| 21 |
0.004054 |
0.5992 |
b2076 |
mdtC |
-11.67 |
0.018717 |
158 -- 193 |
45 -- 78 |
multidrug efflux system subunit C |
|
_____________157____________________________________194\n_____________|______________________________________|\n5'-CUC...GCAUU____A____AAGC____UU__________UG_______GGCGU...CGG-3'\n______________GUGG_CCAA____CGCU____GCCCGUCA__AAGAGGA\n______________:|||_||||____||||____||||||||__|||||||\n______________UACC_GGUU____GCGA____CGGGCAGU__UUCUCCU\n_____3'-UUUUUU_________AUA_____UAAC_________________UAAAG...ACA-5'\n_____________|______________________________________|\n_____________79_____________________________________44\n |
187 -- 193 |
45 -- 51 |
-37.8051 kcal/mol |
12.6053 kcal/mol |
13.5316 kcal/mol |
157 194@LB@ | |@LB@5'-CUC...GCAUU A AAGC UU UG GGCGU...CGG-3'@LB@ GUGG CCAA CGCU GCCCGUCA AAGAGGA@LB@ :||| |||| |||| |||||||| |||||||@LB@ UACC GGUU GCGA CGGGCAGU UUCUCCU@LB@ 3'-UUUUUU AUA UAAC UAAAG...ACA-5'@LB@ | |@LB@ 79 44@LB@@LB@@LB@Energy -11.67 kcal/mol@LB@Hybridization Energy -37.8051 kcal/mol@LB@Unfolding Energy - mRNA 12.6053 kcal/mol@LB@Unfolding Energy - sRNA 13.5316 kcal/mol@LB@@LB@Position - mRNA 158 -- 193@LB@Position - sRNA 45 -- 78@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 45 -- 51@LB@ |
| 22 |
0.004195 |
0.5992 |
b3715 |
yieH |
-7.44 |
0.134211 |
287 -- 299 |
41 -- 55 |
phosphoenolpyruvate and 6-phosphogluconate phosphatase |
|
_____________286_____________300\n_____________|_______________|\n5'-CUG...ACGAU___UC__________G-3'\n______________GUU____AGGAAUUU\n______________||:____||||||||\n______________CAG____UCCUUAAA\n3'-UUU...CCGGG___UUUC________GUAAA...ACA-5'\n_____________|_______________|\n_____________56______________40\n |
293 -- 299 |
41 -- 47 |
-8.9861 kcal/mol |
0.60049 kcal/mol |
0.947844 kcal/mol |
286 300@LB@ | |@LB@5'-CUG...ACGAU UC G-3'@LB@ GUU AGGAAUUU@LB@ ||: ||||||||@LB@ CAG UCCUUAAA@LB@3'-UUU...CCGGG UUUC GUAAA...ACA-5'@LB@ | |@LB@ 56 40@LB@@LB@@LB@Energy -7.44 kcal/mol@LB@Hybridization Energy -8.9861 kcal/mol@LB@Unfolding Energy - mRNA 0.60049 kcal/mol@LB@Unfolding Energy - sRNA 0.947844 kcal/mol@LB@@LB@Position - mRNA 287 -- 299@LB@Position - sRNA 41 -- 55@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 23 |
0.004411 |
0.5992 |
b3390 |
aroK |
-10.22 |
0.037117 |
283 -- 298 |
39 -- 54 |
shikimate kinase I |
|
_____________282______________299\n_____________|________________|\n5'-UGG...ACAAC____UAU_________CG-3'\n______________UCAA___GGAAUUUUA\n______________||||___|||||||:|\n______________AGUU___CCUUAAAGU\n3'-UUU...CGGGC____UCU_________AAAAA...ACA-5'\n_____________|________________|\n_____________55_______________38\n |
292 -- 298 |
39 -- 45 |
-11.8677 kcal/mol |
0.499768 kcal/mol |
1.1491 kcal/mol |
282 299@LB@ | |@LB@5'-UGG...ACAAC UAU CG-3'@LB@ UCAA GGAAUUUUA@LB@ |||| |||||||:|@LB@ AGUU CCUUAAAGU@LB@3'-UUU...CGGGC UCU AAAAA...ACA-5'@LB@ | |@LB@ 55 38@LB@@LB@@LB@Energy -10.22 kcal/mol@LB@Hybridization Energy -11.8677 kcal/mol@LB@Unfolding Energy - mRNA 0.499768 kcal/mol@LB@Unfolding Energy - sRNA 1.1491 kcal/mol@LB@@LB@Position - mRNA 283 -- 298@LB@Position - sRNA 39 -- 54@LB@Position Seed - mRNA 292 -- 298@LB@Position Seed - sRNA 39 -- 45@LB@ |
| 24 |
0.004602 |
0.5992 |
b0526 |
cysS |
-10.20 |
0.037463 |
234 -- 245 |
41 -- 52 |
cysteinyl-tRNA synthetase |
