| 156 |
0.006066 |
0.137 |
b0005 |
yaaX |
-9.16 |
0.170742 |
96 -- 118 |
53 -- 73 |
DUF2502 family putative periplasmic protein |
b2390 |
_____________95______________________119\n_____________|_______________________|\n5'-UCU...AAUAA_________C_______UU____UUGCG...AAU-3'\n______________AUGCGGUAA_UUAGAGA__AGGA\n______________||||:||||_|:|:|:|__||||\n______________UACGUCAUU_AGUUUUU__UCCU\n3'-UUU...CACGA_________A_____________UCAUU...ACG-5'\n_____________|_______________________|\n_____________74______________________52\n |
98 -- 104 |
65 -- 71 |
-18.9701 kcal/mol |
6.27714 kcal/mol |
3.52907 kcal/mol |
95 119@LB@ | |@LB@5'-UCU...AAUAA C UU UUGCG...AAU-3'@LB@ AUGCGGUAA UUAGAGA AGGA@LB@ ||||:|||| |:|:|:| ||||@LB@ UACGUCAUU AGUUUUU UCCU@LB@3'-UUU...CACGA A UCAUU...ACG-5'@LB@ | |@LB@ 74 52@LB@@LB@@LB@Energy -9.16 kcal/mol@LB@Hybridization Energy -18.9701 kcal/mol@LB@Unfolding Energy - mRNA 6.27714 kcal/mol@LB@Unfolding Energy - sRNA 3.52907 kcal/mol@LB@@LB@Position - mRNA 96 -- 118@LB@Position - sRNA 53 -- 73@LB@Position Seed - mRNA 98 -- 104@LB@Position Seed - sRNA 65 -- 71@LB@ |
| 69 |
0.001222 |
0.06239 |
b0699 |
ybfA |
-13.19 |
0.016050 |
183 -- 205 |
37 -- 62 |
DUF2517 family protein |
|
_____________182________________________206\n_____________|__________________________|\n5'-AUG...AGAUA____________AAA___________ACUCU...GGA-3'\n______________CAAAAGGGGGAG______AGUAUGGA\n______________|||||::||:||______|:||||||\n______________GUUUUUUCCUUC______UUAUACCU\n3'-UUU...AUUAA____________AUUCUG________CGCGU...ACG-5'\n_____________|__________________________|\n_____________63_________________________36\n |
199 -- 205 |
37 -- 43 |
-21.7 kcal/mol |
3.27833 kcal/mol |
5.2343 kcal/mol |
182 206@LB@ | |@LB@5'-AUG...AGAUA AAA ACUCU...GGA-3'@LB@ CAAAAGGGGGAG AGUAUGGA@LB@ |||||::||:|| |:||||||@LB@ GUUUUUUCCUUC UUAUACCU@LB@3'-UUU...AUUAA AUUCUG CGCGU...ACG-5'@LB@ | |@LB@ 63 36@LB@@LB@@LB@Energy -13.19 kcal/mol@LB@Hybridization Energy -21.7 kcal/mol@LB@Unfolding Energy - mRNA 3.27833 kcal/mol@LB@Unfolding Energy - sRNA 5.2343 kcal/mol@LB@@LB@Position - mRNA 183 -- 205@LB@Position - sRNA 37 -- 62@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 187 |
0.008226 |
0.1545 |
b1446 |
ydcY |
-8.50 |
0.236240 |
3 -- 9 |
2 -- 8 |
DUF2526 family protein |
|
_____________2_______10\n_____________|_______|\n_________5'-UA_______GUUUC...ACG-3'\n______________UCACCUG\n______________|||||||\n______________AGUGGAC\n3'-UUU...ACGUA_______G-5'\n_____________|_______|\n_____________9_______1\n |
3 -- 9 |
2 -- 8 |
-11.529 kcal/mol |
0.673638 kcal/mol |
2.36182 kcal/mol |
2 10@LB@ | |@LB@ 5'-UA GUUUC...ACG-3'@LB@ UCACCUG@LB@ |||||||@LB@ AGUGGAC@LB@3'-UUU...ACGUA G-5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -8.50 kcal/mol@LB@Hybridization Energy -11.529 kcal/mol@LB@Unfolding Energy - mRNA 0.673638 kcal/mol@LB@Unfolding Energy - sRNA 2.36182 kcal/mol@LB@@LB@Position - mRNA 3 -- 9@LB@Position - sRNA 2 -- 8@LB@Position Seed - mRNA 3 -- 9@LB@Position Seed - sRNA 2 -- 8@LB@ |
