79 |
0.004357 |
0.1855 |
b0008 |
talB |
-10.61 |
0.106795 |
240 -- 280 |
50 -- 88 |
transaldolase B |
|
_____________239________________________________________281\n_____________|__________________________________________|\n5'-AGG...CCACC___G_________________C___GC___AAUGAA______UCAAC...CAA-3'\n______________GUA_UG_GCCGACACUGGGGA_AUC__GGC______GCUGUA\n______________:||_||_|||:||||::||||_|||__|||______||:|||\n______________UAU_AC_CGGUUGUGGUCCCU_UAG__CCG______CGGCAU\n3'-UUU...GCGCU___G__G______________U___AA___ACG_________UUAAU...GUG-5'\n_____________|__________________________________________|\n_____________89_________________________________________49\n |
253 -- 259 |
68 -- 74 |
-44.9099 kcal/mol |
17.4497 kcal/mol |
16.8544 kcal/mol |
239 281@LB@ | |@LB@5'-AGG...CCACC G C GC AAUGAA UCAAC...CAA-3'@LB@ GUA UG GCCGACACUGGGGA AUC GGC GCUGUA@LB@ :|| || |||:||||::|||| ||| ||| ||:|||@LB@ UAU AC CGGUUGUGGUCCCU UAG CCG CGGCAU@LB@3'-UUU...GCGCU G G U AA ACG UUAAU...GUG-5'@LB@ | |@LB@ 89 49@LB@@LB@@LB@Energy -10.61 kcal/mol@LB@Hybridization Energy -44.9099 kcal/mol@LB@Unfolding Energy - mRNA 17.4497 kcal/mol@LB@Unfolding Energy - sRNA 16.8544 kcal/mol@LB@@LB@Position - mRNA 240 -- 280@LB@Position - sRNA 50 -- 88@LB@Position Seed - mRNA 253 -- 259@LB@Position Seed - sRNA 68 -- 74@LB@ |
47 |
0.002359 |
0.1727 |
b1520 |
yneE |
-16.33 |
0.007995 |
225 -- 237 |
50 -- 62 |
bestrophin family putative inner membrane protein |
|
_____________224___________238\n_____________|_____________|\n5'-CGU...AACAC_____________UUUUU...UCU-3'\n______________UGGCUGCGCCGUA\n______________|||||||||||||\n______________ACCGACGCGGCAU\n3'-UUU...UUAGA_____________UUAAU...GUG-5'\n_____________|_____________|\n_____________63____________49\n |
231 -- 237 |
50 -- 56 |
-27.5123 kcal/mol |
5.30923 kcal/mol |
5.87004 kcal/mol |
224 238@LB@ | |@LB@5'-CGU...AACAC UUUUU...UCU-3'@LB@ UGGCUGCGCCGUA@LB@ |||||||||||||@LB@ ACCGACGCGGCAU@LB@3'-UUU...UUAGA UUAAU...GUG-5'@LB@ | |@LB@ 63 49@LB@@LB@@LB@Energy -16.33 kcal/mol@LB@Hybridization Energy -27.5123 kcal/mol@LB@Unfolding Energy - mRNA 5.30923 kcal/mol@LB@Unfolding Energy - sRNA 5.87004 kcal/mol@LB@@LB@Position - mRNA 225 -- 237@LB@Position - sRNA 50 -- 62@LB@Position Seed - mRNA 231 -- 237@LB@Position Seed - sRNA 50 -- 56@LB@ |
148 |
0.008708 |
0.2059 |
b1754 |
ynjB |
-13.35 |
0.031185 |
160 -- 171 |
50 -- 61 |
putative ABC transporter periplasmic binding protein |
|
_____________159__________172\n_____________|____________|\n5'-CCG...UCAGG____________UUCCU...AAA-3'\n______________GGCUGUGCCGUA\n______________|||||:||||||\n______________CCGACGCGGCAU\n3'-UUU...UAGAA____________UUAAU...GUG-5'\n_____________|____________|\n_____________62___________49\n |
165 -- 171 |
50 -- 56 |
-23.078 kcal/mol |
3.86799 kcal/mol |
5.86332 kcal/mol |
159 172@LB@ | |@LB@5'-CCG...UCAGG UUCCU...AAA-3'@LB@ GGCUGUGCCGUA@LB@ |||||:||||||@LB@ CCGACGCGGCAU@LB@3'-UUU...UAGAA UUAAU...GUG-5'@LB@ | |@LB@ 62 49@LB@@LB@@LB@Energy -13.35 kcal/mol@LB@Hybridization Energy -23.078 kcal/mol@LB@Unfolding Energy - mRNA 3.86799 kcal/mol@LB@Unfolding Energy - sRNA 5.86332 kcal/mol@LB@@LB@Position - mRNA 160 -- 171@LB@Position - sRNA 50 -- 61@LB@Position Seed - mRNA 165 -- 171@LB@Position Seed - sRNA 50 -- 56@LB@ |
104 |
0.005642 |
0.1855 |
b1476 |
fdnI |
-8.74 |
