189 |
0.02233 |
0.3796 |
b3417 |
malP |
-8.63 |
0.040366 |
227 -- 245 |
35 -- 53 |
maltodextrin phosphorylase |
|
_____________226_________________246\n_____________|___________________|\n5'-ACA...GAUAA__AAUUU____________UCACG...GCC-3'\n______________GC_____CAGGAAGCGCUU\n______________||_____||:|||||:|||\n______________CG_____GUUCUUCGUGAA\n3'-UUU...UUGAA__AAUUC____________UUUUU...CAA-5'\n_____________|___________________|\n_____________54__________________34\n |
239 -- 245 |
35 -- 41 |
-18.4249 kcal/mol |
3.68713 kcal/mol |
6.10399 kcal/mol |
226 246@LB@ | |@LB@5'-ACA...GAUAA AAUUU UCACG...GCC-3'@LB@ GC CAGGAAGCGCUU@LB@ || ||:|||||:|||@LB@ CG GUUCUUCGUGAA@LB@3'-UUU...UUGAA AAUUC UUUUU...CAA-5'@LB@ | |@LB@ 54 34@LB@@LB@@LB@Energy -8.63 kcal/mol@LB@Hybridization Energy -18.4249 kcal/mol@LB@Unfolding Energy - mRNA 3.68713 kcal/mol@LB@Unfolding Energy - sRNA 6.10399 kcal/mol@LB@@LB@Position - mRNA 227 -- 245@LB@Position - sRNA 35 -- 53@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 35 -- 41@LB@ |
145 |
0.01456 |
0.3231 |
b1529 |
marC |
-5.50 |
0.250589 |
206 -- 227 |
39 -- 59 |
UPF0056 family inner membrane protein |
|
_____________205____________________228\n_____________|______________________|\n5'-UGG...AUGUU__________A______UU___CUGGG...GCA-3'\n______________AGAUUUGUUU_AAGCAA__GGC\n______________|:|:|||:||_||||||__:||\n______________UUUGAACGAA_UUCGUU__UCG\n3'-UUU...CCUAC_________________CU___UGAAU...CAA-5'\n_____________|______________________|\n_____________60_____________________38\n |
207 -- 213 |
52 -- 58 |
-17.1508 kcal/mol |
5.49588 kcal/mol |
6.15149 kcal/mol |
205 228@LB@ | |@LB@5'-UGG...AUGUU A UU CUGGG...GCA-3'@LB@ AGAUUUGUUU AAGCAA GGC@LB@ |:|:|||:|| |||||| :||@LB@ UUUGAACGAA UUCGUU UCG@LB@3'-UUU...CCUAC CU UGAAU...CAA-5'@LB@ | |@LB@ 60 38@LB@@LB@@LB@Energy -5.50 kcal/mol@LB@Hybridization Energy -17.1508 kcal/mol@LB@Unfolding Energy - mRNA 5.49588 kcal/mol@LB@Unfolding Energy - sRNA 6.15149 kcal/mol@LB@@LB@Position - mRNA 206 -- 227@LB@Position - sRNA 39 -- 59@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 52 -- 58@LB@ |
104 |
0.008606 |
0.2665 |
b0956 |
matP |
-4.56 |
0.392859 |
215 -- 228 |
25 -- 38 |
Ter macrodomain organizer matS-binding protein |
|
_____________214____________229\n_____________|______________|\n5'-UUU...CAACA_________UC___AAAGC...AAG-3'\n______________ACUUGAAAA__UUG\n______________||||:||||__|:|\n______________UGAAUUUUU__AGC\n3'-UUU...CUUCG_________UA___AAUGU...CAA-5'\n_____________|______________|\n_____________39_____________24\n |
216 -- 222 |