| 171 |
0.006844 |
0.141 |
b4537 |
yecJ |
-11.04 |
0.061373 |
25 -- 77 |
39 -- 91 |
DUF2766 family protein |
|
_____________24_______________________________________________________78\n_____________|________________________________________________________|\n5'-UGA...GAAAA_____U______AA_____U___A__AC_________CGUACCGCC__________UUCCG...CGC-3'\n______________GUAUG__UCAAU____CUA_UGC_AG__GUUCAAAGA_________AGGCAAUAUG\n______________|||:|__|||||____|||_|||_||__:||||||:|_________||:|||||||\n______________CAUGC__AGUUA____GAU_ACG_UC__UAAGUUUUU_________UCUGUUAUAC\n3'-UUU...CGCAG_____UU_____ACAC__________AU_________UCCUUCAU___________CUCGC...ACG-5'\n_____________|________________________________________________________|\n_____________92_______________________________________________________38\n |
71 -- 77 |
39 -- 45 |
-28.4449 kcal/mol |
10.572 kcal/mol |
6.83352 kcal/mol |
24 78@LB@ | |@LB@5'-UGA...GAAAA U AA U A AC CGUACCGCC UUCCG...CGC-3'@LB@ GUAUG UCAAU CUA UGC AG GUUCAAAGA AGGCAAUAUG@LB@ |||:| ||||| ||| ||| || :||||||:| ||:|||||||@LB@ CAUGC AGUUA GAU ACG UC UAAGUUUUU UCUGUUAUAC@LB@3'-UUU...CGCAG UU ACAC AU UCCUUCAU CUCGC...ACG-5'@LB@ | |@LB@ 92 38@LB@@LB@@LB@Energy -11.04 kcal/mol@LB@Hybridization Energy -28.4449 kcal/mol@LB@Unfolding Energy - mRNA 10.572 kcal/mol@LB@Unfolding Energy - sRNA 6.83352 kcal/mol@LB@@LB@Position - mRNA 25 -- 77@LB@Position - sRNA 39 -- 91@LB@Position Seed - mRNA 71 -- 77@LB@Position Seed - sRNA 39 -- 45@LB@ |
| 35 |
0.0002679 |
0.02697 |
b2152 |
yeiB |
-13.89 |
0.009991 |
187 -- 220 |
20 -- 59 |
DUF418 family putative inner membrane protein |
|
_____________186______________________________________221\n_____________|________________________________________|\n5'-GCU...UGAUU______C_______ACC________________A______CGAUU...AUC-3'\n______________AAAAGG____AGGA____AUGGAGCGCAACGUC___CGCU\n______________||||||____|:||____|||||||||||||:|___||||\n______________UUUUCC____UUCU____UACCUCGCGUUGCGG___GCGA\n3'-UUU...AAGUU______UUCA____GUUA_______________GUA____ACUGC...ACG-5'\n_____________|________________________________________|\n_____________60_______________________________________19\n |
209 -- 215 |
27 -- 33 |
-38.6917 kcal/mol |
10.9969 kcal/mol |
13.8113 kcal/mol |
186 221@LB@ | |@LB@5'-GCU...UGAUU C ACC A CGAUU...AUC-3'@LB@ AAAAGG AGGA AUGGAGCGCAACGUC CGCU@LB@ |||||| |:|| |||||||||||||:| ||||@LB@ UUUUCC UUCU UACCUCGCGUUGCGG GCGA@LB@3'-UUU...AAGUU UUCA GUUA GUA ACUGC...ACG-5'@LB@ | |@LB@ 60 19@LB@@LB@@LB@Energy -13.89 kcal/mol@LB@Hybridization Energy -38.6917 kcal/mol@LB@Unfolding Energy - mRNA 10.9969 kcal/mol@LB@Unfolding Energy - sRNA 13.8113 kcal/mol@LB@@LB@Position - mRNA 187 -- 220@LB@Position - sRNA 20 -- 59@LB@Position Seed - mRNA 209 -- 215@LB@Position Seed - sRNA 27 -- 33@LB@ |