0.236866 |
280 -- 291 |
51 -- 62 |
formate dehydrogenase-N cytochrome B556 (gamma) subunit nitrate-inducible |
|
_____________279__________292\n_____________|____________|\n5'-CGU...CUUCC____G_______CCGGG...UUU-3'\n______________UGGU_GCGCUGU\n______________|||:_||||:||\n______________ACCG_CGCGGCA\n3'-UUU...UUAGA____A_______UUUAA...GUG-5'\n_____________|____________|\n_____________63___________50\n |
285 -- 291 |
51 -- 57 |
-16.7644 kcal/mol |
3.14516 kcal/mol |
4.8826 kcal/mol |
279 292@LB@ | |@LB@5'-CGU...CUUCC G CCGGG...UUU-3'@LB@ UGGU GCGCUGU@LB@ |||: ||||:||@LB@ ACCG CGCGGCA@LB@3'-UUU...UUAGA A UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -8.74 kcal/mol@LB@Hybridization Energy -16.7644 kcal/mol@LB@Unfolding Energy - mRNA 3.14516 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 280 -- 291@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 285 -- 291@LB@Position Seed - sRNA 51 -- 57@LB@ |
60 |
0.003031 |
0.1727 |
b3432 |
glgB |
-10.57 |
0.108575 |
114 -- 123 |
51 -- 60 |
1 4-alpha-glucan branching enzyme |
|
_____________113________124\n_____________|__________|\n5'-CAU...AGAGU__________UCAGG...GAC-3'\n______________GCUGCGCCGU\n______________||||||||||\n______________CGACGCGGCA\n3'-UUU...AGAAC__________UUUAA...GUG-5'\n_____________|__________|\n_____________61_________50\n |
117 -- 123 |
51 -- 57 |
-20.705 kcal/mol |
5.26394 kcal/mol |
4.87294 kcal/mol |
113 124@LB@ | |@LB@5'-CAU...AGAGU UCAGG...GAC-3'@LB@ GCUGCGCCGU@LB@ ||||||||||@LB@ CGACGCGGCA@LB@3'-UUU...AGAAC UUUAA...GUG-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -10.57 kcal/mol@LB@Hybridization Energy -20.705 kcal/mol@LB@Unfolding Energy - mRNA 5.26394 kcal/mol@LB@Unfolding Energy - sRNA 4.87294 kcal/mol@LB@@LB@Position - mRNA 114 -- 123@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 117 -- 123@LB@Position Seed - sRNA 51 -- 57@LB@ |
73 |
0.003782 |
0.1804 |
b3560 |
glyQ |
-10.80 |
0.098141 |
7 -- 31 |
51 -- 74 |
glycine tRNA synthetase alpha subunit |
|
_____________6__________________________32\n_____________|__________________________|\n_____5'-ACAGUU____________A__AAA_____G__UAUAC...UGG-3'\n______________CCAGGGAAG_CU_UG___UGCGC_GU\n______________||||||||:_||_||___|||||_||\n______________GGUCCCUUU_GA_AC___ACGCG_CA\n3'-UUU...GUUGU_________A_____CG______G__UUUAA...GUG-5'\n_____________|__________________________|\n_____________75_________________________50\n |
9 -- 15 |
66 -- 72 |
-27.2651 kcal/mol |
7.67928 kcal/mol |
8.78847 kcal/mol |
6 32@LB@ | |@LB@ 5'-ACAGUU A AAA G UAUAC...UGG-3'@LB@ CCAGGGAAG CU UG UGCGC GU@LB@ ||||||||: || || ||||| ||@LB@ GGUCCCUUU GA AC ACGCG CA@LB@3'-UUU...GUUGU A CG G UUUAA...GUG-5'@LB@ | |@LB@ 75 50@LB@@LB@@LB@Energy -10.80 kcal/mol@LB@Hybridization Energy -27.2651 kcal/mol@LB@Unfolding Energy - mRNA 7.67928 kcal/mol@LB@Unfolding Energy - sRNA 8.78847 kcal/mol@LB@@LB@Position - mRNA 7 -- 31@LB@Position - sRNA 51 -- 74@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 66 -- 72@LB@ |
124 |
0.006738 |
0.1913 |
b2533 |
suhB |
-10.44 |
0.114821 |
158 -- 166 |
51 -- 59 |
inositol monophosphatase |
|
_____________157_______167\n_____________|_________|\n5'-UUG...AUACU_________UUUCC...AGA-3'\n______________CUGCGCCGU\n______________|||||||||\n______________GACGCGGCA\n3'-UUU...GAACC_________UUUAA...GUG-5'\n_____________|_________|\n_____________60________50\n |
160 -- 166 |