31 -- 37 |
-8.38693 kcal/mol |
2.39574 kcal/mol |
1.4343 kcal/mol |
214 229@LB@ | |@LB@5'-UUU...CAACA UC AAAGC...AAG-3'@LB@ ACUUGAAAA UUG@LB@ ||||:|||| |:|@LB@ UGAAUUUUU AGC@LB@3'-UUU...CUUCG UA AAUGU...CAA-5'@LB@ | |@LB@ 39 24@LB@@LB@@LB@Energy -4.56 kcal/mol@LB@Hybridization Energy -8.38693 kcal/mol@LB@Unfolding Energy - mRNA 2.39574 kcal/mol@LB@Unfolding Energy - sRNA 1.4343 kcal/mol@LB@@LB@Position - mRNA 215 -- 228@LB@Position - sRNA 25 -- 38@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 31 -- 37@LB@ |
155 |
0.01672 |
0.3455 |
b1686 |
menI |
-4.77 |
0.356790 |
227 -- 235 |
36 -- 44 |
1 4-dihydroxy-2-naphthoyl-CoA hydrolase |
|
_____________226_______236\n_____________|_________|\n5'-GGC...ACCCU_________GAAUG...AUG-3'\n______________GGAAGCACU\n______________:||||||||\n______________UCUUCGUGA\n3'-UUU...UUCGU_________AUUUU...CAA-5'\n_____________|_________|\n_____________45________35\n |
229 -- 235 |
36 -- 42 |
-13.4239 kcal/mol |
4.1512 kcal/mol |
4.5009 kcal/mol |
226 236@LB@ | |@LB@5'-GGC...ACCCU GAAUG...AUG-3'@LB@ GGAAGCACU@LB@ :||||||||@LB@ UCUUCGUGA@LB@3'-UUU...UUCGU AUUUU...CAA-5'@LB@ | |@LB@ 45 35@LB@@LB@@LB@Energy -4.77 kcal/mol@LB@Hybridization Energy -13.4239 kcal/mol@LB@Unfolding Energy - mRNA 4.1512 kcal/mol@LB@Unfolding Energy - sRNA 4.5009 kcal/mol@LB@@LB@Position - mRNA 227 -- 235@LB@Position - sRNA 36 -- 44@LB@Position Seed - mRNA 229 -- 235@LB@Position Seed - sRNA 36 -- 42@LB@ |
15 |
0.0003116 |
0.06692 |
b2149 |
mglA |
-7.01 |
0.109495 |
281 -- 289 |
33 -- 41 |
methyl-galactoside ABC transporter ATPase |
|
_____________280_______290\n_____________|_________|\n5'-CGA...GUUAA_________UAACG...AUU-3'\n______________GGCACUUGA\n______________:||||||:|\n______________UCGUGAAUU\n3'-UUU...GUUCU_________UUUUA...CAA-5'\n_____________|_________|\n_____________42________32\n |
283 -- 289 |
33 -- 39 |
-11.227 kcal/mol |
2.59529 kcal/mol |
1.6188 kcal/mol |
280 290@LB@ | |@LB@5'-CGA...GUUAA UAACG...AUU-3'@LB@ GGCACUUGA@LB@ :||||||:|@LB@ UCGUGAAUU@LB@3'-UUU...GUUCU UUUUA...CAA-5'@LB@ | |@LB@ 42 32@LB@@LB@@LB@Energy -7.01 kcal/mol@LB@Hybridization Energy -11.227 kcal/mol@LB@Unfolding Energy - mRNA 2.59529 kcal/mol@LB@Unfolding Energy - sRNA 1.6188 kcal/mol@LB@@LB@Position - mRNA 281 -- 289@LB@Position - sRNA 33 -- 41@LB@Position Seed - mRNA 283 -- 289@LB@Position Seed - sRNA 33 -- 39@LB@ |
98 |
0.007325 |
0.239 |
b4171 |
miaA |
-8.40 |
0.046782 |
42 -- 58 |
5 -- 24 |
delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase |
