______-5'\n_____________|_________________________________|\n_____________34________________________________1\n |
138 -- 144 |
1 -- 7 |
-20.956 kcal/mol |
9.37145 kcal/mol |
1.49313 kcal/mol |
119 145@LB@ | |@LB@5'-AGG...GUCCA A C GAAUA...GAC-3'@LB@ GCGG CUGGC UUUUG GG UUUUAGC@LB@ :|:| ||:|| ||||: || |||:|||@LB@ UGUC GAUCG AAAAU CC AAAGUCG@LB@3'-UUU...GACCA U A CAAUACAA -5'@LB@ | |@LB@ 34 1@LB@@LB@@LB@Energy -10.09 kcal/mol@LB@Hybridization Energy -20.956 kcal/mol@LB@Unfolding Energy - mRNA 9.37145 kcal/mol@LB@Unfolding Energy - sRNA 1.49313 kcal/mol@LB@@LB@Position - mRNA 120 -- 144@LB@Position - sRNA 1 -- 33@LB@Position Seed - mRNA 138 -- 144@LB@Position Seed - sRNA 1 -- 7@LB@ |
185 |
0.01059 |
0.1919 |
b3856 |
mobB |
-14.40 |
0.016564 |
123 -- 150 |
1 -- 31 |
molybdopterin-guanine dinucleotide biosynthesis protein B |
|
_____________122______________________________151\n_____________|________________________________|\n5'-GUG...CGUCU________GUC____C_____A__________GAUCA...CCA-3'\n______________GGCUGGCG____AUG_GGUUG____UUUCAGC\n______________:|||:||:____|||_||||:____|||||||\n______________UCGAUCGU____UAC_CCAAU____AAAGUCG\n3'-UUU...CCAUG________AAAA_________ACAA_______-5'\n_____________|_______________________________|\n_____________32______________________________1\n |
144 -- 150 |
1 -- 7 |
-26.2194 kcal/mol |
10.3308 kcal/mol |
1.48722 kcal/mol |
122 151@LB@ | |@LB@5'-GUG...CGUCU GUC C A GAUCA...CCA-3'@LB@ GGCUGGCG AUG GGUUG UUUCAGC@LB@ :|||:||: ||| ||||: |||||||@LB@ UCGAUCGU UAC CCAAU AAAGUCG@LB@3'-UUU...CCAUG AAAA ACAA -5'@LB@ | |@LB@ 32 1@LB@@LB@@LB@Energy -14.40 kcal/mol@LB@Hybridization Energy -26.2194 kcal/mol@LB@Unfolding Energy - mRNA 10.3308 kcal/mol@LB@Unfolding Energy - sRNA 1.48722 kcal/mol@LB@@LB@Position - mRNA 123 -- 150@LB@Position - sRNA 1 -- 31@LB@Position Seed - mRNA 144 -- 150@LB@Position Seed - sRNA 1 -- 7@LB@ |
161 |
0.008114 |
0.1694 |
b3656 |
yicI |
-11.96 |
0.067144 |
124 -- 143 |
14 -- 37 |
putative alpha-glucosidase |
b3878 |
_____________123______________________144\n_____________|________________________|\n5'-ACA...CGUUA___A_________UCA________AAACG...UGG-3'\n______________UGG_ACAGCUGGC_______GGGU\n______________|||_||||||:||_______||||\n______________ACC_UGUCGAUCG_______CCCA\n3'-UUU...CAAGG___A_________UAAAAUA____AUACA...UCG-5'\n_____________|________________________|\n_____________38_______________________13\n |
130 -- 136 |
25 -- 31 |
-23.0355 kcal/mol |
8.41802 kcal/mol |
2.65978 kcal/mol |
123 144@LB@ | |@LB@5'-ACA...CGUUA A UCA AAACG...UGG-3'@LB@ UGG ACAGCUGGC GGGU@LB@ ||| ||||||:|| ||||@LB@ ACC UGUCGAUCG CCCA@LB@3'-UUU...CAAGG A UAAAAUA AUACA...UCG-5'@LB@ | |@LB@ 38 13@LB@@LB@@LB@Energy -11.96 kcal/mol@LB@Hybridization Energy -23.0355 kcal/mol@LB@Unfolding Energy - mRNA 8.41802 kcal/mol@LB@Unfolding Energy - sRNA 2.65978 kcal/mol@LB@@LB@Position - mRNA 124 -- 143@LB@Position - sRNA 14 -- 37@LB@Position Seed - mRNA 130 -- 136@LB@Position Seed - sRNA 25 -- 31@LB@ |
126 |
0.00537 |
0.142 |
b3789 |
rffH |
-9.20 |
0.230539 |
124 -- 140 |
30 -- 46 |
glucose-1-phosphate thymidylyltransferase |
|
_____________123_______________141\n_____________|_________________|\n5'-GGC...AAGCU_____AAG_A_______GACGG...UGA-3'\n______________GGUGG___C_GGUGCAG\n______________|||||___|_|||:|||\n______________CCACC___G_CCAUGUC\n3'-UUU...UUCCU_____AAG_A_______GAUCG...UCG-5'\n_____________|_________________|\n_____________47________________29\n |
134 -- 140 |
30 -- 36 |
-19.3061 kcal/mol |
5.8192 kcal/mol |
4.28755 kcal/mol |
123 141@LB@ | |@LB@5'-GGC...AAGCU AAG A GACGG...UGA-3'@LB@ GGUGG C GGUGCAG@LB@ ||||| | |||:|||@LB@ CCACC G CCAUGUC@LB@3'-UUU...UUCCU AAG A GAUCG...UCG-5'@LB@ | |@LB@ 47 29@LB@@LB@@LB@Energy -9.20 kcal/mol@LB@Hybridization Energy -19.3061 kcal/mol@LB@Unfolding Energy - mRNA 5.8192 kcal/mol@LB@Unfolding Energy - sRNA 4.28755 kcal/mol@LB@@LB@Position - mRNA 124 -- 140@LB@Position - sRNA 30 -- 46@LB@Position Seed - mRNA 134 -- 140@LB@Position Seed - sRNA 30 -- 36@LB@ |
17 |
0.0001135 |
0.02244 |
b3531 |
bcsZ |
-11.80 |
0.072553 |
125 -- 136 |
14 -- 30 |
endo-1 4-D-glucanase |
|
_____________124_______________137\n_____________|_________________|\n5'-UCA...AUAUU_________________ACUGU...AGG-3'\n______________GCUGGCA_____UGGGU\n______________|||:|||_____|||||\n______________CGAUCGU_____ACCCA\n3'-UUU...CAUGU_______AAAAU_____AUACA...UCG-5'\n_____________|_________________|\n_____________31________________13\n |
125 -- 131 |
24 -- 30 |
-17.2227 kcal/mol |
4.01076 kcal/mol |
1.40705 kcal/mol |
124 137@LB@ | |@LB@5'-UCA...AUAUU ACUGU...AGG-3'@LB@ GCUGGCA UGGGU@LB@ |||:||| |||||@LB@ CGAUCGU ACCCA@LB@3'-UUU...CAUGU AAAAU AUACA...UCG-5'@LB@ | |@LB@ 31 13@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -17.2227 kcal/mol@LB@Unfolding Energy - mRNA 4.01076 kcal/mol@LB@Unfolding Energy - sRNA 1.40705 kcal/mol@LB@@LB@Position - mRNA 125 -- 136@LB@Position - sRNA 14 -- 30@LB@Position Seed - mRNA 125 -- 131@LB@Position Seed - sRNA 24 -- 30@LB@ |