51 -- 57 |
-17.2912 kcal/mol |
2.02049 kcal/mol |
4.83013 kcal/mol |
157 167@LB@ | |@LB@5'-UUG...AUACU UUUCC...AGA-3'@LB@ CUGCGCCGU@LB@ |||||||||@LB@ GACGCGGCA@LB@3'-UUU...GAACC UUUAA...GUG-5'@LB@ | |@LB@ 60 50@LB@@LB@@LB@Energy -10.44 kcal/mol@LB@Hybridization Energy -17.2912 kcal/mol@LB@Unfolding Energy - mRNA 2.02049 kcal/mol@LB@Unfolding Energy - sRNA 4.83013 kcal/mol@LB@@LB@Position - mRNA 158 -- 166@LB@Position - sRNA 51 -- 59@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 51 -- 57@LB@ |
175 |
0.01031 |
0.2074 |
b1834 |
yebT |
-10.32 |
0.121003 |
270 -- 282 |
51 -- 62 |
MCE domain protein |
|
_____________269___________283\n_____________|_____________|\n5'-UCU...CUUUC_______U_____UCAUC...UUG-3'\n______________UGGCUGC_GCCGU\n______________|||||||_|||||\n______________ACCGACG_CGGCA\n3'-UUU...UUAGA_____________UUUAA...GUG-5'\n_____________|_____________|\n_____________63____________50\n |
270 -- 276 |
56 -- 62 |
-21.4836 kcal/mol |
6.28034 kcal/mol |
4.8826 kcal/mol |
269 283@LB@ | |@LB@5'-UCU...CUUUC U UCAUC...UUG-3'@LB@ UGGCUGC GCCGU@LB@ ||||||| |||||@LB@ ACCGACG CGGCA@LB@3'-UUU...UUAGA UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -10.32 kcal/mol@LB@Hybridization Energy -21.4836 kcal/mol@LB@Unfolding Energy - mRNA 6.28034 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 270 -- 282@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 56 -- 62@LB@ |
3 |
3.071e-06 |
0.003055 |
b2100 |
yegV |
-9.35 |
0.183884 |
5 -- 14 |
51 -- 60 |
putative kinase |
|
_____________4__________15\n_____________|__________|\n_______5'-AAUC__________CCUGU...CUU-3'\n______________GCUGCGCCGU\n______________||||||||||\n______________CGACGCGGCA\n3'-UUU...AGAAC__________UUUAA...GUG-5'\n_____________|__________|\n_____________61_________50\n |
8 -- 14 |
51 -- 57 |
-21.1769 kcal/mol |
6.95722 kcal/mol |
4.87294 kcal/mol |
4 15@LB@ | |@LB@ 5'-AAUC CCUGU...CUU-3'@LB@ GCUGCGCCGU@LB@ ||||||||||@LB@ CGACGCGGCA@LB@3'-UUU...AGAAC UUUAA...GUG-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -9.35 kcal/mol@LB@Hybridization Energy -21.1769 kcal/mol@LB@Unfolding Energy - mRNA 6.95722 kcal/mol@LB@Unfolding Energy - sRNA 4.87294 kcal/mol@LB@@LB@Position - mRNA 5 -- 14@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 8 -- 14@LB@Position Seed - sRNA 51 -- 57@LB@ |
127 |
0.007097 |
0.1961 |
b4065 |
yjcE |
-10.62 |
0.105957 |
81 -- 91 |
51 -- 62 |
putative cation/proton antiporter |
|
_____________80___________92\n_____________|____________|\n5'-UAU...GGCAA____________UUUUA...UGC-3'\n______________UGGCUGC_CCGU\n______________|||||||_||||\n______________ACCGACG_GGCA\n3'-UUU...UUAGA_______C____UUUAA...GUG-5'\n_____________|____________|\n_____________63___________50\n |
81 -- 87 |
56 -- 62 |
-18.8543 kcal/mol |
3.34811 kcal/mol |
4.8826 kcal/mol |
80 92@LB@ | |@LB@5'-UAU...GGCAA UUUUA...UGC-3'@LB@ UGGCUGC CCGU@LB@ ||||||| ||||@LB@ ACCGACG GGCA@LB@3'-UUU...UUAGA C UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -10.62 kcal/mol@LB@Hybridization Energy -18.8543 kcal/mol@LB@Unfolding Energy - mRNA 3.34811 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 81 -- 91@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 81 -- 87@LB@Position Seed - sRNA 56 -- 62@LB@ |