|
_____________41___________________59\n_____________|____________________|\n5'-GAA...GUGGA____________________AGCGA...UUU-3'\n______________UUGCAC___GAAAUCUGAUG\n______________||:|||___|||||||||||\n______________AAUGUG___CUUUAGACUAC\n3'-UUU...UAAGC______GUC___________ACAA-5'\n_____________|____________________|\n_____________25___________________4\n |
52 -- 58 |
5 -- 11 |
-19.996 kcal/mol |
4.00751 kcal/mol |
7.58501 kcal/mol |
41 59@LB@ | |@LB@5'-GAA...GUGGA AGCGA...UUU-3'@LB@ UUGCAC GAAAUCUGAUG@LB@ ||:||| |||||||||||@LB@ AAUGUG CUUUAGACUAC@LB@3'-UUU...UAAGC GUC ACAA-5'@LB@ | |@LB@ 25 4@LB@@LB@@LB@Energy -8.40 kcal/mol@LB@Hybridization Energy -19.996 kcal/mol@LB@Unfolding Energy - mRNA 4.00751 kcal/mol@LB@Unfolding Energy - sRNA 7.58501 kcal/mol@LB@@LB@Position - mRNA 42 -- 58@LB@Position - sRNA 5 -- 24@LB@Position Seed - mRNA 52 -- 58@LB@Position Seed - sRNA 5 -- 11@LB@ |
21 |
0.000535 |
0.08206 |
b1639 |
mliC |
-10.27 |
0.013452 |
27 -- 40 |
8 -- 21 |
inhibitor of c-type lysozyme membrane-bound; putative lipoprotein |
|
_____________26_____________41\n_____________|______________|\n5'-GCU...GGGAU______________CCUUC...UGG-3'\n______________UACCAGGAAAUCUG\n______________:|||||||||||||\n______________GUGGUCCUUUAGAC\n3'-UUU...GCAAU______________UACACAA-5'\n_____________|______________|\n_____________22_____________7\n |
32 -- 38 |
10 -- 16 |
-22.0821 kcal/mol |
4.25106 kcal/mol |
7.55865 kcal/mol |
26 41@LB@ | |@LB@5'-GCU...GGGAU CCUUC...UGG-3'@LB@ UACCAGGAAAUCUG@LB@ :|||||||||||||@LB@ GUGGUCCUUUAGAC@LB@3'-UUU...GCAAU UACACAA-5'@LB@ | |@LB@ 22 7@LB@@LB@@LB@Energy -10.27 kcal/mol@LB@Hybridization Energy -22.0821 kcal/mol@LB@Unfolding Energy - mRNA 4.25106 kcal/mol@LB@Unfolding Energy - sRNA 7.55865 kcal/mol@LB@@LB@Position - mRNA 27 -- 40@LB@Position - sRNA 8 -- 21@LB@Position Seed - mRNA 32 -- 38@LB@Position Seed - sRNA 10 -- 16@LB@ |
158 |
0.01725 |
0.3504 |
b3857 |
mobA |
-11.09 |
0.007545 |
184 -- 212 |
5 -- 35 |
molybdopterin-guanine dinucleotide synthase |
|
_____________183_____________________________213\n_____________|_______________________________|\n5'-UCC...CACAA_______GG___________U__________ACGAC...AAC-3'\n______________UAAAAGA__CG__AUAUCGG_GAAUCUGAUG\n______________|||||:|__||__|:|:|:|_:|||||||||\n______________AUUUUUU__GC__UGUGGUC_UUUAGACUAC\n3'-UUU...CGUGA_______AA__AA_______C__________ACAA-5'\n_____________|_______________________________|\n_____________36______________________________4\n |
184 -- 190 |
29 -- 35 |
-25.0811 kcal/mol |
