3 |
9.453e-06 |
0.01014 |
b0681 |
chiP |
-16.40 |
0.001982 |
182 -- 193 |
45 -- 56 |
chitoporin uptake of chitosugars |
|
_____________181__________194\n_____________|____________|\n5'-CUU...UUAUA____________UUAAC...AAG-3'\n______________CGUCAAAGAGGA\n______________||||||||||||\n______________GCAGUUUCUCCU\n3'-UUU...ACCGG____________UAAAG...ACA-5'\n_____________|____________|\n_____________57___________44\n |
187 -- 193 |
45 -- 51 |
-19.4659 kcal/mol |
2.1233 kcal/mol |
0.938337 kcal/mol |
181 194@LB@ | |@LB@5'-CUU...UUAUA UUAAC...AAG-3'@LB@ CGUCAAAGAGGA@LB@ ||||||||||||@LB@ GCAGUUUCUCCU@LB@3'-UUU...ACCGG UAAAG...ACA-5'@LB@ | |@LB@ 57 44@LB@@LB@@LB@Energy -16.40 kcal/mol@LB@Hybridization Energy -19.4659 kcal/mol@LB@Unfolding Energy - mRNA 2.1233 kcal/mol@LB@Unfolding Energy - sRNA 0.938337 kcal/mol@LB@@LB@Position - mRNA 182 -- 193@LB@Position - sRNA 45 -- 56@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 45 -- 51@LB@ |
144 |
0.02798 |
0.6177 |
b0682 |
chiQ |
-9.70 |
0.047426 |
184 -- 197 |
41 -- 56 |
chitosugar-induced verified lipoprotein |
|
_____________183______________198\n_____________|________________|\n5'-CGG...CCGCA____U___________GCUAU...ACA-3'\n______________CGUU___GAGGAAUUU\n______________|||:___|||||||||\n______________GCAG___CUCCUUAAA\n3'-UUU...ACCGG____UUU_________GUAAA...ACA-5'\n_____________|________________|\n_____________57_______________40\n |
191 -- 197 |
41 -- 47 |
-13.1137 kcal/mol |
2.46147 kcal/mol |
0.955312 kcal/mol |
183 198@LB@ | |@LB@5'-CGG...CCGCA U GCUAU...ACA-3'@LB@ CGUU GAGGAAUUU@LB@ |||: |||||||||@LB@ GCAG CUCCUUAAA@LB@3'-UUU...ACCGG UUU GUAAA...ACA-5'@LB@ | |@LB@ 57 40@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -13.1137 kcal/mol@LB@Unfolding Energy - mRNA 2.46147 kcal/mol@LB@Unfolding Energy - sRNA 0.955312 kcal/mol@LB@@LB@Position - mRNA 184 -- 197@LB@Position - sRNA 41 -- 56@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 41 -- 47@LB@ |
178 |
0.03627 |
0.6177 |
b0924 |
mukB |
-9.59 |
0.049840 |
186 -- 195 |
44 -- 53 |
chromosome condensin MukBEF ATPase and DNA-binding subunit |
|
_____________185________196\n_____________|__________|\n5'-UGG...GAUAG__________GAAUA...CUG-3'\n______________CGGAGAGGAA\n______________|::|||||||\n______________GUUUCUCCUU\n3'-UUU...GGGCA__________AAAGU...ACA-5'\n_____________|__________|\n_____________54_________43\n |
189 -- 195 |
44 -- 50 |
-13.8471 kcal/mol |
3.32824 kcal/mol |
0.927997 kcal/mol |
185 196@LB@ | |@LB@5'-UGG...GAUAG GAAUA...CUG-3'@LB@ CGGAGAGGAA@LB@ |::|||||||@LB@ GUUUCUCCUU@LB@3'-UUU...GGGCA AAAGU...ACA-5'@LB@ | |@LB@ 54 43@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -13.8471 kcal/mol@LB@Unfolding Energy - mRNA 3.32824 kcal/mol@LB@Unfolding Energy - sRNA 0.927997 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 44 -- 53@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 44 -- 50@LB@ |
4 |
0.0002658 |
0.2138 |
b1040 |
csgD |
-11.06 |
0.024985 |
185 -- 199 |
38 -- 52 |
csgBAC operon transcriptional regulator |
|
_____________184_____________200\n_____________|_______________|\n5'-UUA...UAAAA____C__________CAUGU...CGC-3'\n______________AAAG_GGGGUUUCAU\n______________||||_||::||||||\n______________UUUC_CCUUAAAGUA\n3'-UUU...GGCAG____U__________AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
193 -- 199 |