| 155 |
0.006038 |
0.137 |
b4374 |
yjjG |
-10.88 |
0.067155 |
203 -- 266 |
1 -- 54 |
dUMP phosphatase |
|
_____________202_____________________________________________________________________267\n_____________|_______________________________________________________________________|\n5'-CUG...AUAAU__________________UUUUCUUU______G__GAAA____GUUUACCUU____U___________G__CUGCA...CCU-3'\n______________GAAGUGGGAC____UGGA________GAUGCC_AU____CGCU_________UGAC____CAUUCACC_GC\n______________|||||::|||____||||________:|:|||_||____||||_________||||____||||||||_||\n______________CUUCAUUCUG____ACCU________UUGCGG_UA____GCGA_________ACUG____GUAAGUGG_CG\n3'-UUU...UUUUC__________UUAU____CGCG__________G_______________________CAAC________A__-5'\n_____________|______________________________________________________________________|\n_____________55_____________________________________________________________________1\n |
257 -- 263 |
4 -- 10 |
-41.6423 kcal/mol |
13.9643 kcal/mol |
16.8 kcal/mol |
202 267@LB@ | |@LB@5'-CUG...AUAAU UUUUCUUU G GAAA GUUUACCUU U G CUGCA...CCU-3'@LB@ GAAGUGGGAC UGGA GAUGCC AU CGCU UGAC CAUUCACC GC@LB@ |||||::||| |||| :|:||| || |||| |||| |||||||| ||@LB@ CUUCAUUCUG ACCU UUGCGG UA GCGA ACUG GUAAGUGG CG@LB@3'-UUU...UUUUC UUAU CGCG G CAAC A -5'@LB@ | |@LB@ 55 1@LB@@LB@@LB@Energy -10.88 kcal/mol@LB@Hybridization Energy -41.6423 kcal/mol@LB@Unfolding Energy - mRNA 13.9643 kcal/mol@LB@Unfolding Energy - sRNA 16.8 kcal/mol@LB@@LB@Position - mRNA 203 -- 266@LB@Position - sRNA 1 -- 54@LB@Position Seed - mRNA 257 -- 263@LB@Position Seed - sRNA 4 -- 10@LB@ |
| 55 |
0.0007336 |
0.04699 |
b0585 |
fes |
-14.13 |
0.008457 |
197 -- 228 |
46 -- 77 |
enterobactin/ferrienterobactin esterase |
|
_____________196________________________________229\n_____________|__________________________________|\n5'-CAU...GGUUA__G____A___CG_________U___________GCUGG...GGU-3'\n______________UG_UGUG_CGG____UUAAAAG_AGGAAGUGAGA\n______________||_|:||_|:|____|:||||:_|||||||:|||\n______________AC_AUAC_GUC____AGUUUUU_UCCUUCAUUCU\n3'-UUU...UUAAC__G________AUUA___________________GUUAU...ACG-5'\n_____________|__________________________________|\n_____________78_________________________________45\n |
222 -- 228 |
46 -- 52 |
-26.4508 kcal/mol |
7.03406 kcal/mol |
5.29333 kcal/mol |
196 229@LB@ | |@LB@5'-CAU...GGUUA G A CG U GCUGG...GGU-3'@LB@ UG UGUG CGG UUAAAAG AGGAAGUGAGA@LB@ || |:|| |:| |:||||: |||||||:|||@LB@ AC AUAC GUC AGUUUUU UCCUUCAUUCU@LB@3'-UUU...UUAAC G AUUA GUUAU...ACG-5'@LB@ | |@LB@ 78 45@LB@@LB@@LB@Energy -14.13 kcal/mol@LB@Hybridization Energy -26.4508 kcal/mol@LB@Unfolding Energy - mRNA 7.03406 kcal/mol@LB@Unfolding Energy - sRNA 5.29333 kcal/mol@LB@@LB@Position - mRNA 197 -- 228@LB@Position - sRNA 46 -- 77@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 46 -- 52@LB@ |
| 127 |
0.004567 |
0.1258 |
b2320 |
pdxB |
-8.62 |
0.223386 |