5.24608 kcal/mol |
8.74745 kcal/mol |
183 213@LB@ | |@LB@5'-UCC...CACAA GG U ACGAC...AAC-3'@LB@ UAAAAGA CG AUAUCGG GAAUCUGAUG@LB@ |||||:| || |:|:|:| :|||||||||@LB@ AUUUUUU GC UGUGGUC UUUAGACUAC@LB@3'-UUU...CGUGA AA AA C ACAA-5'@LB@ | |@LB@ 36 4@LB@@LB@@LB@Energy -11.09 kcal/mol@LB@Hybridization Energy -25.0811 kcal/mol@LB@Unfolding Energy - mRNA 5.24608 kcal/mol@LB@Unfolding Energy - sRNA 8.74745 kcal/mol@LB@@LB@Position - mRNA 184 -- 212@LB@Position - sRNA 5 -- 35@LB@Position Seed - mRNA 184 -- 190@LB@Position Seed - sRNA 29 -- 35@LB@ |
157 |
0.01701 |
0.3489 |
b3856 |
mobB |
-4.94 |
0.329991 |
189 -- 197 |
52 -- 60 |
molybdopterin-guanine dinucleotide biosynthesis protein B |
|
_____________188_______198\n_____________|_________|\n5'-GUG...CCAGA_________CCGAU...CCA-3'\n______________GGAGCUUGC\n______________|:|:|||||\n______________CUUUGAACG\n3'-UUU...CCCUA_________AAUUC...CAA-5'\n_____________|_________|\n_____________61________51\n |
191 -- 197 |
52 -- 58 |
-10.6989 kcal/mol |
2.59286 kcal/mol |
3.16562 kcal/mol |
188 198@LB@ | |@LB@5'-GUG...CCAGA CCGAU...CCA-3'@LB@ GGAGCUUGC@LB@ |:|:|||||@LB@ CUUUGAACG@LB@3'-UUU...CCCUA AAUUC...CAA-5'@LB@ | |@LB@ 61 51@LB@@LB@@LB@Energy -4.94 kcal/mol@LB@Hybridization Energy -10.6989 kcal/mol@LB@Unfolding Energy - mRNA 2.59286 kcal/mol@LB@Unfolding Energy - sRNA 3.16562 kcal/mol@LB@@LB@Position - mRNA 189 -- 197@LB@Position - sRNA 52 -- 60@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 52 -- 58@LB@ |
34 |
0.001265 |
0.1198 |
b0826 |
moeB |
-10.82 |
0.009172 |
276 -- 295 |
26 -- 46 |
molybdopterin synthase sulfurylase |
|
_____________275___________________296\n_____________|_____________________|\n5'-CUU...ACGGC_____________________UCGCG-3'\n______________CAGGAGGCGC_UGAAAGAUUC\n______________||:||:||:|_|:|||:||||\n______________GUUCUUCGUG_AUUUUUUAAG\n3'-UUU...AAUUC__________A__________CAAUG...CAA-5'\n_____________|_____________________|\n_____________47____________________25\n |
289 -- 295 |
26 -- 32 |
-23.0973 kcal/mol |
6.15128 kcal/mol |
6.13041 kcal/mol |
275 296@LB@ | |@LB@5'-CUU...ACGGC UCGCG-3'@LB@ CAGGAGGCGC UGAAAGAUUC@LB@ ||:||:||:| |:|||:||||@LB@ GUUCUUCGUG AUUUUUUAAG@LB@3'-UUU...AAUUC A CAAUG...CAA-5'@LB@ | |@LB@ 47 25@LB@@LB@@LB@Energy -10.82 kcal/mol@LB@Hybridization Energy -23.0973 kcal/mol@LB@Unfolding Energy - mRNA 6.15128 kcal/mol@LB@Unfolding Energy - sRNA 6.13041 kcal/mol@LB@@LB@Position - mRNA 276 -- 295@LB@Position - sRNA 26 -- 46@LB@Position Seed - mRNA 289 -- 295@LB@Position Seed - sRNA 26 -- 32@LB@ |