|
_____________233__________246\n_____________|____________|\n5'-GCC...GCCAA____________AAGCC...ACG-3'\n______________AAAGAGGAAUUU\n______________||||||||||||\n______________UUUCUCCUUAAA\n3'-UUU...GGCAG____________GUAAA...ACA-5'\n_____________|____________|\n_____________53___________40\n |
239 -- 245 |
41 -- 47 |
-14.6017 kcal/mol |
3.53507 kcal/mol |
0.867487 kcal/mol |
233 246@LB@ | |@LB@5'-GCC...GCCAA AAGCC...ACG-3'@LB@ AAAGAGGAAUUU@LB@ ||||||||||||@LB@ UUUCUCCUUAAA@LB@3'-UUU...GGCAG GUAAA...ACA-5'@LB@ | |@LB@ 53 40@LB@@LB@@LB@Energy -10.20 kcal/mol@LB@Hybridization Energy -14.6017 kcal/mol@LB@Unfolding Energy - mRNA 3.53507 kcal/mol@LB@Unfolding Energy - sRNA 0.867487 kcal/mol@LB@@LB@Position - mRNA 234 -- 245@LB@Position - sRNA 41 -- 52@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 25 |
0.004737 |
0.5992 |
b1093 |
fabG |
-11.25 |
0.022809 |
188 -- 202 |
38 -- 52 |
3-oxoacyl-[acyl-carrier-protein] reductase |
|
_____________187_____________203\n_____________|_______________|\n5'-UAC...CUUUA_________AA____GAAUU...UUG-3'\n______________AAAGAGGAA__UCAU\n______________|||||||||__||||\n______________UUUCUCCUU__AGUA\n3'-UUU...GGCAG_________AA____AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
190 -- 196 |
44 -- 50 |
-14.2885 kcal/mol |
1.96871 kcal/mol |
1.0693 kcal/mol |
187 203@LB@ | |@LB@5'-UAC...CUUUA AA GAAUU...UUG-3'@LB@ AAAGAGGAA UCAU@LB@ ||||||||| ||||@LB@ UUUCUCCUU AGUA@LB@3'-UUU...GGCAG AA AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -11.25 kcal/mol@LB@Hybridization Energy -14.2885 kcal/mol@LB@Unfolding Energy - mRNA 1.96871 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 188 -- 202@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 26 |
0.004859 |
0.5992 |
b1753 |
ynjA |
-8.90 |
0.068656 |
186 -- 195 |
43 -- 52 |
carboxymuconolactone decarboxylase family protein |
|
_____________185________196\n_____________|__________|\n5'-ACU...CGCCA__________GCCUG...GGU-3'\n______________GAAGAGGAAU\n______________:|||||||||\n______________UUUCUCCUUA\n3'-UUU...GGCAG__________AAGUA...ACA-5'\n_____________|__________|\n_____________53_________42\n |
189 -- 195 |
43 -- 49 |
-11.6028 kcal/mol |
1.83308 kcal/mol |
0.865937 kcal/mol |
185 196@LB@ | |@LB@5'-ACU...CGCCA GCCUG...GGU-3'@LB@ GAAGAGGAAU@LB@ :|||||||||@LB@ UUUCUCCUUA@LB@3'-UUU...GGCAG AAGUA...ACA-5'@LB@ | |@LB@ 53 42@LB@@LB@@LB@Energy -8.90 kcal/mol@LB@Hybridization Energy -11.6028 kcal/mol@LB@Unfolding Energy - mRNA 1.83308 kcal/mol@LB@Unfolding Energy - sRNA 0.865937 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 43 -- 52@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 43 -- 49@LB@ |
| 27 |
0.005027 |
0.5992 |
b3745 |
viaA |
-10.46 |
0.033099 |
243 -- 253 |
42 -- 52 |
stimulator of RavA ATPase activity; von Willebrand factor domain protein |
|
_____________242_________254\n_____________|___________|\n5'-ACG...UCAGC___________GAUCG...CGG-3'\n______________GAAGAGGGAUU\n______________:||||||:|||\n______________UUUCUCCUUAA\n3'-UUU...GGCAG___________AGUAA...ACA-5'\n_____________|___________|\n_____________53__________41\n |
247 -- 253 |
42 -- 48 |
-12.7293 kcal/mol |
1.40033 kcal/mol |
0.866923 kcal/mol |