38 -- 44 |
-14.3947 kcal/mol |
2.26766 kcal/mol |
1.0693 kcal/mol |
184 200@LB@ | |@LB@5'-UUA...UAAAA C CAUGU...CGC-3'@LB@ AAAG GGGGUUUCAU@LB@ |||| ||::||||||@LB@ UUUC CCUUAAAGUA@LB@3'-UUU...GGCAG U AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -11.06 kcal/mol@LB@Hybridization Energy -14.3947 kcal/mol@LB@Unfolding Energy - mRNA 2.26766 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 185 -- 199@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 38 -- 44@LB@ |
164 |
0.03346 |
0.6177 |
b1449 |
curA |
-5.87 |
0.264423 |
114 -- 122 |
45 -- 53 |
curcumin/dihydrocurcumin reductase NADPH-dependent |
|
_____________113_______123\n_____________|_________|\n5'-CGG...UGUUG_________UGUGA...UCG-3'\n______________CAGAGGGGA\n______________||:||:|||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
116 -- 122 |
45 -- 51 |
-11.6619 kcal/mol |
4.87234 kcal/mol |
0.917553 kcal/mol |
113 123@LB@ | |@LB@5'-CGG...UGUUG UGUGA...UCG-3'@LB@ CAGAGGGGA@LB@ ||:||:|||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -5.87 kcal/mol@LB@Hybridization Energy -11.6619 kcal/mol@LB@Unfolding Energy - mRNA 4.87234 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 114 -- 122@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 116 -- 122@LB@Position Seed - sRNA 45 -- 51@LB@ |
150 |
0.03022 |
0.6177 |
b1285 |
gmr |
-9.04 |
0.064446 |
208 -- 218 |
47 -- 57 |
cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability |
|
_____________207_________219\n_____________|___________|\n5'-UUU...GAAAA___________UCCAC...CUA-3'\n______________CCGUUAGGGAG\n______________||||:|::|||\n______________GGCAGUUUCUC\n3'-UUU...AACCG___________CUUAA...ACA-5'\n_____________|___________|\n_____________58__________46\n |
212 -- 218 |
47 -- 53 |
-14.7452 kcal/mol |
2.96952 kcal/mol |
2.73556 kcal/mol |
207 219@LB@ | |@LB@5'-UUU...GAAAA UCCAC...CUA-3'@LB@ CCGUUAGGGAG@LB@ ||||:|::|||@LB@ GGCAGUUUCUC@LB@3'-UUU...AACCG CUUAA...ACA-5'@LB@ | |@LB@ 58 46@LB@@LB@@LB@Energy -9.04 kcal/mol@LB@Hybridization Energy -14.7452 kcal/mol@LB@Unfolding Energy - mRNA 2.96952 kcal/mol@LB@Unfolding Energy - sRNA 2.73556 kcal/mol@LB@@LB@Position - mRNA 208 -- 218@LB@Position - sRNA 47 -- 57@LB@Position Seed - mRNA 212 -- 218@LB@Position Seed - sRNA 47 -- 53@LB@ |
1 |
0 |
0 |
b0481 |
ybaK |
-91.37 |
0.000000 |
1 -- 79 |
1 -- 79 |
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase |
|
______________1______________________________________________________________________________80\n______________|______________________________________________________________________________|\n___________5'-_______________________________________________________________________________AACUC...UCG-3'\n______________AAUGGCCAAUAUCGCUAUUGGCCCGUCAAAGAGGAAUUUCAUUUUUUUAUUAUUAUGCCGUCACUUUAAGCGACGGUGU\n______________|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||\n______________UUACCGGUUAUAGCGAUAACCGGGCAGUUUCUCCUUAAAGUAAAAAAAUAAUAAUACGGCAGUGAAAUUCGCUGCCACA\n______3'-UUUUU_______________________________________________________________________________-5'\n_____________|______________________________________________________________________________|\n_____________80_____________________________________________________________________________1\n |
51 -- 57 |