291 -- 299 |
20 -- 28 |
erythronate-4-phosphate dehydrogenase |
|
_____________290_______300\n_____________|_________|\n5'-ACG...CAAUC_________C-3'\n______________CCCGUCGCU\n______________|||:|||||\n______________GGGUAGCGA\n3'-UUU...GUUGC_________ACUGC...ACG-5'\n_____________|_________|\n_____________29________19\n |
293 -- 299 |
20 -- 26 |
-15.7186 kcal/mol |
1.54056 kcal/mol |
5.56153 kcal/mol |
290 300@LB@ | |@LB@5'-ACG...CAAUC C-3'@LB@ CCCGUCGCU@LB@ |||:|||||@LB@ GGGUAGCGA@LB@3'-UUU...GUUGC ACUGC...ACG-5'@LB@ | |@LB@ 29 19@LB@@LB@@LB@Energy -8.62 kcal/mol@LB@Hybridization Energy -15.7186 kcal/mol@LB@Unfolding Energy - mRNA 1.54056 kcal/mol@LB@Unfolding Energy - sRNA 5.56153 kcal/mol@LB@@LB@Position - mRNA 291 -- 299@LB@Position - sRNA 20 -- 28@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 20 -- 26@LB@ |
| 41 |
0.0003478 |
0.02948 |
b1478 |
adhP |
-14.79 |
0.005262 |
167 -- 196 |
51 -- 77 |
ethanol-active dehydrogenase/acetaldehyde-active reductase |
|
_____________166____________________________197\n_____________|______________________________|\n5'-GCA...UCACC__________AACA___UCC__________AACUA...GUU-3'\n______________UGCUAUGCAG____UCA___GAAAAGGAGG\n______________||||||||||____|||___:|||||||:|\n______________ACGAUACGUC____AGU___UUUUUCCUUC\n3'-UUU...UUAAC__________AUUA________________AUUCU...ACG-5'\n_____________|______________________________|\n_____________78_____________________________50\n |
190 -- 196 |
51 -- 57 |
-28.1635 kcal/mol |
8.82843 kcal/mol |
4.54711 kcal/mol |
166 197@LB@ | |@LB@5'-GCA...UCACC AACA UCC AACUA...GUU-3'@LB@ UGCUAUGCAG UCA GAAAAGGAGG@LB@ |||||||||| ||| :|||||||:|@LB@ ACGAUACGUC AGU UUUUUCCUUC@LB@3'-UUU...UUAAC AUUA AUUCU...ACG-5'@LB@ | |@LB@ 78 50@LB@@LB@@LB@Energy -14.79 kcal/mol@LB@Hybridization Energy -28.1635 kcal/mol@LB@Unfolding Energy - mRNA 8.82843 kcal/mol@LB@Unfolding Energy - sRNA 4.54711 kcal/mol@LB@@LB@Position - mRNA 167 -- 196@LB@Position - sRNA 51 -- 77@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 120 |
0.004053 |
0.119 |
b2441 |
eutB |
-6.09 |
0.606518 |
293 -- 299 |
73 -- 79 |
ethanolamine ammonia-lyase large subunit heavy chain |
|
_____________292_____300\n_____________|_______|\n5'-CUG...GGGGA_______G-3'\n______________UGUGCUG\n______________||||||:\n______________ACACGAU\n3'-UUU...AGUUA_______ACGUC...ACG-5'\n_____________|_______|\n_____________80______72\n |
293 -- 299 |
73 -- 79 |
-8.7652 kcal/mol |
1.34517 kcal/mol |
1.33434 kcal/mol |
292 300@LB@ | |@LB@5'-CUG...GGGGA G-3'@LB@ UGUGCUG@LB@ ||||||:@LB@ ACACGAU@LB@3'-UUU...AGUUA ACGUC...ACG-5'@LB@ | |@LB@ 80 72@LB@@LB@@LB@Energy -6.09 kcal/mol@LB@Hybridization Energy -8.7652 kcal/mol@LB@Unfolding Energy - mRNA 1.34517 kcal/mol@LB@Unfolding Energy - sRNA 1.33434 kcal/mol@LB@@LB@Position - mRNA 293 -- 299@LB@Position - sRNA 73 -- 79@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 73 -- 79@LB@ |