242 254@LB@ | |@LB@5'-ACG...UCAGC GAUCG...CGG-3'@LB@ GAAGAGGGAUU@LB@ :||||||:|||@LB@ UUUCUCCUUAA@LB@3'-UUU...GGCAG AGUAA...ACA-5'@LB@ | |@LB@ 53 41@LB@@LB@@LB@Energy -10.46 kcal/mol@LB@Hybridization Energy -12.7293 kcal/mol@LB@Unfolding Energy - mRNA 1.40033 kcal/mol@LB@Unfolding Energy - sRNA 0.866923 kcal/mol@LB@@LB@Position - mRNA 243 -- 253@LB@Position - sRNA 42 -- 52@LB@Position Seed - mRNA 247 -- 253@LB@Position Seed - sRNA 42 -- 48@LB@ |
| 28 |
0.005242 |
0.6024 |
b0785 |
moaE |
-11.01 |
0.025514 |
211 -- 232 |
52 -- 74 |
molybdopterin synthase large subunit |
|
_____________210_____________________233\n_____________|_______________________|\n5'-AGA...AGAAA____A__________________GCCGU...CCU-3'\n______________CCAA_AUUGUUGUUGGUCCG_CA\n______________||||_||:|:|:||||:|||_||\n______________GGUU_UAGCGAUAACCGGGC_GU\n3'-UUU...UUACC____A_______________A__UUCUC...ACA-5'\n_____________|_______________________|\n_____________75______________________51\n |
216 -- 222 |
63 -- 69 |
-28.4518 kcal/mol |
6.10798 kcal/mol |
11.3304 kcal/mol |
210 233@LB@ | |@LB@5'-AGA...AGAAA A GCCGU...CCU-3'@LB@ CCAA AUUGUUGUUGGUCCG CA@LB@ |||| ||:|:|:||||:||| ||@LB@ GGUU UAGCGAUAACCGGGC GU@LB@3'-UUU...UUACC A A UUCUC...ACA-5'@LB@ | |@LB@ 75 51@LB@@LB@@LB@Energy -11.01 kcal/mol@LB@Hybridization Energy -28.4518 kcal/mol@LB@Unfolding Energy - mRNA 6.10798 kcal/mol@LB@Unfolding Energy - sRNA 11.3304 kcal/mol@LB@@LB@Position - mRNA 211 -- 232@LB@Position - sRNA 52 -- 74@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 63 -- 69@LB@ |
| 29 |
0.005664 |
0.6127 |
b3831 |
udp |
-8.88 |
0.069383 |
184 -- 196 |
42 -- 54 |
uridine phosphorylase |
|
_____________183___________197\n_____________|_____________|\n5'-AUC...CCGAU___C_________GUAUA...AGA-3'\n______________UCA_AGAGGAGUU\n______________|||_||||||:||\n______________AGU_UCUCCUUAA\n3'-UUU...CGGGC___U_________AGUAA...ACA-5'\n_____________|_____________|\n_____________55____________41\n |
190 -- 196 |
42 -- 48 |
-14.4874 kcal/mol |
4.66075 kcal/mol |
0.945538 kcal/mol |
183 197@LB@ | |@LB@5'-AUC...CCGAU C GUAUA...AGA-3'@LB@ UCA AGAGGAGUU@LB@ ||| ||||||:||@LB@ AGU UCUCCUUAA@LB@3'-UUU...CGGGC U AGUAA...ACA-5'@LB@ | |@LB@ 55 41@LB@@LB@@LB@Energy -8.88 kcal/mol@LB@Hybridization Energy -14.4874 kcal/mol@LB@Unfolding Energy - mRNA 4.66075 kcal/mol@LB@Unfolding Energy - sRNA 0.945538 kcal/mol@LB@@LB@Position - mRNA 184 -- 196@LB@Position - sRNA 42 -- 54@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 42 -- 48@LB@ |
| 30 |
0.005789 |
0.6127 |
b2688 |
gshA |
-11.51 |
0.020183 |
254 -- 264 |
45 -- 55 |
glutamate-cysteine ligase |
|
_____________253_________265\n_____________|___________|\n5'-UGU...CAGGC___________UACAG...UUA-3'\n______________GUUAAAGGGGA\n______________||:||||:|||\n______________CAGUUUCUCCU\n3'-UUU...CCGGG___________UAAAG...ACA-5'\n_____________|___________|\n_____________56__________44\n |
258 -- 264 |
45 -- 51 |
-13.8935 kcal/mol |
1.45381 kcal/mol |
0.930875 kcal/mol |
253 265@LB@ | |@LB@5'-UGU...CAGGC UACAG...UUA-3'@LB@ GUUAAAGGGGA@LB@ ||:||||:|||@LB@ CAGUUUCUCCU@LB@3'-UUU...CCGGG UAAAG...ACA-5'@LB@ | |@LB@ 56 44@LB@@LB@@LB@Energy -11.51 kcal/mol@LB@Hybridization Energy -13.8935 kcal/mol@LB@Unfolding Energy - mRNA 1.45381 kcal/mol@LB@Unfolding Energy - sRNA 0.930875 kcal/mol@LB@@LB@Position - mRNA 254 -- 264@LB@Position - sRNA 45 -- 55@LB@Position Seed - mRNA 258 -- 264@LB@Position Seed - sRNA 45 -- 51@LB@ |