23 -- 29 |
-143.199 kcal/mol |
26.5504 kcal/mol |
25.2758 kcal/mol |
1 80@LB@ | |@LB@ 5'- AACUC...UCG-3'@LB@ AAUGGCCAAUAUCGCUAUUGGCCCGUCAAAGAGGAAUUUCAUUUUUUUAUUAUUAUGCCGUCACUUUAAGCGACGGUGU@LB@ |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||@LB@ UUACCGGUUAUAGCGAUAACCGGGCAGUUUCUCCUUAAAGUAAAAAAAUAAUAAUACGGCAGUGAAAUUCGCUGCCACA@LB@ 3'-UUUUU -5'@LB@ | |@LB@ 80 1@LB@@LB@@LB@Energy -91.37 kcal/mol@LB@Hybridization Energy -143.199 kcal/mol@LB@Unfolding Energy - mRNA 26.5504 kcal/mol@LB@Unfolding Energy - sRNA 25.2758 kcal/mol@LB@@LB@Position - mRNA 1 -- 79@LB@Position - sRNA 1 -- 79@LB@Position Seed - mRNA 51 -- 57@LB@Position Seed - sRNA 23 -- 29@LB@ |
24 |
0.004602 |
0.5992 |
b0526 |
cysS |
-10.20 |
0.037463 |
234 -- 245 |
41 -- 52 |
cysteinyl-tRNA synthetase |
|
_____________233__________246\n_____________|____________|\n5'-GCC...GCCAA____________AAGCC...ACG-3'\n______________AAAGAGGAAUUU\n______________||||||||||||\n______________UUUCUCCUUAAA\n3'-UUU...GGCAG____________GUAAA...ACA-5'\n_____________|____________|\n_____________53___________40\n |
239 -- 245 |
41 -- 47 |
-14.6017 kcal/mol |
3.53507 kcal/mol |
0.867487 kcal/mol |
233 246@LB@ | |@LB@5'-GCC...GCCAA AAGCC...ACG-3'@LB@ AAAGAGGAAUUU@LB@ ||||||||||||@LB@ UUUCUCCUUAAA@LB@3'-UUU...GGCAG GUAAA...ACA-5'@LB@ | |@LB@ 53 40@LB@@LB@@LB@Energy -10.20 kcal/mol@LB@Hybridization Energy -14.6017 kcal/mol@LB@Unfolding Energy - mRNA 3.53507 kcal/mol@LB@Unfolding Energy - sRNA 0.867487 kcal/mol@LB@@LB@Position - mRNA 234 -- 245@LB@Position - sRNA 41 -- 52@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 41 -- 47@LB@ |
169 |
0.03425 |
0.6177 |
b0336 |
codB |
-12.15 |
0.014930 |
188 -- 202 |
38 -- 52 |
cytosine transporter |
|
_____________187_____________203\n_____________|_______________|\n5'-CCA...GCAAA_______________GUCGC...UUU-3'\n______________AAGGGGGAAUUUCGU\n______________||:|:||||||||:|\n______________UUUCUCCUUAAAGUA\n3'-UUU...GGCAG_______________AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
196 -- 202 |
38 -- 44 |
-18.3448 kcal/mol |
5.13025 kcal/mol |
1.0693 kcal/mol |
187 203@LB@ | |@LB@5'-CCA...GCAAA GUCGC...UUU-3'@LB@ AAGGGGGAAUUUCGU@LB@ ||:|:||||||||:|@LB@ UUUCUCCUUAAAGUA@LB@3'-UUU...GGCAG AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -12.15 kcal/mol@LB@Hybridization Energy -18.3448 kcal/mol@LB@Unfolding Energy - mRNA 5.13025 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 188 -- 202@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 38 -- 44@LB@ |
157 |
0.03134 |
0.6177 |
b4086 |
alsC |
-8.98 |
0.066369 |
183 -- 191 |
45 -- 53 |
D-allose ABC transporter permease |
|
_____________182_______192\n_____________|_________|\n5'-CGC...AUGAG_________GAUUA...CGA-3'\n______________CGAAGAGGA\n______________|:|||||||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
185 -- 191 |
45 -- 51 |
-13.528 kcal/mol |
3.63363 kcal/mol |
0.917553 kcal/mol |
182 192@LB@ | |@LB@5'-CGC...AUGAG GAUUA...CGA-3'@LB@ CGAAGAGGA@LB@ |:|||||||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -8.98 kcal/mol@LB@Hybridization Energy -13.528 kcal/mol@LB@Unfolding Energy - mRNA 3.63363 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 183 -- 191@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 45 -- 51@LB@ |